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Aliases for ARHGEF3-AS1 Gene

Subcategory (RNA class) for ARHGEF3-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for ARHGEF3-AS1 Gene

  • ARHGEF3 Antisense RNA 1 2 3 5
  • ARHGEF3 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for ARHGEF3-AS1 Gene

Previous GeneCards Identifiers for ARHGEF3-AS1 Gene

  • GC00U933751

Summaries for ARHGEF3-AS1 Gene

GeneCards Summary for ARHGEF3-AS1 Gene

ARHGEF3-AS1 (ARHGEF3 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for ARHGEF3-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ARHGEF3-AS1 Gene

Genomics for ARHGEF3-AS1 Gene

Regulatory Elements for ARHGEF3-AS1 Gene

Enhancers for ARHGEF3-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03H056921 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -15.7 -15676 6.1 MAX PYGO2 ZNF7 POLR2A RUNX3 ZBTB20 ZNF639 RFX1 CAVIN1 ZNF740 CCDC66 FAM208A DENND6A APPL1 ARHGEF3 PDE12 GC03M056906 ARHGEF3-AS1
GH03H056927 1.3 Ensembl ENCODE dbSUPER 0.4 -10.6 -10551 3.8 NFIB RARA SCRT2 RCOR1 USF2 CEBPB NR2F2 ZNF217 NFIL3 GLIS1 ARHGEF3-AS1 GC03M056906
GH03H056915 1.4 Ensembl ENCODE dbSUPER 0.3 -22.9 -22895 4.2 HDGF PKNOX1 TBL1XR1 BMI1 BATF ZNF207 ATF7 ETV6 RUNX3 CREM ARHGEF3 GC03M056906 ARHGEF3-AS1
GH03H056976 1.1 Ensembl ENCODE dbSUPER 0.3 +37.2 37154 1.9 ZNF121 RFX1 ZNF341 ZNF140 FEZF1 ZNF600 PRDM10 ZBTB8A ZBTB20 CCDC66 FAM208A DENND6A ARHGEF3-AS1 SPATA12
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ARHGEF3-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ARHGEF3-AS1 Gene

Genomic Locations for ARHGEF3-AS1 Gene
20,815 bases
Plus strand

Genomic View for ARHGEF3-AS1 Gene

Genes around ARHGEF3-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ARHGEF3-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ARHGEF3-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ARHGEF3-AS1 Gene

Proteins for ARHGEF3-AS1 Gene

Post-translational modifications for ARHGEF3-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ARHGEF3-AS1 Gene

Domains & Families for ARHGEF3-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ARHGEF3-AS1 Gene

Function for ARHGEF3-AS1 Gene

Phenotypes From GWAS Catalog for ARHGEF3-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ARHGEF3-AS1 Gene

Localization for ARHGEF3-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ARHGEF3-AS1 Gene

Pathways & Interactions for ARHGEF3-AS1 Gene

SuperPathways for ARHGEF3-AS1 Gene

No Data Available

Interacting Proteins for ARHGEF3-AS1 Gene

Gene Ontology (GO) - Biological Process for ARHGEF3-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for ARHGEF3-AS1 Gene

Drugs & Compounds for ARHGEF3-AS1 Gene

No Compound Related Data Available

Transcripts for ARHGEF3-AS1 Gene

mRNA/cDNA for ARHGEF3-AS1 Gene

(1) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ARHGEF3-AS1 Gene

ARHGEF3 antisense RNA 1:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ARHGEF3-AS1 Gene

No ASD Table

Relevant External Links for ARHGEF3-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for ARHGEF3-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ARHGEF3-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for ARHGEF3-AS1 Gene

This gene is overexpressed in Testis (x48.1) and Kidney - Cortex (x4.9).

SOURCE GeneReport for Unigene cluster for ARHGEF3-AS1 Gene:

genes like me logo Genes that share expression patterns with ARHGEF3-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ARHGEF3-AS1 Gene

Orthologs for ARHGEF3-AS1 Gene

Evolution for ARHGEF3-AS1 Gene

Gene Tree for ARHGEF3-AS1 (if available)
Gene Tree for ARHGEF3-AS1 (if available)

No data available for Orthologs for ARHGEF3-AS1 Gene

Paralogs for ARHGEF3-AS1 Gene

No data available for Paralogs for ARHGEF3-AS1 Gene

Variants for ARHGEF3-AS1 Gene

Sequence variations from dbSNP and Humsavar for ARHGEF3-AS1 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs1000036886 -- 56,944,574(+) TTTTT(-/TTTTC)TTTTT intron-variant
rs1000107136 -- 56,949,734(+) CCATC(C/T)CCATC intron-variant
rs1000232963 -- 56,955,897(+) TGTGG(A/T)TTACA intron-variant
rs1000241801 -- 56,945,129(+) AAATT(A/G)CCAGG intron-variant
rs1000348468 -- 56,955,584(+) ATGTG(A/G)AAAAT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ARHGEF3-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv590363 CNV loss 21841781
esv3596221 CNV loss 21293372

Relevant External Links for ARHGEF3-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ARHGEF3-AS1 Gene

Disorders for ARHGEF3-AS1 Gene

Relevant External Links for ARHGEF3-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for ARHGEF3-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ARHGEF3-AS1 Gene

Publications for ARHGEF3-AS1 Gene

No publications were found for ARHGEF3-AS1 Gene.

Products for ARHGEF3-AS1 Gene

Sources for ARHGEF3-AS1 Gene

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