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Aliases & Descriptions for RHOA
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| ARH12 2, 3 | | ARHA 2, 3 | | H12 3 | | RHO12 2, 3 | | RHOH12 1, 2 | | Rho12 1 | | RhoA 1 |
| | | Descriptions |
|---|
| Aplysia ras-related homolog 12 2 | | oncogene RHO H12 2 | | ras homolog gene family, member A 2 | | small GTP binding protein RhoA 2 |
|
| | Search outside databases for aliases for RHOA genePrevious GC identifer: GC03M049357 |
Summaries for RHOA(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| UniProtKB/Swiss-Prot: RHOA_HUMAN, P61586Function: Regulates a signal transduction pathway linking plasma membrane receptors to the assembly of focal adhesions and actin stress fibers. Serves as a target for the yopT cysteine peptidase from Yersinia pestis, vector of the plague, and Yersinia pseudotuberculosis, which causes gastrointestinal disorders. May be an activator of PLCE1. Activated by ARHGEF2, which promotes the exchange of GDP for GTPGene Wiki entry for RHOA |
Genomic Location for RHOA
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the RHOA gene 
Entrez Gene cytogenetic band: 3p21.3 Ensembl cytogenetic band: 3p21.31 HGNC cytogenetic band: 3p21.3RHOA Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 3 GeneLoc Exon Structure GeneLoc location for GC03M049371:
(about GC identifiers)
Start:
|
49,371,582 bp from pter |
End:
|
49,424,530 bp from pter |
Size:
|
52,949 bases |
Orientation:
|
minus strand |
RefSeq DNA sequence:- NC_000003.10 NT_022517.17
| Proteins for RHOA
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: RHOA_HUMAN, P61586 (See
protein sequence)Recommended Name: Transforming protein RhoA precursor Size: 193 amino acids; 21768 Da
Cofactor: Magnesium
Subunit: Interacts with RGNEF (By similarity). Binds PRKCL1, ROCK1 and ROCK2. Interacts with ARHGEF2, ARHGEF3, NET1 and RTKN. Interacts with PLCE1 and AKAP13. Interacts with human respiratory syncytial virus (HRSV) protein F; this interaction facilitates virus-induced syncytium formation
Subcellular location: Cell membrane; Lipid-anchor; Cytoplasmic side. Cytoplasm, cytoskeleton
PDB structures from and Proteopedia :1A2B (3D)
 1CC0 (3D)
 1CXZ (3D)
 1DPF (3D)
 1FTN (3D)
 1KMQ (3D)
 1LB1 (3D)
 1OW3 (3D)
 1S1C (3D)
 1TX4 (3D)
 1X86 (3D)
 1XCG (3D)
 2RGN (3D)
 
Secondary accessions: P06749 Q5U024 Q9UEJ4Post-translational modifications:
Substrate for botulinum ADP-ribosyltransferase1
Cleaved by yopT protease when the cell is infected by some Yersinia pathogens. This removes the lipid attachment, and leads to its displacement from plasma membrane and to subsequent cytoskeleton cleavage1
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_001655.1
ENSEMBL proteins: ENSP00000265538
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
5 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for RHOA: Assays for RHOA: | Protein
Domains/ Families for RHOA(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry P61586
ProtoNet protein and cluster: P61586 1 Blocks protein family: IPB003577 Ras small GTPase
UniProtKB/Swiss-Prot: RHOA_HUMAN, P61586Domain: The basic-rich region is essential for yopT recognition and cleavageSimilarity: Belongs to the small GTPase superfamily. Rho family | Gene Function for RHOA
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_001664
Applied Biosystems Silencer® siRNAs for RHOA
Sigma-Aldrich siRNA and siRNA Panels for RHOA  Sigma-Aldrich shRNA Panels and shRNA for RHOA  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_001664                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_001664                                  untagged cDNA clone in CMV expression vector: NM_001664 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_001664
UniProtKB/Swiss-Prot: RHOA_HUMAN, P61586Function: Regulates a signal transduction pathway linking plasma membrane receptors to the assembly of focal adhesions and actin stress fibers. Serves as a target for the yopT cysteine peptidase from Yersinia pestis, vector of the plague, and Yersinia pseudotuberculosis, which causes gastrointestinal disorders. May be an activator of PLCE1. Activated by ARHGEF2, which promotes the exchange of GDP for GTP5 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for RHOA
