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Aliases for ARHGEF34P Gene

Aliases for ARHGEF34P Gene

  • Rho Guanine Nucleotide Exchange Factor 34, Pseudogene 2 3 5
  • Rho Guanine Nucleotide Exchange Factor (GEF) 34, Pseudogene 2

External Ids for ARHGEF34P Gene

Previous GeneCards Identifiers for ARHGEF34P Gene

  • GC07M143959

Summaries for ARHGEF34P Gene

GeneCards Summary for ARHGEF34P Gene

ARHGEF34P (Rho Guanine Nucleotide Exchange Factor 34, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ARHGEF34P Gene

Genomics for ARHGEF34P Gene

Regulatory Elements for ARHGEF34P Gene

Enhancers for ARHGEF34P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07G144383 1 Ensembl ENCODE 9.3 -98.4 -98440 3.9 ZNF140 KLF17 CEBPG FOSL1 ZNF121 HIC1 EED CREM MAZ L3MBTL2 ARHGEF34P OR2A1-AS1 OR2A20P LOC154761 NOBOX
GH07G143898 1.7 FANTOM5 Ensembl ENCODE 3.9 +383.8 383810 9.0 HDGF PKNOX1 FOXA2 MLX CREB3L1 ARNT ZFP64 ARID4B SIN3A FEZF1 ARHGEF35 OR2A13P TCAF1 OR2A25 OR2A12 ARHGEF34P OR2A2 OR2F1
GH07G144391 0.9 Ensembl ENCODE 4.3 -105.1 -105050 0.4 CTCF ZNF654 ZNF362 FOXA2 FOXA3 TRIM22 REST RAD21 FOXA1 JUND ARHGEF34P OR2A20P NOBOX OR2A1-AS1
GH07G144437 0.5 ENCODE 5.5 -150.8 -150837 0.2 CTCF ZNF654 SMC3 REST RAD21 ARHGEF34P ENSG00000242978 GC07P144452
GH07G144352 0.4 Ensembl 6.6 -65.7 -65747 0.6 ZNF316 MAFG ARHGEF34P ARHGEF5 OR2A1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ARHGEF34P on UCSC Golden Path with GeneCards custom track

Genomic Location for ARHGEF34P Gene

Chromosome:
7
Start:
144,258,996 bp from pter
End:
144,286,966 bp from pter
Size:
27,971 bases
Orientation:
Minus strand

Genomic View for ARHGEF34P Gene

Genes around ARHGEF34P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ARHGEF34P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ARHGEF34P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ARHGEF34P Gene

Proteins for ARHGEF34P Gene

Post-translational modifications for ARHGEF34P Gene

No Post-translational modifications

No data available for DME Specific Peptides for ARHGEF34P Gene

Domains & Families for ARHGEF34P Gene

Gene Families for ARHGEF34P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with ARHGEF34P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ARHGEF34P Gene

Function for ARHGEF34P Gene

Phenotypes for ARHGEF34P Gene

GenomeRNAi human phenotypes for ARHGEF34P:
genes like me logo Genes that share phenotypes with ARHGEF34P: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ARHGEF34P Gene

Localization for ARHGEF34P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ARHGEF34P Gene

Pathways & Interactions for ARHGEF34P Gene

SuperPathways for ARHGEF34P Gene

No Data Available

Interacting Proteins for ARHGEF34P Gene

Gene Ontology (GO) - Biological Process for ARHGEF34P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ARHGEF34P Gene

Drugs & Compounds for ARHGEF34P Gene

No Compound Related Data Available

Transcripts for ARHGEF34P Gene

mRNA/cDNA for ARHGEF34P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ARHGEF34P Gene

No ASD Table

Relevant External Links for ARHGEF34P Gene

GeneLoc Exon Structure for
ARHGEF34P
ECgene alternative splicing isoforms for
ARHGEF34P

Expression for ARHGEF34P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ARHGEF34P Gene

mRNA differential expression in normal tissues according to GTEx for ARHGEF34P Gene

This gene is overexpressed in Skin - Sun Exposed (Lower leg) (x4.8), Skin - Not Sun Exposed (Suprapubic) (x4.3), and Esophagus - Mucosa (x4.1).

