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AQP7P1 Gene(Pseudogene)

Aquaporin 7 Pseudogene 1

GCID:
GC09M063315
GIFtS:
21
Genes Participants
UDN Logo

Aliases for AQP7P1 Gene

Aliases for AQP7P1 Gene

  • Aquaporin 7 Pseudogene 1 2 3 5
  • BA251O17.3 3

External Ids for AQP7P1 Gene

Previous GeneCards Identifiers for AQP7P1 Gene

  • GC09M065792
  • GC09M066960
  • GC09M067270

Summaries for AQP7P1 Gene

GeneCards Summary for AQP7P1 Gene

AQP7P1 (Aquaporin 7 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for AQP7P1 Gene

Genomics for AQP7P1 Gene

Products:

  1. Regulatory Element

Regulatory Elements for AQP7P1 Gene

Enhancers for AQP7P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09G063336 1 Ensembl ENCODE 0.7 -3.6 -3557 2.9 ELF3 SOX13 FOXA2 ATF1 JUN RARA NR2F6 FOS TCF7L2 SOX5 AQP7P1 GC09P063343
GH09G063342 1 Ensembl ENCODE 0.4 -8.3 -8281 1.6 HDAC1 ELF3 SOX13 FOXA2 TAL1 RARA TCF12 GATA2 NCOR1 SOX5 GC09P063343 AQP7P1
GH09G063335 0.2 Ensembl 0.7 -0.9 -881 0.4 AQP7P1 GC09P063343
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around AQP7P1 on UCSC Golden Path with GeneCards custom track

Transcription factor binding sites by QIAGEN in the AQP7P1 gene promoter:

Genomic Location for AQP7P1 Gene

Chromosome:
9
Start:
63,315,243 bp from pter
End:
63,334,520 bp from pter
Size:
19,278 bases
Orientation:
Minus strand

Genomic View for AQP7P1 Gene

Genes around AQP7P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
AQP7P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for AQP7P1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for AQP7P1 Gene

Proteins for AQP7P1 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for AQP7P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for AQP7P1 Gene

Domains & Families for AQP7P1 Gene

Suggested Antigen Peptide Sequences for AQP7P1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for AQP7P1 Gene

Function for AQP7P1 Gene

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  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
  7. Flow Cytometry

Phenotypes for AQP7P1 Gene

GenomeRNAi human phenotypes for AQP7P1:
genes like me logo Genes that share phenotypes with AQP7P1: view

Animal Model Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for AQP7P1 Gene

Localization for AQP7P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for AQP7P1 Gene

Pathways & Interactions for AQP7P1 Gene

SuperPathways for AQP7P1 Gene

PathCards logo More details on SuperPathways for AQP7P1
No Data Available

Interacting Proteins for AQP7P1 Gene

Gene Ontology (GO) - Biological Process for AQP7P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for AQP7P1 Gene

Drugs & Compounds for AQP7P1 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for AQP7P1 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
  5. Flow Cytometry

mRNA/cDNA for AQP7P1 Gene

(5) Additional mRNA sequences :
(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for AQP7P1 Gene

Aquaporin 7 pseudogene 1:
Representative Sequences:

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for AQP7P1 Gene

No ASD Table

Relevant External Links for AQP7P1 Gene

GeneLoc Exon Structure for
AQP7P1
ECgene alternative splicing isoforms for
AQP7P1

Expression for AQP7P1 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for AQP7P1 Gene

mRNA expression in normal human tissues for AQP7P1 Gene
mRNA expression by GTEx for AQP7P1 Gene

mRNA differential expression in normal tissues according to GTEx for AQP7P1 Gene

This gene is overexpressed in Adipose - Visceral (Omentum) (x14.2), Adipose - Subcutaneous (x7.5), Heart - Left Ventricle (x6.3), and Breast - Mammary Tissue (x5.7).

NURSA nuclear receptor signaling pathways regulating expression of AQP7P1 Gene:

AQP7P1

SOURCE GeneReport for Unigene cluster for AQP7P1 Gene:

Hs.658215
genes like me logo Genes that share expression patterns with AQP7P1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for AQP7P1 Gene

Orthologs for AQP7P1 Gene

Evolution for AQP7P1 Gene

ENSEMBL:
Gene Tree for AQP7P1 (if available)
TreeFam:
Gene Tree for AQP7P1 (if available)

No data available for Orthologs for AQP7P1 Gene

Paralogs for AQP7P1 Gene

No data available for Paralogs for AQP7P1 Gene

Variants for AQP7P1 Gene

Sequence variations from dbSNP and Humsavar for AQP7P1 Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type
rs1000120269 -- 63,321,631(+) AGGAG(A/G)CTGAG intron-variant
rs1000240091 -- 63,318,830(+) CCCAG(C/G)CAGTG intron-variant
rs1000842398 -- 63,329,971(+) TGGCA(A/G)AAGGC intron-variant
rs1001227418 -- 63,327,330(+) CATGA(A/G)GTGTG intron-variant
rs1001281521 -- 63,324,952(+) GTCGC(A/C)CAGCT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for AQP7P1 Gene

Variant ID Type Subtype PubMed ID
dgv4399e59 CNV duplication 20981092
dgv93n68 CNV loss 17160897
dgv94n68 CNV loss 17160897
esv3328216 CNV duplication 20981092
esv3350808 CNV duplication 20981092
esv3391973 CNV duplication 20981092
esv3392083 CNV duplication 20981092
esv3432950 CNV duplication 20981092
esv3450991 CNV duplication 20981092
nsv1077545 CNV duplication 25765185
nsv1115822 CNV duplication 24896259
nsv1119298 CNV duplication 24896259
nsv1139979 CNV duplication 24896259
nsv1153561 CNV duplication 26484159
nsv8497 CNV gain+loss 18304495
nsv951196 CNV duplication 24416366
nsv968682 CNV duplication 23825009
nsv972381 CNV duplication 23825009
nsv982283 CNV duplication 23825009

Relevant External Links for AQP7P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
AQP7P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for AQP7P1 Gene

Disorders for AQP7P1 Gene

Relevant External Links for AQP7P1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
AQP7P1

No disorders were found for AQP7P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for AQP7P1 Gene

Publications for AQP7P1 Gene

  1. Human aquaporin adipose (AQPap) gene. Genomic structure, promoter analysis and functional mutation. (PMID: 11952783) Kondo H. … Matsuzawa Y. (Eur. J. Biochem. 2002) 2 3 64
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for AQP7P1 Gene

Sources for AQP7P1 Gene

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