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Aliases for ARHGAP5 Gene

Aliases for ARHGAP5 Gene

  • Rho GTPase Activating Protein 5 2 3
  • RhoGAP5 3 4 6
  • Rho-Type GTPase-Activating Protein 5 3 4
  • Growth Factor Independent 2 2 3
  • P190-B 3 4
  • P100 RasGAP-Associated P105 Protein 3
  • Rho GTPase-Activating Protein 5 3
  • P105 RhoGAP 3
  • P190BRhoGAP 3
  • GFI2 3

External Ids for ARHGAP5 Gene

Previous HGNC Symbols for ARHGAP5 Gene

  • GFI2

Previous GeneCards Identifiers for ARHGAP5 Gene

  • GC14P030000
  • GC14P026333
  • GC14P030536
  • GC14P031615
  • GC14P032546
  • GC14P012663

Summaries for ARHGAP5 Gene

Entrez Gene Summary for ARHGAP5 Gene

  • Rho GTPase activating protein 5 negatively regulates RHO GTPases, a family which may mediate cytoskeleton changes by stimulating the hydrolysis of bound GTP. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]

GeneCards Summary for ARHGAP5 Gene

ARHGAP5 (Rho GTPase Activating Protein 5) is a Protein Coding gene. Among its related pathways are RhoGDI Pathway and Signaling by GPCR. GO annotations related to this gene include GTP binding and SH2 domain binding. An important paralog of this gene is SRGAP3.

UniProtKB/Swiss-Prot for ARHGAP5 Gene

  • GTPase-activating protein for Rho family members. May play a role in the reduction of the p21rasGTPase-activating potential of RASA1/p120GAP

Gene Wiki entry for ARHGAP5 Gene

No data available for Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ARHGAP5 Gene

Genomics for ARHGAP5 Gene

Regulatory Elements for ARHGAP5 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for ARHGAP5 Gene

Start:
32,076,114 bp from pter
End:
32,159,728 bp from pter
Size:
83,615 bases
Orientation:
Plus strand

Genomic View for ARHGAP5 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ARHGAP5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ARHGAP5 Gene

Proteins for ARHGAP5 Gene

  • Protein details for ARHGAP5 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q13017-RHG05_HUMAN
    Recommended name:
    Rho GTPase-activating protein 5
    Protein Accession:
    Q13017
    Secondary Accessions:
    • A1L375
    • A1L376
    • A8KAA1
    • D3DS89
    • D3DS90
    • Q05BE8
    • Q05BU8
    • Q59ER0
    • Q6DHZ3

    Protein attributes for ARHGAP5 Gene

    Size:
    1502 amino acids
    Molecular mass:
    172460 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAA95963.1; Type=Frameshift; Positions=Several; Evidence={ECO:0000305}; Sequence=AAH32723.1; Type=Miscellaneous discrepancy; Note=Contaminating sequence. Potential poly-A sequence.; Evidence={ECO:0000305};

    Three dimensional structures from OCA and Proteopedia for ARHGAP5 Gene

    Alternative splice isoforms for ARHGAP5 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ARHGAP5 Gene

Proteomics data for ARHGAP5 Gene at MOPED

Post-translational modifications for ARHGAP5 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Antibody Products

  • Cell Signaling Technology (CST) Antibodies for ARHGAP5 (ARHGAP5)

No data available for DME Specific Peptides for ARHGAP5 Gene

Domains for ARHGAP5 Gene

Gene Families for ARHGAP5 Gene

HGNC:
  • ARHGAP :Rho GTPase activating proteins

Protein Domains for ARHGAP5 Gene

Suggested Antigen Peptide Sequences for ARHGAP5 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q13017

UniProtKB/Swiss-Prot:

RHG05_HUMAN :
  • Q13017
Domain:
  • Contains 4 FF domains.
  • Contains 1 Rho-GAP domain.
genes like me logo Genes that share domains with ARHGAP5: view

Function for ARHGAP5 Gene

Molecular function for ARHGAP5 Gene

GENATLAS Biochemistry: Rho/GTPase activating protein 5,expressed in a variety of cells,located diffusely in the cytoplasm
UniProtKB/Swiss-Prot Function: GTPase-activating protein for Rho family members. May play a role in the reduction of the p21rasGTPase-activating potential of RASA1/p120GAP

