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Aliases for ARAP1-AS2 Gene

Subcategory (RNA class) for ARAP1-AS2 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ARAP1-AS2 Gene

  • ARAP1 Antisense RNA 2 2 3 5
  • ARAP1 Antisense RNA 2 (Non-Protein Coding) 2

External Ids for ARAP1-AS2 Gene

Previous GeneCards Identifiers for ARAP1-AS2 Gene

  • GC11P072413

Summaries for ARAP1-AS2 Gene

GeneCards Summary for ARAP1-AS2 Gene

ARAP1-AS2 (ARAP1 Antisense RNA 2) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for ARAP1-AS2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ARAP1-AS2 Gene

Genomics for ARAP1-AS2 Gene

GeneHancer (GH) Regulatory Elements for ARAP1-AS2 Gene

Promoters and enhancers for ARAP1-AS2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11I072698 Enhancer 0.5 dbSUPER 550.8 -0.7 -714 2.2 GLIS1 HLF FOS ZIC2 ARAP1-AS2 STARD10 PDE2A ARAP1-AS1 ARAP1
GH11I072750 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 12.1 +52.0 51985 4 HDGF PKNOX1 MLX ARID4B SIN3A DMAP1 ZNF48 ZNF121 GLIS2 ELK1 ARAP1 RPS12P20 ARAP1-AS2 STARD10 PIR40050
GH11I072821 Promoter/Enhancer 1.6 Ensembl ENCODE dbSUPER 12.2 +121.9 121923 1.6 SIN3A ZNF2 GLIS2 ELK1 ATF7 RUNX3 SP3 GTF2B REST ZNF592 NUMA1 IL18BP LOC100128494 ARAP1 RPS12P20 ARAP1-AS2 RNU6-672P ARAP1-AS1 OR7E128P ATG16L2
GH11I072762 Enhancer 1.4 FANTOM5 ENCODE dbSUPER 11.4 +64.8 64838 5.6 PKNOX1 FOXA2 MLX ARID4B DMAP1 ZNF48 RUNX3 RXRA SP5 MXD4 ENSG00000202522 GC11P072768 ARAP1 STARD10 ATG16L2 RPS12P20 ARAP1-AS2 PDE2A ARAP1-AS1 RNU6-672P
GH11I072757 Enhancer 1.3 Ensembl ENCODE dbSUPER 11.4 +58.4 58398 1.9 HDGF PKNOX1 ATF1 ARNT GLI4 GLIS2 FOS ATF7 NCOA1 REST ARAP1 STARD10 RPS12P20 ARAP1-AS2 ATG16L2 ARAP1-AS1 PDE2A RNU6-672P PIR40050 GC11P072768
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ARAP1-AS2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ARAP1-AS2 Gene

Genomic Locations for ARAP1-AS2 Gene
chr11:72,700,474-72,705,607
(GRCh38/hg38)
Size:
5,134 bases
Orientation:
Plus strand
chr11:72,411,519-72,416,889
(GRCh37/hg19)

Genomic View for ARAP1-AS2 Gene

Genes around ARAP1-AS2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ARAP1-AS2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ARAP1-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ARAP1-AS2 Gene

Proteins for ARAP1-AS2 Gene

Post-translational modifications for ARAP1-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ARAP1-AS2 Gene

Domains & Families for ARAP1-AS2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ARAP1-AS2 Gene

Function for ARAP1-AS2 Gene

Phenotypes From GWAS Catalog for ARAP1-AS2 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ARAP1-AS2 Gene

Localization for ARAP1-AS2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ARAP1-AS2 Gene

Pathways & Interactions for ARAP1-AS2 Gene

SuperPathways for ARAP1-AS2 Gene

No Data Available

Interacting Proteins for ARAP1-AS2 Gene

Gene Ontology (GO) - Biological Process for ARAP1-AS2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ARAP1-AS2 Gene

Drugs & Compounds for ARAP1-AS2 Gene

No Compound Related Data Available

Transcripts for ARAP1-AS2 Gene

mRNA/cDNA for ARAP1-AS2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ARAP1-AS2 Gene

No ASD Table

Relevant External Links for ARAP1-AS2 Gene

GeneLoc Exon Structure for
ARAP1-AS2
ECgene alternative splicing isoforms for
ARAP1-AS2

Expression for ARAP1-AS2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ARAP1-AS2 Gene

mRNA differential expression in normal tissues according to GTEx for ARAP1-AS2 Gene

This gene is overexpressed in Whole Blood (x9.1).
genes like me logo Genes that share expression patterns with ARAP1-AS2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ARAP1-AS2 Gene

Orthologs for ARAP1-AS2 Gene

Evolution for ARAP1-AS2 Gene

ENSEMBL:
Gene Tree for ARAP1-AS2 (if available)
TreeFam:
Gene Tree for ARAP1-AS2 (if available)

No data available for Orthologs for ARAP1-AS2 Gene

Paralogs for ARAP1-AS2 Gene

No data available for Paralogs for ARAP1-AS2 Gene

Variants for ARAP1-AS2 Gene

Additional Variant Information for ARAP1-AS2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ARAP1-AS2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ARAP1-AS2 Gene

Disorders for ARAP1-AS2 Gene

Additional Disease Information for ARAP1-AS2

No disorders were found for ARAP1-AS2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ARAP1-AS2 Gene

Publications for ARAP1-AS2 Gene

  1. RNA-binding activity of TRIM25 is mediated by its PRY/SPRY domain and is required for ubiquitination. (PMID: 29117863) Choudhury NR … Michlewski G (BMC biology 2017) 3

Products for ARAP1-AS2 Gene

Sources for ARAP1-AS2 Gene

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