NURSA nuclear receptor signaling pathways regulating expression of ARHGEF34P Gene:

ARHGEF34P
genes like me logo Genes that share expression patterns with ARHGEF34P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ARHGEF34P Gene

Orthologs for ARHGEF34P Gene

Evolution for ARHGEF34P Gene

ENSEMBL:
Gene Tree for ARHGEF34P (if available)
TreeFam:
Gene Tree for ARHGEF34P (if available)

No data available for Orthologs for ARHGEF34P Gene

Paralogs for ARHGEF34P Gene

No data available for Paralogs for ARHGEF34P Gene

Variants for ARHGEF34P Gene

Sequence variations from dbSNP and Humsavar for ARHGEF34P Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
rs1002833548 -- 144,273,031(+) TTTCT(A/G)CATTC intron-variant
rs1003190781 -- 144,272,103(+) GTCTT(C/T)GAGCT intron-variant
rs1005232829 -- 144,263,675(+) AATGA(A/G)TTATG intron-variant
rs1006678756 -- 144,271,363(+) GGGGA(A/G)CTCCC intron-variant, upstream-variant-2KB
rs1006867232 -- 144,265,062(+) AACTC(C/T)ATTTA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ARHGEF34P Gene

Variant ID Type Subtype PubMed ID
dgv11668n54 CNV gain 21841781
dgv11669n54 CNV loss 21841781
dgv11682n54 CNV loss 21841781
dgv11683n54 CNV loss 21841781
dgv11684n54 CNV loss 21841781
dgv11685n54 CNV loss 21841781
dgv152e203 CNV gain+loss 21179565
dgv24n31 CNV gain 19718026
dgv253n111 CNV duplication 26073780
dgv254n111 CNV duplication 26073780
dgv255n111 CNV deletion 26073780
dgv3972e59 CNV duplication 20981092
dgv3973e59 CNV duplication 20981092
dgv3974e59 CNV duplication 20981092
dgv6726n100 CNV gain 25217958
dgv6727n100 CNV loss 25217958
dgv6728n100 CNV gain+loss 25217958
dgv6729n100 CNV gain 25217958
dgv6730n100 CNV loss 25217958
dgv6731n100 CNV gain+loss 25217958
dgv6732n100 CNV gain+loss 25217958
dgv6733n100 CNV gain+loss 25217958
dgv6734n100 CNV gain+loss 25217958
dgv6735n100 CNV gain 25217958
dgv6736n100 CNV gain 25217958
dgv6737n100 CNV gain 25217958
dgv6738n100 CNV gain+loss 25217958
dgv6739n100 CNV gain+loss 25217958
dgv6740n100 CNV loss 25217958
dgv6741n100 CNV loss 25217958
dgv6742n100 CNV loss 25217958
dgv6743n100 CNV gain+loss 25217958
dgv6744n100 CNV loss 25217958
dgv6745n100 CNV loss 25217958
esv1003295 OTHER inversion 20482838
esv1682998 OTHER inversion 17803354
esv24292 CNV gain+loss 19812545
esv2759570 CNV gain+loss 17122850
esv3380478 CNV duplication 20981092
esv3381247 CNV duplication 20981092
esv3396483 CNV duplication 20981092
esv3409556 CNV duplication 20981092
esv3412618 CNV duplication 20981092
esv3432947 CNV duplication 20981092
esv3438610 CNV duplication 20981092
esv3584873 CNV loss 24956385
esv3891225 CNV gain 25118596
esv8347 OTHER inversion 19470904
nsv1016831 CNV gain 25217958
nsv1110499 CNV duplication 24896259
nsv1119235 CNV duplication 24896259
nsv1133019 OTHER inversion 24896259
nsv1141559 CNV duplication 24896259
nsv1153905 CNV duplication 26484159
nsv428188 CNV gain+loss 18775914
nsv433394 CNV gain 18776910
nsv469769 CNV gain+loss 16826518
nsv471646 CNV gain+loss 15918152
nsv508489 CNV deletion 20534489
nsv510970 OTHER inversion 20534489
nsv515041 CNV gain 21397061
nsv608699 CNV gain 21841781
nsv608829 CNV loss 21841781
nsv608830 CNV loss 21841781
nsv608831 CNV loss 21841781
nsv608840 CNV loss 21841781
nsv608841 CNV loss 21841781
nsv608845 CNV loss 21841781
nsv7411 OTHER inversion 18451855
nsv819701 CNV insertion 19587683
nsv821609 CNV duplication 20802225
nsv8227 CNV gain+loss 18304495
nsv824360 CNV gain 20364138
nsv831175 CNV loss 17160897
nsv970598 CNV duplication 23825009
nsv970599 CNV duplication 23825009
nsv981601 CNV duplication 23825009

Relevant External Links for ARHGEF34P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ARHGEF34P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ARHGEF34P Gene

Disorders for ARHGEF34P Gene

Relevant External Links for ARHGEF34P

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ARHGEF34P

No disorders were found for ARHGEF34P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ARHGEF34P Gene

Publications for ARHGEF34P Gene

  1. Lineage-specific gene duplication and loss in human and great ape evolution. (PMID: 15252450) Fortna A. … Sikela J.M. (PLoS Biol. 2004) 3 64
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64
  3. Toward a complete human genome sequence. (PMID: 9847074) Sulston J.E. … Waterston R. (Genome Res. 1998) 3 64

Products for ARHGEF34P Gene

Sources for ARHGEF34P Gene

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