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AQP10 Gene

protein-coding GIFtS: 49

GC01P152560

aquaporin 10
Symbol approved by the HUGO Gene Nomenclature Committee (HGNC) database

(According to ¹HGNC, ²Entrez Gene,
³UniProtKB/Swiss-Prot, ⁴UniProtKB/TrEMBL, ⁵OMIM, ⁶GeneLoc , and/or ⁷Ensembl, ⁸miRBase)
About This Section

Aliases
AQP-10 ^³
AQPA_HUMAN ^²
OTTHUMP00000034196 ^²

Descriptions
Small intestine aquaporin ^², ³
aquaporin 10 ^²

External Ids
HGNC: 16029¹
Entrez Gene: 89872²
UniProtKB: Q96PS8³
Ensembl: ENSG00000143595⁷

Search outside databases for aliases for AQP10 gene

Previous GC identifers: GC01P152110 GC01P150024 GC01P151068 GC01P151510 GC01P151106

(According to Entrez Gene, Wikipedia's Gene Wiki,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

EntrezGene summary for AQP10:

This gene encodes a member of the aquaglyceroporin family of integral membrane proteins. Members of

this family function as water-permeable channels in the epithelia of organs that absorb and

excrete water. This protein was shown to function as a water-selective channel, and could also

permeate neutral solutes such as glycerol and urea. [provided by RefSeq]

UniProtKB/Swiss-Prot: AQP10_HUMAN, Q96PS8

Function: Forms a water channel. Not permeable to urea and glycerol. May contribute to water

transport in the upper portion of small intestine

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to UCSC and Ensembl, Transcription factor binding sites according to SABiosciences)
About This Section

Genomic View:

UCSC Golden Path with GeneCards custom track

Transcription factor binding sites upstream to the AQP10 gene

Entrez Gene cytogenetic band: 1q21.3 Ensembl cytogenetic band: 1q21.3 HGNC cytogenetic band: 1q21.3

AQP10 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)

GeneLoc gene densities for chromosome 1 GeneLoc Exon Structure

GeneLoc location for GC01P152560: (about GC identifiers)

Start:	152,560,216 bp from pter
End:	152,564,425 bp from pter
Size:	4,210 bases
Orientation:	plus strand

RefSeq DNA sequence:

NC_000001.9 NT_004487.18

(According to ¹UniProtKB, and/or Ensembl, Phosphorylation sites according to ²Phosphosite, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Enzo Life Sciences, Abnova, OriGene and/or, Abcam,
Biochemical Assays by Invitrogen, Millipore, R&D Systems, Cell Signaling Technology, and/or Enzo Life Sciences, Ontologies according to Gene Ontology Consortium 01 Apr 2009 and Entrez Gene, Antibodies by Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Cell Signaling Technology, Abcam, Abnova, and/or Novus Biologicals)
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UniProtKB/Swiss-Prot: AQP10_HUMAN, Q96PS8 (See protein sequence)

Recommended Name: Aquaporin-10

Size: 301 amino acids; 31763 Da

Subcellular location: Membrane; Multi-pass membrane protein

Secondary accessions: Q5VYD3 Q5VYD4 Q8NG70

Alternative splicing: 2 isoforms: Q96PS8-1 Q96PS8-2

REFSEQ proteins: NP_536354.2

ENSEMBL proteins:

ENSP00000318355 ENSP00000347330

Human Recombinant Proteins

	Browse Drug Discovery Central at Invitrogen for human recombinant proteins
	Browse Purified and Recombinant Proteins at Millipore
	Browse Human Recombinant Proteins at Sigma-Aldrich
	Browse R&D Systems for human recombinant proteins
	Browse recombinant and purified proteins available from Enzo Life Sciences
	Recombinant Proteins from Abcam (Aquaporin 10)
	Browse Abnova for Human Recombinant Proteins

Browse Origene for full length recombinant human proteins expressed in human HEK293 cells

2 Gene Ontology (GO) cellular component terms (links to tree view):

GO ID	Qualified GO term	Evidence	PubMed IDs
GO:0016020	membrane	IEA	--
GO:0016021	integral to membrane	IEA	--

About this table

Antibodies for AQP10:

	Browse Antibodies Central at Invitrogen
	Browse Millipore's Extensive Line of Mono- and Polyclonal Antibodies
	Sigma-Aldrich Antibodies for AQP10
	Browse R&D Systems for Antibodies
	Antibodies from Abcam (Aquaporin 10), each with their Abpromise^SM
	Browse Abnova for Monoclonal and Polyclonal Antibodies
	Search Novus for antibodies for AQP10

