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Aliases for ARHGEF33 Gene

Aliases for ARHGEF33 Gene

  • Rho Guanine Nucleotide Exchange Factor (GEF) 33 2 3

External Ids for ARHGEF33 Gene

Previous GeneCards Identifiers for ARHGEF33 Gene

  • GC02P039118

Summaries for ARHGEF33 Gene

GeneCards Summary for ARHGEF33 Gene

ARHGEF33 (Rho Guanine Nucleotide Exchange Factor (GEF) 33) is a Protein Coding gene. GO annotations related to this gene include Rho guanyl-nucleotide exchange factor activity.

UniProtKB/Swiss-Prot for ARHGEF33 Gene

  • May act as a guanine-nucleotide releasing factor.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ARHGEF33 Gene

Genomics for ARHGEF33 Gene

Genomic Location for ARHGEF33 Gene

Chromosome:
2
Start:
38,889,880 bp from pter
End:
38,975,449 bp from pter
Size:
85,570 bases
Orientation:
Plus strand

Genomic View for ARHGEF33 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ARHGEF33 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ARHGEF33 Gene

No data available for Regulatory Elements for ARHGEF33 Gene

Proteins for ARHGEF33 Gene

  • Protein details for ARHGEF33 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A8MVX0-ARG33_HUMAN
    Recommended name:
    Rho guanine nucleotide exchange factor 33
    Protein Accession:
    A8MVX0
    Secondary Accessions:
    • J3KPX2

    Protein attributes for ARHGEF33 Gene

    Size:
    844 amino acids
    Molecular mass:
    94633 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=DV080278; Type=Frameshift; Positions=79; Evidence={ECO:0000305};

    Alternative splice isoforms for ARHGEF33 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ARHGEF33 Gene

Proteomics data for ARHGEF33 Gene at MOPED

Post-translational modifications for ARHGEF33 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ARHGEF33 Gene

No data available for DME Specific Peptides for ARHGEF33 Gene

Domains & Families for ARHGEF33 Gene

Gene Families for ARHGEF33 Gene

Protein Domains for ARHGEF33 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for ARHGEF33 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

A8MVX0

UniProtKB/Swiss-Prot:

ARG33_HUMAN :
  • Contains 1 DH (DBL-homology) domain.
Domain:
  • Contains 1 DH (DBL-homology) domain.
genes like me logo Genes that share domains with ARHGEF33: view

Function for ARHGEF33 Gene

Molecular function for ARHGEF33 Gene

UniProtKB/Swiss-Prot Function:
May act as a guanine-nucleotide releasing factor.

Gene Ontology (GO) - Molecular Function for ARHGEF33 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005089 Rho guanyl-nucleotide exchange factor activity IEA --
genes like me logo Genes that share ontologies with ARHGEF33: view

Phenotypes for ARHGEF33 Gene

GenomeRNAi human phenotypes for ARHGEF33:
genes like me logo Genes that share phenotypes with ARHGEF33: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ARHGEF33

In Situ Assay Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Animal Models , Transcription Factor Targets and HOMER Transcription for ARHGEF33 Gene

Localization for ARHGEF33 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ARHGEF33 Gene

Pathways & Interactions for ARHGEF33 Gene

SuperPathways for ARHGEF33 Gene

No Data Available

Interacting Proteins for ARHGEF33 Gene

Gene Ontology (GO) - Biological Process for ARHGEF33 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0035023 regulation of Rho protein signal transduction IEA --
GO:0043547 positive regulation of GTPase activity IEA --
genes like me logo Genes that share ontologies with ARHGEF33: view

No data available for Pathways by source and SIGNOR curated interactions for ARHGEF33 Gene

Drugs & Compounds for ARHGEF33 Gene

No Compound Related Data Available

Transcripts for ARHGEF33 Gene

mRNA/cDNA for ARHGEF33 Gene

(1) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(8) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ARHGEF33 Gene

Rho guanine nucleotide exchange factor (GEF) 33:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ARHGEF33

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ARHGEF33 Gene

No ASD Table

Relevant External Links for ARHGEF33 Gene

GeneLoc Exon Structure for
ARHGEF33
ECgene alternative splicing isoforms for
ARHGEF33

Expression for ARHGEF33 Gene

mRNA expression in normal human tissues for ARHGEF33 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for ARHGEF33 Gene

This gene is overexpressed in Brain - Cerebellum (x12.1) and Brain - Cerebellar Hemisphere (x5.9).

