Free for academic non-profit institutions. Other users need a Commercial license

Aliases for ARHGEF7-AS2 Gene

Subcategory (RNA class) for ARHGEF7-AS2 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ARHGEF7-AS2 Gene

  • ARHGEF7 Antisense RNA 2 2 3 5
  • ARHGEF7 Antisense RNA 2 (Non-Protein Coding) 2

External Ids for ARHGEF7-AS2 Gene

Previous GeneCards Identifiers for ARHGEF7-AS2 Gene

  • GC00U933604
  • GC13M111767

Summaries for ARHGEF7-AS2 Gene

GeneCards Summary for ARHGEF7-AS2 Gene

ARHGEF7-AS2 (ARHGEF7 Antisense RNA 2) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ARHGEF7-AS2 Gene

Genomics for ARHGEF7-AS2 Gene

Regulatory Elements for ARHGEF7-AS2 Gene

Enhancers for ARHGEF7-AS2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13F111183 1.5 FANTOM5 Ensembl ENCODE 10.7 -71.8 -71819 8.2 HDGF TBP PKNOX1 TBL1XR1 WRNIP1 SIN3A ZBTB40 ELK1 SCRT2 ETV6 ARHGEF7 ARHGEF7-AS2 ING1 SALL4P4 GC13P111283
GH13F111152 1.1 ENCODE 11.6 -38.2 -38180 3.6 CREB3L1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 ZNF143 ZNF207 ZNF263 ANKRD10-IT1 ARHGEF7 ARHGEF7-AS2 LOC101060553 SALL4P4
GH13F111164 1.1 FANTOM5 Ensembl ENCODE 11.1 -51.0 -51007 4.7 PKNOX1 SMARCA4 POLR2A IKZF1 ARHGEF7 ARHGEF7-AS2 CARS2 ING1 ANKRD10 LOC101060553 SALL4P4
GH13F111175 0.9 Ensembl ENCODE 11 -62.9 -62923 6.8 CTCF PKNOX1 MAX REST ZNF316 SMARCA4 POLR2A MLLT1 FOXP2 MAFK ARHGEF7 ARHGEF7-AS2 TEX29 SALL4P4 LOC101060553
GH13F111113 0.8 ENCODE 11.3 -0.5 -547 4.5 CTCF SUZ12 ZNF76 FEZF1 RAD21 ZNF664 GLIS2 ZNF366 POLR2A ZBTB20 ARHGEF7-AS2 LINC00368 ARHGEF7-IT1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ARHGEF7-AS2 on UCSC Golden Path with GeneCards custom track

Promoters for ARHGEF7-AS2 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001036771 78 2001 SUZ12 ZNF76 FEZF1 RAD21 ZNF664 GLIS2 POLR2A ZBTB20 EZH2 RNF2

Genomic Location for ARHGEF7-AS2 Gene

Chromosome:
13
Start:
111,113,812 bp from pter
End:
111,115,678 bp from pter
Size:
1,867 bases
Orientation:
Minus strand

Genomic View for ARHGEF7-AS2 Gene

Genes around ARHGEF7-AS2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ARHGEF7-AS2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ARHGEF7-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ARHGEF7-AS2 Gene

Proteins for ARHGEF7-AS2 Gene

Post-translational modifications for ARHGEF7-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ARHGEF7-AS2 Gene

Domains & Families for ARHGEF7-AS2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ARHGEF7-AS2 Gene

Function for ARHGEF7-AS2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ARHGEF7-AS2 Gene

Localization for ARHGEF7-AS2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ARHGEF7-AS2 Gene

Pathways & Interactions for ARHGEF7-AS2 Gene

SuperPathways for ARHGEF7-AS2 Gene

No Data Available

Interacting Proteins for ARHGEF7-AS2 Gene

Gene Ontology (GO) - Biological Process for ARHGEF7-AS2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ARHGEF7-AS2 Gene

Transcripts for ARHGEF7-AS2 Gene

mRNA/cDNA for ARHGEF7-AS2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ARHGEF7-AS2 Gene

No ASD Table

Relevant External Links for ARHGEF7-AS2 Gene

GeneLoc Exon Structure for
ARHGEF7-AS2
ECgene alternative splicing isoforms for
ARHGEF7-AS2

Expression for ARHGEF7-AS2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ARHGEF7-AS2 Gene

genes like me logo Genes that share expression patterns with ARHGEF7-AS2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for ARHGEF7-AS2 Gene

Orthologs for ARHGEF7-AS2 Gene

Evolution for ARHGEF7-AS2 Gene

ENSEMBL:
Gene Tree for ARHGEF7-AS2 (if available)
TreeFam:
Gene Tree for ARHGEF7-AS2 (if available)

No data available for Orthologs for ARHGEF7-AS2 Gene

Paralogs for ARHGEF7-AS2 Gene

No data available for Paralogs for ARHGEF7-AS2 Gene

Variants for ARHGEF7-AS2 Gene

Sequence variations from dbSNP and Humsavar for ARHGEF7-AS2 Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type
rs111246635 -- 111,114,770(+) TGCCG(A/G)TGAGG nc-transcript-variant, upstream-variant-2KB, utr-variant-5-prime
rs111777458 -- 111,114,496(+) CATTT(C/T)TTCCT nc-transcript-variant, upstream-variant-2KB
rs111803982 -- 111,116,242(+) CACCT(A/G)TCCGA intron-variant, upstream-variant-2KB
rs114410176 -- 111,113,429(+) GGAAA(A/G)TTTAA downstream-variant-500B, upstream-variant-2KB
rs115798143 -- 111,114,276(+) CCGGC(A/G)GAAGG nc-transcript-variant, upstream-variant-2KB

Relevant External Links for ARHGEF7-AS2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ARHGEF7-AS2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ARHGEF7-AS2 Gene

Disorders for ARHGEF7-AS2 Gene

Relevant External Links for ARHGEF7-AS2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ARHGEF7-AS2

No disorders were found for ARHGEF7-AS2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ARHGEF7-AS2 Gene

Publications for ARHGEF7-AS2 Gene

No publications were found for ARHGEF7-AS2 Gene.

Products for ARHGEF7-AS2 Gene

Sources for ARHGEF7-AS2 Gene

Content
Loading form....