Assays for AQP10:

	Browse Invitrogen for biochemical assays
	Browse Kits and Assays available from Millipore
	Browse R&D Systems for biochemical assays
	Browse biochemical assays available from Enzo Life Sciences

(According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
About This Section

Graphical View of Domain Structure for InterPro Entry Q96PS8

ProtoNet protein and cluster: Q96PS8

1 Blocks protein family: IPB000425 MIP family

UniProtKB/Swiss-Prot: AQP10_HUMAN, Q96PS8

Domain: Aquaporins contain two tandem repeats each containing three membrane-spanning domains and a

pore-forming loop with the signature motif Asn-Pro-Ala (NPA)

Similarity: Belongs to the MIP/aquaporin (TC 1.A.8) family

(According to MGI Jun 06 2009, UniProtKB, IUBMB,and/or Genatlas,
shRNA from OriGene, Sigma-Aldrich, RNAi from Sigma-Aldrich,
RNAi Products, Clones, and Q-PCR Products from Invitrogen, Millipore, OriGene, and/or Abnova, siRNAs from Applied Biosystems, SYBR primers from OriGene, Cell-based Assays from Millipore, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
About This Section

Inhib. RNA:		Invitrogen RNAi Products for gene knock-down (AQP10)
		Browse for Gene Knock-down Tools from Millipore
		Abnova Chimera RNAi Products for Gene knock-down (AQP10)

OriGene 29mer shRNA kit in GFP-retroviral vector: NM_080429

Applied Biosystems Silencer® siRNAs for AQP10

Sigma-Aldrich siRNA and siRNA Panels for AQP10

Sigma-Aldrich shRNA for AQP10

Explore Sigma-Aldrich super-pooled esiRNAs

Clones:		Browse Clone Ranger at Invitrogen for clones
		Browse Clones for the Expression of Recombinant Proteins Available from Millipore

OriGene GFP tagged cDNA clone in CMV expression vector: NM_080429
Myc/DDK tagged cDNA clone in CMV expression vector: NM_080429
untagged cDNA clone in CMV expression vector: NM_080429

Primers:

Browse Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers

OriGene genome-wide validated SYBR primer pairs: NM_080429

UniProtKB/Swiss-Prot: AQP10_HUMAN, Q96PS8

Function: Forms a water channel. Not permeable to urea and glycerol. May contribute to water

transport in the upper portion of small intestine

1 Gene Ontology (GO) molecular function term (links to tree view):

GO ID	Qualified GO term	Evidence	PubMed IDs
GO:0005215	transporter activity	IEA	--

About this table

(Pathways according to Invitrogen (maps by GeneGo), Millipore, Cell Signaling Technology, Sigma-Aldrich, KEGG and/or UniProtKB,
Sets of similar genes according to GeneDecks, Proteins Network according to SABiosciences, Interactions according to ¹UniProtKB, ²MINT, and/or ³STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
About This Section

1 Interacting protein for AQP10 (ENSP00000318355³) via UniProtKB, MINT, and/or STRING

Interactant		Interaction Details
GeneCard	External ID(s)	Interaction Details
AQP12A	ENSP00000337144³	STRING (score=.758)

About this table

1 Gene Ontology (GO) biological process term (links to tree view):

GO ID	Qualified GO term	Evidence	PubMed IDs
GO:0006810	transport	IEA	--

About this table

(Chemical Compounds according to UniProtKB, Enzo Life Sciences, Sigma-Aldrich, Tocris Bioscience, and/or Novoseek and Drugs according to Enzo Life Sciences and/or PharmGKB)
About This Section

Browse drugs & compounds from Enzo Life Sciences

Browse Small Molecules at Sigma-Aldrich

Browse Tocris compounds for AQP10

(GenBank/EMBL/DDBJ Accessions according to
Unigene (Build 219 Homo sapiens; Jun 2 2009) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or AceView,
non coding RNAs according to RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
RNAi Products from Invitrogen, Millipore, and/or Abnova,
siRNAs from Applied Biosystems, Sigma-Aldrich,
shRNA from Sigma-Aldrich, OriGene,
Tagged/untagged cDNA clones from OriGene,
Expression Assays from Applied Biosystems)
About This Section

Inhib. RNA:		Invitrogen RNAi Products for gene knock-down (AQP10)
		Browse for Gene Knock-down Tools from Millipore
		Abnova Chimera RNAi Products for Gene knock-down (AQP10)