Gene Ontology (GO) - Molecular Function for ARHGAP5 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003924 GTPase activity TAS 8537347
GO:0005096 GTPase activator activity IEA --
GO:0005515 protein binding IPI 23622247
GO:0005525 GTP binding IEA --
GO:0042169 SH2 domain binding IPI 1689011
genes like me logo Genes that share ontologies with ARHGAP5: view
genes like me logo Genes that share phenotypes with ARHGAP5: view

Animal Models for ARHGAP5 Gene

MGI Knock Outs for ARHGAP5:

Animal Model Products

miRNA for ARHGAP5 Gene

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ARHGAP5

In Situ Assay Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Transcription Factor Targeting and HOMER Transcription for ARHGAP5 Gene

Localization for ARHGAP5 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ARHGAP5 Gene

Cytoplasm. Membrane; Peripheral membrane protein. Note=Also membrane-associated when found in fibrillar patterns that colocalize with the alpha5-beta1 integrin receptor (ITGA5/ITGB1) for fibronectin.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ARHGAP5 Gene COMPARTMENTS Subcellular localization image for ARHGAP5 gene
Compartment Confidence
cytosol 4
nucleus 2
cytoskeleton 1
golgi apparatus 1
peroxisome 1

Gene Ontology (GO) - Cellular Components for ARHGAP5 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005622 intracellular --
GO:0005737 cytoplasm TAS 8537347
GO:0005829 cytosol TAS --
GO:0016020 membrane IEA --
genes like me logo Genes that share ontologies with ARHGAP5: view

Pathways for ARHGAP5 Gene

genes like me logo Genes that share pathways with ARHGAP5: view

Pathways by source for ARHGAP5 Gene

PCR Array Products

  • Pathway & Disease-focused RT² Profiler PCR Arrays

Gene Ontology (GO) - Biological Process for ARHGAP5 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0002053 positive regulation of mesenchymal cell proliferation IEA --
GO:0006184 obsolete GTP catabolic process --
GO:0007155 cell adhesion TAS 8537347
GO:0007165 signal transduction --
GO:0007264 small GTPase mediated signal transduction TAS --
genes like me logo Genes that share ontologies with ARHGAP5: view

Transcripts for ARHGAP5 Gene

Unigene Clusters for ARHGAP5 Gene

Rho GTPase activating protein 5:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ARHGAP5

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for ARHGAP5

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ARHGAP5 Gene

ExUns: 1 ^ 2 ^ 3 ^ 4a · 4b ^ 5a · 5b · 5c ^ 6a · 6b ^ 7 ^ 8 ^ 9 ^ 10a · 10b · 10c
SP1:
SP2: - -
SP3: - - - - - - - -
SP4:
SP5: - -
SP6:

Relevant External Links for ARHGAP5 Gene

GeneLoc Exon Structure for
ARHGAP5
ECgene alternative splicing isoforms for
ARHGAP5

Expression for ARHGAP5 Gene

mRNA expression in normal human tissues for ARHGAP5 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for ARHGAP5 Gene

SOURCE GeneReport for Unigene cluster for ARHGAP5 Gene Hs.592313

mRNA Expression by UniProt/SwissProt for ARHGAP5 Gene

Q13017-RHG05_HUMAN
Tissue specificity: Expressed in kidney, brain, liver and lung
genes like me logo Genes that share expressions with ARHGAP5: view

In Situ Assay Products

No data available for mRNA differential expression in normal tissues for ARHGAP5 Gene

Orthologs for ARHGAP5 Gene

This gene was present in the common ancestor of animals.