Protein differential expression in normal tissues from HIPED for ARHGEF33 Gene

This gene is overexpressed in Urine (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for ARHGEF33 Gene



SOURCE GeneReport for Unigene cluster for ARHGEF33 Gene Hs.99841

genes like me logo Genes that share expression patterns with ARHGEF33: view

Protein tissue co-expression partners for ARHGEF33 Gene

- Elite partner

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA Expression by UniProt/SwissProt for ARHGEF33 Gene

Orthologs for ARHGEF33 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ARHGEF33 Gene

Organism Taxonomy Gene Similarity Type Details
dog
(Canis familiaris)
Mammalia ARHGEF33 35
  • 93.49 (n)
  • 95.86 (a)
ARHGEF33 36
  • 96 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Arhgef33 35
  • 88.34 (n)
  • 92.28 (a)
Arhgef33 16
Arhgef33 36
  • 90 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia ARHGEF33 35
  • 99.73 (n)
  • 99.43 (a)
ARHGEF33 36
  • 97 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Arhgef33 35
  • 86.81 (n)
  • 93.4 (a)
cow
(Bos Taurus)
Mammalia ARHGEF33 36
  • 86 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia ARHGEF33 36
  • 89 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia -- 36
  • 56 (a)
OneToMany
-- 36
  • 82 (a)
OneToMany
chicken
(Gallus gallus)
Aves ARHGEF33 35
  • 70.31 (n)
  • 69.23 (a)
ARHGEF33 36
  • 68 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia ARHGEF33 36
  • 65 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii ARHGEF33 36
  • 30 (a)
OneToOne
Species with no ortholog for ARHGEF33:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ARHGEF33 Gene

ENSEMBL:
Gene Tree for ARHGEF33 (if available)
TreeFam:
Gene Tree for ARHGEF33 (if available)

Paralogs for ARHGEF33 Gene

No data available for Paralogs for ARHGEF33 Gene

Variants for ARHGEF33 Gene

Sequence variations from dbSNP and Humsavar for ARHGEF33 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type MAF
rs3751 -- 38,973,057(-) GGGTA(A/C)TCCAT intron-variant
rs371745 -- 38,955,645(-) gcaag(C/T)gcctg intron-variant
rs373300 -- 38,927,322(-) AGAAT(A/C)AGGTC intron-variant
rs384007 -- 38,935,149(-) ccaat(A/G)gctcc intron-variant
rs384421 -- 38,935,003(-) CCCCC(A/G)TTGGT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ARHGEF33 Gene

Variant ID Type Subtype PubMed ID
nsv873884 CNV Loss 21882294
nsv873885 CNV Loss 21882294

Variation tolerance for ARHGEF33 Gene

Gene Damage Index Score: 2.15; 39.10% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for ARHGEF33 Gene

HapMap Linkage Disequilibrium report
ARHGEF33

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ARHGEF33 Gene

Disorders for ARHGEF33 Gene

Relevant External Links for ARHGEF33

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ARHGEF33
genes like me logo Genes that share disorders with ARHGEF33: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ARHGEF33 Gene

Publications for ARHGEF33 Gene

  1. Generation and annotation of the DNA sequences of human chromosomes 2 and 4. (PMID: 15815621) Hillier L.W. … Wilson R.K. (Nature 2005) 67
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 67

Products for ARHGEF33 Gene

Sources for ARHGEF33 Gene

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