OriGene 29mer shRNA kit in GFP-retroviral vector: NM_080429

Sigma-Aldrich siRNA and siRNA Panels for AQP10

Sigma-Aldrich shRNA for AQP10

Explore Sigma-Aldrich super-pooled esiRNAs

Applied Biosystems Silencer® siRNAs:

NM_080429

REFSEQ mRNAs for AQP10 gene:

NM_080429.2

Applied Biosystems TaqMan ® Gene Expression Assays:

NM_080429

              OriGene GFP tagged cDNA clone in CMV expression vector: NM_080429
                                 Myc/DDK tagged cDNA clone in CMV expression vector: NM_080429
                                 untagged cDNA clone in CMV expression vector: NM_080429

Additional cDNA sequence:

AB066105.1 AK314993.1 BC069607.1 BC074896.2 BC074897.2 CR614330.1

2 DOTS entries:

DT.99997911 DT.40299052

17 AceView cDNA sequences:

BC074896 BC069607 AF159174 CR614330 BC074897 BX371346 BX483097 NM_080429

BX368990 AW592086 AB066105 AL521579 AW665999 AA693965 AL521580 BX345560

BX345561

highest scoring ESTs for AQP10:

AA693965 AB066105 AL521579 AW592086 AW665999 BC069607 BX368990 BX371346 AF159174 AL521580

Unigene Cluster for AQP10:

Aquaporin 10

Hs.259048 [show with all ESTs]

Unigene Representative Sequence: CR614330

GeneLoc Exon Structure

2 Alternative Splicing Database (ASD) splice patterns (SP) for AQP10

ExUns:	1	^	2	^	3	^	4	^	5	^	6a	·	6b
SP1:
SP2:

About this scheme

ECgene alternative splicing isoforms for AQP10

2 Ensembl transcripts including schematic representations:

ENST00000324978 ENST00000355197

(Experimental results according to ¹GeneNote and GNF BioGPS,
probe sets-to-genes annotations according to ²GeneAnnot , ³GeneTide , Sets of similar genes according to GeneDecks, Electronic Northern calculations according to data from UniGene (Build 219 Homo sapiens), SAGE tags according to CGAP, plus additional links to SOURCE, and/or GNF BioGPS, and/or EXPOLDB, and/or UniProtKB,
Expression Assays from Applied Biosystems )
About This Section

AQP10 expression in normal and diseased human tissues

Applied Biosystems TaqMan ® Gene Expression Assays for AQP10

¹ / ²

1 probe-set matching AQP10 gene

	Affymetrix probe-set	Array	# genes	Sensitivity	Specificity	Correlation	Length	Gb_Accession	Consensus	Uniqueness	Score	Rank
	Affymetrix probe-set	Array	GeneAnnot data			GeneNote data		GeneTide data
	1555338_s_at²	U133Plus2	1	1.00	1.00	--	--	--	--	--	--	--

About this table

Data from

(Publications) and GNF BioGPS
About these images
About these images

CGAP SAGE TAG: GACCCTGGAG

SOURCE GeneReport for Unigene cluster: Hs.259048
UniProtKB/Swiss-Prot: AQP10_HUMAN, Q96PS8
Tissue specificity: Expressed exclusively in duodenum and jejunum. Highest expression in absorptive
epithelial cells at the tips of villi in the jejunum

(Orthologs according to ^1,2HomoloGene (²older version, for species not in ¹newer version), ³euGenes, ⁴SGD and/or ⁵MGI Jun 06 2009, with possible further links to Flybase and/or WormBase, Gene Trees according to Ensembl)
About This Section

Orthologs for AQP10 gene from 4 species

Organism	Gene	Locus	Description	Human Similarity	NCBI accessions
dog (Canis familiaris)	AQP10¹	--	aquaporin 10	88.14(n) 86.58(a)	612280 XM_850021.1 XP_855114.1
chimpanzee (Pan troglodytes)	AQP10¹	--	aquaporin 10	99.78(n) 99.67(a)	739880 XM_001151333.1 XP_001151333.1
zebrafish (Danio rerio)	wufj98f09²	--	wufj98f09	69.95(n)	334529 BC056802.1
worm (Caenorhabditis elegans)	Y69E1A.7³	IV(10961471-10962477)	Major intrinsic protein	40(a) (best of 2)	--

About this table Species with no ortholog for AQP10

ENSEMBL Gene Tree for AQP10

(Paralogs according to ¹HomoloGene
and ²Ensembl, Pseudogenes according to ³Pseudogene.org)
About This Section

