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Aliases for ARHGAP31-AS1 Gene

Subcategory (RNA class) for ARHGAP31-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ARHGAP31-AS1 Gene

  • ARHGAP31 Antisense RNA 1 2 3 5
  • ARHGAP31 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for ARHGAP31-AS1 Gene

Previous GeneCards Identifiers for ARHGAP31-AS1 Gene

  • GC00U933883
  • GC03M119034

Summaries for ARHGAP31-AS1 Gene

GeneCards Summary for ARHGAP31-AS1 Gene

ARHGAP31-AS1 (ARHGAP31 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for ARHGAP31-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ARHGAP31-AS1 Gene

Genomics for ARHGAP31-AS1 Gene

GeneHancer (GH) Regulatory Elements for ARHGAP31-AS1 Gene

Promoters and enhancers for ARHGAP31-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I119321 Promoter/Enhancer 2 FANTOM5 Ensembl ENCODE dbSUPER 550.8 -0.2 -218 2.7 HDGF ARID4B SIN3A ZNF2 IRF4 POLR2B ZNF207 ZNF143 FOS SP3 ARHGAP31-AS1 ARHGAP31 ADPRH B4GALT4 COX17 CD80 GC03M119342 RNU6-1127P
GH03I119320 Enhancer 1 FANTOM5 Ensembl dbSUPER 550.8 +1.8 1780 0.4 SP1 CC2D1A ZFHX2 ZNF766 CHAMP1 EGR2 ARHGAP31-AS1 ARHGAP31 ADPRH COX17 CD80 PIR60663
GH03I119292 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE dbSUPER 11.9 +27.5 27527 5.1 PKNOX1 SMAD1 SIN3A ZNF2 ZNF335 GLIS2 ZNF366 ATF7 RCOR1 ETV6 ARHGAP31 ARHGAP31-AS1 IGSF11 RPS26P21
GH03I119348 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 11.2 -28.8 -28767 6.1 ATF1 ZSCAN4 BATF RAD21 YY1 ETS1 ETV6 ATF7 BCLAF1 IKZF2 ARHGAP31 ADPRH ARHGAP31-AS1 CD80 B4GALT4 IGSF11 RPL10P7 COX17 GC03M119342 RNU6-1127P
GH03I119300 Enhancer 1.1 FANTOM5 Ensembl ENCODE dbSUPER 11.2 +21.4 21400 1.9 SRF ZFHX2 RCOR1 EGR2 PIR60663 ARHGAP31 ARHGAP31-AS1 ADPRH B4GALT4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ARHGAP31-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ARHGAP31-AS1 Gene

Genomic Locations for ARHGAP31-AS1 Gene
chr3:119,314,293-119,322,760
(GRCh38/hg38)
Size:
8,468 bases
Orientation:
Minus strand
chr3:119,033,140-119,041,607
(GRCh37/hg19)

Genomic View for ARHGAP31-AS1 Gene

Genes around ARHGAP31-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ARHGAP31-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ARHGAP31-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ARHGAP31-AS1 Gene

Proteins for ARHGAP31-AS1 Gene

Post-translational modifications for ARHGAP31-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ARHGAP31-AS1 Gene

Domains & Families for ARHGAP31-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ARHGAP31-AS1 Gene

Function for ARHGAP31-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ARHGAP31-AS1 Gene

Localization for ARHGAP31-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ARHGAP31-AS1 Gene

Pathways & Interactions for ARHGAP31-AS1 Gene

SuperPathways for ARHGAP31-AS1 Gene

No Data Available

Interacting Proteins for ARHGAP31-AS1 Gene

Gene Ontology (GO) - Biological Process for ARHGAP31-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ARHGAP31-AS1 Gene

Drugs & Compounds for ARHGAP31-AS1 Gene

No Compound Related Data Available

Transcripts for ARHGAP31-AS1 Gene

mRNA/cDNA for ARHGAP31-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ARHGAP31-AS1 Gene

No ASD Table

Relevant External Links for ARHGAP31-AS1 Gene

GeneLoc Exon Structure for
ARHGAP31-AS1
ECgene alternative splicing isoforms for
ARHGAP31-AS1

Expression for ARHGAP31-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ARHGAP31-AS1 Gene

genes like me logo Genes that share expression patterns with ARHGAP31-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ARHGAP31-AS1 Gene

Orthologs for ARHGAP31-AS1 Gene

Evolution for ARHGAP31-AS1 Gene

ENSEMBL:
Gene Tree for ARHGAP31-AS1 (if available)
TreeFam:
Gene Tree for ARHGAP31-AS1 (if available)

No data available for Orthologs for ARHGAP31-AS1 Gene

Paralogs for ARHGAP31-AS1 Gene

No data available for Paralogs for ARHGAP31-AS1 Gene

Variants for ARHGAP31-AS1 Gene

Sequence variations from dbSNP and Humsavar for ARHGAP31-AS1 Gene

SNP ID Clin Chr 03 pos Variation AA Info Type
rs1000122629 -- 119,316,555(-) C/T intron_variant
rs1000173705 -- 119,324,494(-) T/C upstream_transcript_variant
rs1000251060 -- 119,319,837(-) C/T intron_variant
rs1001074878 -- 119,318,537(-) C/T intron_variant
rs1001366038 -- 119,316,475(-) G/A intron_variant

Structural Variations from Database of Genomic Variants (DGV) for ARHGAP31-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv829694 CNV gain 17160897

Additional Variant Information for ARHGAP31-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ARHGAP31-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ARHGAP31-AS1 Gene

Disorders for ARHGAP31-AS1 Gene

Additional Disease Information for ARHGAP31-AS1

No disorders were found for ARHGAP31-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ARHGAP31-AS1 Gene

Publications for ARHGAP31-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58

Products for ARHGAP31-AS1 Gene

Sources for ARHGAP31-AS1 Gene

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