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
5/19 Sigma-Aldrich "Your Favorite Gene" Pathways for RHOA (Your Favorite Gene powered by Ingenuity) (see all 19
) 
Gene Network CentralTM Interacting Genes and Proteins Network for RHOA 
5/23 Interacting proteins for RHOA (P615861, 2) via UniProtKB, MINT, and/or STRING (see all 23
)About this table
5/12 Gene Ontology (GO) biological process terms (links to tree view) (see all 12
): About this table
|
Drugs & Compounds for RHOA(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for RHOA 10/47 Novoseek chemical compound relationships for RHOA gene (see all 47
)
| Compound |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| mdi-a |
84.76 |
21 |
12847276 (4), 12445462 (2), 17307336 (2), 18829452 (1) (see all 11) |
| geranylgeranyl pyrophosphate |
84.69 |
23 |
11864926 (2), 16873994 (2), 17947676 (2), 11334884 (1) (see all 14) |
| gdp |
71.79 |
36 |
11342655 (3), 11864926 (2), 9548756 (2), 9199174 (2) (see all 23) |
| geranylgeraniol |
71.62 |
6 |
15951198 (2), 16740276 (1), 10559211 (1), 12771933 (1) (see all 5) |
| mevalonate |
70.30 |
10 |
11788600 (2), 12427032 (2), 11286990 (1), 17075836 (1) (see all 7) |
| gtp |
69.67 |
89 |
10716190 (4), 18377644 (3), 12620811 (3), 16914531 (3) (see all 44) |
| actomyosin |
67.32 |
16 |
17646397 (2), 18086913 (2), 17446864 (1), 16721066 (1) (see all 12) |
| farnesyl diphosphate |
65.36 |
8 |
11334884 (1), 11470741 (1), 16858009 (1), 17237547 (1) (see all 5) |
| 1-oleoyl-lyso-phosphatidic acid |
58.38 |
4 |
9478968 (1), 10213513 (1) |
| phosphatidylinositol |
55.99 |
25 |
10843867 (3), 15339992 (3), 12860457 (1), 15169791 (1) (see all 17) |
About this table
|
Transcripts for RHOA(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_001664
Sigma-Aldrich siRNA and siRNA Panels for RHOA  Sigma-Aldrich shRNA Panels and shRNA for RHOA  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_001664 REFSEQ mRNAs for RHOA gene: NM_001664.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001664               OriGene GFP tagged cDNA clone in CMV expression vector: NM_001664                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_001664                                  untagged cDNA clone in CMV expression vector: NM_001664  Additional cDNA sequence: AF498970.1 AK130066.1 AK130808.1 AK222556.1 AK296654.1 AK307220.1 BC000946.3 BC001360.2 BC005976.1 BT019870.1 BX647063.1 CR590795.1 CR591837.1 CR592238.1 CR594903.1 CR595507.1 CR595947.1 CR596439.1 CR596598.1 CR596885.1 CR598647.1 CR600849.1 CR601531.1 CR602199.1 CR602563.1 CR602766.1 CR602977.1 CR605973.1 CR607421.1 CR607713.1 CR608339.1 CR608641.1 CR610129.1 CR610290.1 CR613062.1 CR617634.1 CR620398.1 CR621617.1 CR623439.1 CR624260.1 CR624876.1 L09159.1 L25080.1 X05026.1 24/66 DOTS entries (see all 66
): DT.91860959 DT.100695868 DT.100695864 DT.100695869 DT.120904554 DT.97868367 DT.100695874 DT.453628 DT.91777469 DT.100695847 DT.100059757 DT.91777425 DT.91777473 DT.100695880 DT.100695892 DT.100695881 DT.91777456 DT.100849651 DT.120904717 DT.120904642 DT.100695902 DT.100853328 DT.100853666 DT.100695876 24/2393 AceView cDNA sequences (see all 2393
):BM787053 F09126 CB143490 AL517655 BG391392 AU157538 BP367807 N33344 BM799554 CR600849 AU132231 AW328532 CD722386 CF128377 AW575016 CK430592 BG777693 BQ897808 AW675705 BI871326 AA343555 BQ027088 BE646213 BU156652
highest scoring ESTs for RHOA:L25080 AA182690 AA247174 AA295595 AA307327 AA314467 AA315468 AA315470 AA353360 AA353622 Unigene Cluster for RHOA: Ras homolog gene family, member A Hs.247077 [show with all ESTs]Unigene Representative Sequence: NM_001664
GeneLoc Exon Structure
4 Alternative Splicing Database (ASD) splice patterns (SP) for RHOA
| ExUns: | 1 | ^ | 2a | · | 2b | ^ | 3 | ^ | 4a | · | 4b | ^ | 5a | · | 5b | · | 5c | |
| SP1: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP2: | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |
| SP3: | |   | |   | - |   | - |   | - |   | |   | |   | |   | |   | |
| SP4: | |   | |   | |   | - |   | - |   | - |   | |   | |   | |   |
About this scheme
ECgene alternative splicing isoforms for RHOA
1 Ensembl transcript including schematic representation: ENST00000265538