Paralogs for AQP10 gene

AQP7P3² AQP9² AQP7P1² AQP3² AQP7² AQP7P4²

(According to the ¹NCBI SNP Database, ²Ensembl, ³PupaSUITE, and UniProtKB, Linkage Disequilibrium by HapMap, Genotyping Reagents from Applied Biosystems)
About This Section

10/46 NCBI SNPs in AQP10 are shown (see all 46 )
(Click for Applied Biosystems TaqMan ® Genotyping Assay) (see all 23)

AB	SNP ID	Valid	Chr 1 pos	Sequence	Recs	AA Chg	Type	More	Recs	Allele freq	Pop	Total sample	More
AB	Genomic Data				Transcription Data				Allele Frequencies
				--	--	--		--	--				--
	rs6672010^1,2	A,C,F,H	152558785(+)	`ATTgtC/Ttgttt`	1	--	ng5¹		8		EU EA WA	834
--	rs6668968^1,2	A,C,F,H	152560299(+)	`CCTCCG/AGATAC`	1	Q/R	mis¹ ese³		9		EU EA WA NA	910
	rs6685323^1,2	A,C,F,H	152562216(+)	`TCTACC/TATGGT`	1	H/Y	mis¹		12		EU EA WA	1256
	rs1685633^1,2	C,F,H	152558342(+)	`CATGGA/GTGATA`	1	--	ng5¹		4		EU EA WA	402
--	rs1760798^1,2	A,C	152559123(-)	`TGGAAA/GGACTG`	1	--	ng5¹ tfbs³		0	--	--	--	--
--	rs1685635^1,2	A,C	152558944(+)	`AGAGTA/GGCATG`	1	--	ng5¹		0	--	--	--	--
--	rs1685606^1,2	A,C	152558972(+)	`GTGGAA/GCTCAG`	1	--	ng5¹		0	--	--	--	--
--	rs1685634^1,2	A,C	152558816(+)	`tctagA/Gagggc`	1	--	ng5¹		0	--	--	--	--
	rs35950207^1,2	F	152558582(+)	`TGTAGC/TGAATG`	1	--	ng5¹		2		NA	182
--	rs2633433^1,2	C	152559169(-)	`GCCTTA/TCCCCA`	1	--	ng5¹		0	--	--	--	--

About this table

HapMap Linkage Disequilibrium images for AQP10 (up to first 250kb)

(in which this Gene is Involved, According to OMIM, UniProtKB, PharmGKB, Genatlas, GeneTests, Blood group antigen gene mutations by BGMUT, HGMD, GAD, HuGE Navigator, BCGD, and/or TGDB.)
About This Section

OMIM: 606578

Human Genome Epidemiology Navigator: AQP10 (3 documents)

(Possibly Related Articles in Doctor's Guide)
About This Section

(in PubMed. Associations of this gene to articles via ¹Novoseek, ²HGNC, ³Entrez Gene, ⁴UniProtKB/Swiss-Prot, ⁵UniProtKB/TrEMBL, ⁶GAD, and/or ⁷PharmGKB)
About This Section

10/13 PubMed articles for AQP10 gene (see all 13 ):

Cloning of a new aquaporin (AQP10) abundantly expressed in duodenum and jejunum. (PubMed id 11573934)^{1, 2, 3, 4} Hatakeyama S.... Yamamoto T. (2001)
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)^{3, 4} Gerhard D.S....Malek J. (2004)
Cloning and identification of a new member of water channel (AQP10) as an aquaglyceroporin. (PubMed id 12084581)^{3, 4} Ishibashi K.... Imai M. (2002)
Expression and localization of two isoforms of AQP10 in human small intestine. (PubMed id 15898950)^{1, 3} Li H....Yamamoto T. (2005)
Compartmentalization of aquaporins in the human intestine. (PubMed id 18678926)^{1, 3} Cohly H.H....Rajnarayanan R.V. (2008)
Gene variants associated with ischemic stroke: the cardiovascular health study. (PubMed id 19023099)³ Luke M.M....Psaty B.M. (2009)
Transcriptomic and genetic studies identify IL-33 as a candidate gene for Alzheimer's disease. (PubMed id 19204726)³ Chapuis J....Lambert J.C. (2009)
Association of gene variants with incident myocardial infarction in the Cardiovascular Health Study. (PubMed id 17975119)³ Shiffman D....Psaty B.M. (2008)
The DNA sequence and biological annotation of human chromosome 1. (PubMed id 16710414)⁴ Gregory S.G.... Bentley D.R. (2006)
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932)³ Strausberg R.L....Marra M.A. (2002)

