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Aliases for ARHGAP26-AS1 Gene

Subcategory (RNA class) for ARHGAP26-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ARHGAP26-AS1 Gene

  • ARHGAP26 Antisense RNA 1 2 3 5
  • ARHGAP26 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for ARHGAP26-AS1 Gene

Previous GeneCards Identifiers for ARHGAP26-AS1 Gene

  • GC00U933414
  • GC05M142240

Summaries for ARHGAP26-AS1 Gene

GeneCards Summary for ARHGAP26-AS1 Gene

ARHGAP26-AS1 (ARHGAP26 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ARHGAP26-AS1 Gene

Genomics for ARHGAP26-AS1 Gene

Regulatory Elements for ARHGAP26-AS1 Gene

Enhancers for ARHGAP26-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05F142843 0.8 Ensembl ENCODE 12.7 +22.0 21950 6.5 ATF1 ARNT FEZF1 ZNF2 ZNF121 GLIS2 KLF7 FOS KLF13 ZNF263 ARHGAP26-AS1 GC05P142852 GC05P142853 GC05P142826 GC05P142827
GH05F142719 0.9 Ensembl ENCODE 12.4 +148.2 148240 2.1 CTCF SOX13 PKNOX1 SIN3A RAD21 RARA GATA3 CTBP1 RCOR1 NR2F6 ARHGAP26-AS1 FGF1 ENSG00000261757 LINC01844
GH05F142717 1.1 Ensembl ENCODE 12.4 +151.4 151422 1.0 CTCF PKNOX1 TEAD4 ZBTB40 RAD21 ZNF155 TEAD3 ZNF121 RBAK ZNF169 MRPL11P2 ENSG00000251205 KIAA0141 ARHGAP26-AS1 LOC105378203 ENSG00000261757 LINC01844
GH05F142833 0.6 ENCODE 12.3 +34.6 34649 2.0 ELF3 TBP MLX ARID4B DMAP1 THRB RAD21 RARA CREM MIXL1 ARHGAP26-AS1 GC05P142826 GC05P142827 GC05P142852 GC05P142853
GH05F142815 0.9 Ensembl ENCODE 12.2 +44.6 44645 17.2 PKNOX1 MLX ZNF493 ZNF133 ARID4B FEZF1 GLI4 ZNF48 ZNF2 YY1 KIAA0141 LOC105378203 ARHGAP26-AS1 GC05P142826 GC05P142827 ARHGAP26
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around ARHGAP26-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for ARHGAP26-AS1 Gene

Chromosome:
5
Start:
142,859,604 bp from pter
End:
142,868,922 bp from pter
Size:
9,319 bases
Orientation:
Minus strand

Genomic View for ARHGAP26-AS1 Gene

Genes around ARHGAP26-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ARHGAP26-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ARHGAP26-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ARHGAP26-AS1 Gene

Proteins for ARHGAP26-AS1 Gene

Post-translational modifications for ARHGAP26-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ARHGAP26-AS1 Gene

Domains & Families for ARHGAP26-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ARHGAP26-AS1 Gene

Function for ARHGAP26-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ARHGAP26-AS1 Gene

Localization for ARHGAP26-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ARHGAP26-AS1 Gene

Pathways & Interactions for ARHGAP26-AS1 Gene

SuperPathways for ARHGAP26-AS1 Gene

No Data Available

Interacting Proteins for ARHGAP26-AS1 Gene

Gene Ontology (GO) - Biological Process for ARHGAP26-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ARHGAP26-AS1 Gene

Transcripts for ARHGAP26-AS1 Gene

mRNA/cDNA for ARHGAP26-AS1 Gene

(2) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ARHGAP26-AS1 Gene

ARHGAP26 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ARHGAP26-AS1 Gene

No ASD Table

Relevant External Links for ARHGAP26-AS1 Gene

GeneLoc Exon Structure for
ARHGAP26-AS1
ECgene alternative splicing isoforms for
ARHGAP26-AS1

Expression for ARHGAP26-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ARHGAP26-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for ARHGAP26-AS1 Gene

This gene is overexpressed in Testis (x47.0).

SOURCE GeneReport for Unigene cluster for ARHGAP26-AS1 Gene:

Hs.570896
genes like me logo Genes that share expression patterns with ARHGAP26-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for ARHGAP26-AS1 Gene

Orthologs for ARHGAP26-AS1 Gene

Evolution for ARHGAP26-AS1 Gene

ENSEMBL:
Gene Tree for ARHGAP26-AS1 (if available)
TreeFam:
Gene Tree for ARHGAP26-AS1 (if available)

No data available for Orthologs for ARHGAP26-AS1 Gene

Paralogs for ARHGAP26-AS1 Gene

No data available for Paralogs for ARHGAP26-AS1 Gene

Variants for ARHGAP26-AS1 Gene

Sequence variations from dbSNP and Humsavar for ARHGAP26-AS1 Gene

SNP ID Clin Chr 05 pos Sequence Context AA Info Type
rs10040804 -- 142,862,160(+) GACAG(C/G)CCTTG intron-variant
rs1054034 -- 142,860,089(-) cgggc(C/G)cactg intron-variant, nc-transcript-variant
rs111657247 -- 142,864,103(+) TCTCC(C/T)CTTAA intron-variant
rs112802614 -- 142,867,225(+) AAGAC(C/T)GTGTG intron-variant
rs113100143 -- 142,869,224(+) TTTTT(G/T)GAGAC intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for ARHGAP26-AS1 Gene

Variant ID Type Subtype PubMed ID
esv3606999 CNV gain 21293372
esv3607010 CNV loss 21293372
esv3607011 CNV gain 21293372
nsv1031126 CNV gain 25217958

Relevant External Links for ARHGAP26-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ARHGAP26-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ARHGAP26-AS1 Gene

Disorders for ARHGAP26-AS1 Gene

Relevant External Links for ARHGAP26-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ARHGAP26-AS1

No disorders were found for ARHGAP26-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ARHGAP26-AS1 Gene

Publications for ARHGAP26-AS1 Gene

No publications were found for ARHGAP26-AS1 Gene.

Products for ARHGAP26-AS1 Gene

Sources for ARHGAP26-AS1 Gene

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