Orthologs for ARHGAP5 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ARHGAP5 35
  • 99.8 (n)
  • 100 (a)
ARHGAP5 36
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia ARHGAP5 35
  • 93.75 (n)
  • 97.22 (a)
ARHGAP5 36
  • 98 (a)
OneToOne
dog
(Canis familiaris)
Mammalia ARHGAP5 35
  • 95.25 (n)
  • 98.4 (a)
ARHGAP5 36
  • 98 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Arhgap5 35
  • 93.54 (n)
  • 97.4 (a)
Arhgap5 16
Arhgap5 36
  • 97 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia ARHGAP5 36
  • 95 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia ARHGAP5 36
  • 93 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Arhgap5 35
  • 93.21 (n)
  • 97.55 (a)
chicken
(Gallus gallus)
Aves ARHGAP5 35
  • 83.98 (n)
  • 91.41 (a)
ARHGAP5 36
  • 91 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia ARHGAP5 36
  • 91 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia arhgap5 35
  • 74.97 (n)
  • 78.97 (a)
Str.9761 35
zebrafish
(Danio rerio)
Actinopterygii arhgap5 35
  • 68.31 (n)
  • 74.08 (a)
arhgap5 36
  • 73 (a)
OneToOne
fruit fly
(Drosophila melanogaster)
Insecta RhoGAPp190 36
  • 28 (a)
OneToMany
RhoGAPp190 37
  • 33 (a)
worm
(Caenorhabditis elegans)
Secernentea rga-5 36
  • 25 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 53 (a)
ManyToMany
-- 36
  • 39 (a)
ManyToMany
Species with no ortholog for ARHGAP5:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for ARHGAP5 Gene

ENSEMBL:
Gene Tree for ARHGAP5 (if available)
TreeFam:
Gene Tree for ARHGAP5 (if available)

Paralogs for ARHGAP5 Gene

Pseudogenes.org Pseudogenes for ARHGAP5 Gene

genes like me logo Genes that share paralogs with ARHGAP5: view

Variants for ARHGAP5 Gene

Sequence variations from dbSNP and Humsavar for ARHGAP5 Gene

SNP ID Clin Chr 14 pos Sequence Context AA Info Type MAF
rs1065474 -- 32,101,545(+) CGTGC(C/T)TTTTG intron-variant
rs1952488 -- 32,136,013(-) TTGAT(G/T)AAGTA intron-variant
rs2149662 -- 32,097,244(-) TATTA(A/C)ATCCC intron-variant
rs2149664 -- 32,140,251(-) acaaa(C/T)aaaat intron-variant
rs2383282 -- 32,128,873(+) ACTGA(C/G)CTCAT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ARHGAP5 Gene

Variant ID Type Subtype PubMed ID
nsv832764 CNV Gain 17160897

Relevant External Links for ARHGAP5 Gene

HapMap Linkage Disequilibrium report
ARHGAP5
Human Gene Mutation Database (HGMD)
ARHGAP5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ARHGAP5 Gene

Disorders for ARHGAP5 Gene

Relevant External Links for ARHGAP5

Genetic Association Database (GAD)
ARHGAP5
genes like me logo Genes that share disorders with ARHGAP5: view

No data available for UniProtKB/Swiss-Prot for ARHGAP5 Gene

Publications for ARHGAP5 Gene

  1. p190-B, a new member of the Rho GAP family, and Rho are induced to cluster after integrin cross-linking. (PMID: 8537347) Burbelo P.D. … Yamada Y. (J. Biol. Chem. 1995) 2 3 4 23
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. P190-B, a Rho-GTPase-activating protein, is differentially expressed in terminal end buds and breast cancer. (PMID: 10939588) Chakravarty G. … Rosen J.M. (Cell Growth Differ. 2000) 3 23
  4. Nitroproteins from a human pituitary adenoma tissue discovered with a nitrotyrosine affinity column and tandem mass spectrometry. (PMID: 16777052) Zhan X. … Desiderio D.M. (Anal. Biochem. 2006) 3 4
  5. A novel amplification target, ARHGAP5, promotes cell spreading and migration by negatively regulating RhoA in Huh-7 hepatocellular carcinoma cells. (PMID: 18996642) Gen Y. … Yoshikawa T. (Cancer Lett. 2009) 3

Products for ARHGAP5 Gene

  • antibodies-online peptides for ARHGAP5
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  • antibodies-online kits for ARHGAP5

Sources for ARHGAP5 Gene

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