(in PubMed, OMIM, and NCBI Bookshelf)
About This Section

		AND	OR
Aliases
Free Text

Query String		PubMed OMIM NCBI Bookshelf
	(Note: In FireFox, select the above section and copy using Ctrl-C)

(According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, and/or H-InvDB)
About This Section

Entrez Gene: 89872	HGNC: 16029	AceView: AQP10	Ensembl:ENSG00000143595	euGenes: HUgn89872
ECgene: AQP10	H-InvDB: AQP10

(According to HUGE)
About This Section

(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section

Licensable Technologies for AQP10
(Available from WIS Yeda, Salk, Tufts)

About This Section

(Reagents available from Applied Biosystems, Antibodies and assays by Cell Signaling Technology, Abcam, Novus Biologicals,
Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich,
Enzo Life Sciences, and/or Tocris Bioscience)
About This Section

Products for AQP10:

TaqMan ® Gene Expression Assays

TaqMan ® Genotyping Assays

Free SNP selection tool

Invitrogen iPath Pathways	Invitrogen BLOCK-iT™ RNAi
Invitrogen Antibodies	Invitrogen Assays
Invitrogen Clones	Invitrogen Q-PCR Products
Invitrogen Human Recombinant Kinases	Invitrogen Custom Antibody and Peptide Service
Invitrogen Proteins / Assays / Screening Services	Search Invitrogen catalog for AQP10-related products

	Millipore Custom Antibody & Bulk Services
	Millipore Preclinical / Clinical Development Services
	Millipore Immunoassay Services
	Millipore Target Screening & Profiling Services

	Predesigned and custom siRNAs for AQP10		Antibodies for AQP10
	Explore super-pooled esiRNAs		Browse proteins at Sigma-Aldrich
	Lentivirus-delivered shRNAs for AQP10		Browse small molecules at Sigma-Aldrich
	"Your Favorite Gene" Pathways		feedback

	Antibodies		Primer Pairs
	Cell Culture Products		ELISAs
	Flow Cytometry Kits		Protease Activity Assays & Reagents
	Cell Selection/Detection Kits & Reagents		ELISA/Assay Development Kits & Reagents
	Multiplex/Array Assay Kits & Reagents		ELISpot Kits & Development Modules
	Recombinant & Natural Proteins

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Search www.enzolifesicences.com for proteins, assays, substrates, inhibitors & antibodies

Search Novus for antibodies for AQP10

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AQP10 Gene

protein-coding GIFtS: 49

Aliases &
Descriptions
for AQP10

Summaries
for AQP10

Genomic Location
for AQP10

Proteins
for AQP10

Protein Domains/
Families
for AQP10

Gene Function
for AQP10

Pathways & Interactions
for AQP10

Drugs & Compounds
for AQP10

Transcripts
for AQP10

Expression
for AQP10

Orthologs
for AQP10

Paralogs
for AQP10

SNPs/Variants
for AQP10

Disorders & Mutations
for AQP10

Medical News
for AQP10

Publications
for AQP10

Search for AQP10

Genome Databases showing AQP10

Other Databases showing AQP10

Specialized Databases showing AQP10

Licensable Technologies
for AQP10

Services
for AQP10

Gene Index: 3 5 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

AQP10 Gene

protein-coding GIFtS: 49

Aliases & Descriptionsfor AQP10

Summariesfor AQP10

Genomic Locationfor AQP10

Proteinsfor AQP10

Protein Domains/Familiesfor AQP10

Gene Functionfor AQP10

Pathways & Interactionsfor AQP10

Drugs & Compoundsfor AQP10

Transcriptsfor AQP10

Expression for AQP10

Orthologsfor AQP10

Paralogsfor AQP10

SNPs/Variantsfor AQP10

Disorders & Mutationsfor AQP10

Medical Newsfor AQP10

Publicationsfor AQP10

Search for AQP10

Genome Databases showing AQP10

Other Databases showing AQP10

Specialized Databases showing AQP10

Licensable Technologiesfor AQP10

Servicesfor AQP10

Gene Index: 3 5 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

Aliases &
Descriptions
for AQP10

Summaries
for AQP10

Genomic Location
for AQP10

Proteins
for AQP10

Protein Domains/
Families
for AQP10

Gene Function
for AQP10

Pathways & Interactions
for AQP10

Drugs & Compounds
for AQP10

Transcripts
for AQP10

Expression
for AQP10

Orthologs
for AQP10

Paralogs
for AQP10

SNPs/Variants
for AQP10

Disorders & Mutations
for AQP10

Medical News
for AQP10

Publications
for AQP10

Licensable Technologies
for AQP10

Services
for AQP10