|
Expression for RHOA
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| RHOA expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for RHOA
1 / 2 / 3 5 probe-sets matching RHOA gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: AACTTGGGCT
SOURCE GeneReport for Unigene cluster: Hs.247077
Expression variation in blood from EXPOLDB for RHOA |
Orthologs for RHOA
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for RHOA gene from 5/11 species (see all 11
)
About this table Species with no ortholog for RHOA
ENSEMBL Gene Tree for RHOA | Paralogs for RHOA(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for RHOA gene
- RHOB2 RHOC2
|
SNPs/Variants for RHOA(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for RHOA (up to first 250kb)
|
Disorders & Mutations for RHOA
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 165390
10/62 Novoseek disease relationships for RHOA gene (see all 62
)
| Disease |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| metastasis |
35.09 |
29 |
17597401 (2), 12581011 (2), 12939257 (1), 19264906 (1) (see all 17) |
| cancer |
30.64 |
36 |
14598891 (3), 15059348 (2), 17273773 (2), 15604264 (1) (see all 26) |
| tumors |
30.30 |
123 |
8302578 (6), 12855641 (5), 10328216 (4), 17881360 (3) (see all 50) |
| cardiac hypertrophy |
22.35 |
2 |
15715922 (1), 17468766 (1) |
| atherosclerosis |
19.33 |
1 |
12860900 (1) |
| carcinoma non-small cell lung |
18.95 |
1 |
17684444 (1) |
| megakaryoblastic leukemia acute |
16.28 |
2 |
8608802 (1), 15953360 (1) |
| prostate cancer |
16.19 |
10 |
16402387 (3), 16231705 (2), 12649199 (1), 16316623 (1) (see all 7) |
| glioblastoma |
15.62 |
2 |
17951409 (1), 16412397 (1) |
| colon carcinoma |
14.08 |
2 |
16715134 (1), 17178865 (1) |
About this table
|
Medical News for RHOA(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for RHOA (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/914 PubMed articles for RHOA gene (see all 914
):- XPLN, a guanine nucleotide exchange factor for RhoA and RhoB, but not RhoC. (PubMed id 12221096)1, 3, 4 Arthur W.T.... Wennerberg K. (2002)
- Ht31: the first protein kinase A anchoring protein to integrate protein kinase A and Rho signaling. (PubMed id 11696353)1, 3, 4 Klussmann E.... Rosenthal W. (2001)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)3, 4 Gerhard D.S....Malek J. (2004)
- Biochemical characterization of the Yersinia YopT protease: cleavage site and recognition elements in Rho GTPases. (PubMed id 12538863)3, 4 Shao F.... Dixon J.E. (2003)
- Structure of a constitutively activated RhoA mutant (Q63L) at 1.55 A resolution. (PubMed id 12777804)3, 4 Longenecker K....Derewenda Z.S. (2003)
- Direct activation of phospholipase C-epsilon by Rho. (PubMed id 12900402)3, 4 Wing M.R.... Harden T.K. (2003)
- Structural basis for the selective activation of Rho GTPases by Dbl exchange factors. (PubMed id 12006984)3, 4 Snyder J.T.... Sondek J. (2002)
- MgF(3)(-) as a transition state analog of phosphoryl transfer. (PubMed id 11927263)3, 4 Graham D.L.... Eccleston J.F. (2002)
- A Yersinia effector and a Pseudomonas avirulence protein define a family of cysteine proteases functioning in bacterial pathogenesis. (PubMed id 12062101)3, 4 Shao F.... Dixon J.E. (2002)
- The PDZ protein TIP-1 interacts with the Rho effector rhotekin and is involved in Rho signaling to the serum response element. (PubMed id 10940294)3, 4 Reynaud C....Jalinot P. (2000)
|
Search for RHOA
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing RHOA
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing RHOA
(According to HUGE)
About This Section
| -- |
Specialized Databases showing RHOA(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for RHOA(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for RHOA:

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| Antibodies & Assays for RHOA  |
| | Recombinant Proteins (Rho, RhoA, Rho A + B + C, Pan Rho + RAC (1,2,3) + CDC42) | | Antibodies (Rho, RhoA, Rho A + B + C, Pan Rho + RAC (1,2,3) + CDC42) |
| | | Search Tocris compounds for RHOA |
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Incremental update: 13 Oct 2009
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