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Aliases for APOOP4 Gene

Aliases for APOOP4 Gene

  • Apolipoprotein O Pseudogene 4 2 3 5

External Ids for APOOP4 Gene

Previous GeneCards Identifiers for APOOP4 Gene

  • GC04M069169

Summaries for APOOP4 Gene

GeneCards Summary for APOOP4 Gene

APOOP4 (Apolipoprotein O Pseudogene 4) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for APOOP4 Gene

Genomics for APOOP4 Gene

Regulatory Elements for APOOP4 Gene

Enhancers for APOOP4 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04G068344 0.8 Ensembl dbSUPER 4.9 -40.0 -40035 1.2 ZNF121 TAL1 ZBTB33 MLLT1 EP300 APOOP4 TMPRSS11BNL YTHDC1
GH04G068346 1.6 Ensembl ENCODE dbSUPER 0.3 -43.8 -43823 5.2 HDGF PKNOX1 FOXA2 CREB3L1 WRNIP1 ARID4B SIN3A DMAP1 ZNF2 YY1 CENPC UBA6 UGT2B29P TMPRSS11BNL YTHDC1 APOOP4
GH04G068343 0.5 Ensembl dbSUPER 0.3 -38.1 -38135 0.2 YTHDC1 APOOP4
GH04G068341 0.4 dbSUPER 0.3 -37.1 -37068 1.0 RFX1 FOXJ2 YTHDC1 APOOP4
GH04G068334 0.2 dbSUPER 0.3 -29.6 -29566 0.8 YTHDC1 APOOP4
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around APOOP4 on UCSC Golden Path with GeneCards custom track

Genomic Location for APOOP4 Gene

Chromosome:
4
Start:
68,304,168 bp from pter
End:
68,304,966 bp from pter
Size:
799 bases
Orientation:
Minus strand

Genomic View for APOOP4 Gene

Genes around APOOP4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
APOOP4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for APOOP4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for APOOP4 Gene

Proteins for APOOP4 Gene

Post-translational modifications for APOOP4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for APOOP4 Gene

Domains & Families for APOOP4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for APOOP4 Gene

Function for APOOP4 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for APOOP4 Gene

Localization for APOOP4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for APOOP4 Gene

Pathways & Interactions for APOOP4 Gene

SuperPathways for APOOP4 Gene

No Data Available

Interacting Proteins for APOOP4 Gene

Gene Ontology (GO) - Biological Process for APOOP4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for APOOP4 Gene

Drugs & Compounds for APOOP4 Gene

No Compound Related Data Available

Transcripts for APOOP4 Gene

mRNA/cDNA for APOOP4 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for APOOP4 Gene

No ASD Table

Relevant External Links for APOOP4 Gene

GeneLoc Exon Structure for
APOOP4
ECgene alternative splicing isoforms for
APOOP4

Expression for APOOP4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for APOOP4 Gene

mRNA differential expression in normal tissues according to GTEx for APOOP4 Gene

This gene is overexpressed in Pituitary (x34.4), Testis (x6.1), and Esophagus - Mucosa (x4.7).

NURSA nuclear receptor signaling pathways regulating expression of APOOP4 Gene:

APOOP4
genes like me logo Genes that share expression patterns with APOOP4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for APOOP4 Gene

Orthologs for APOOP4 Gene

Evolution for APOOP4 Gene

ENSEMBL:
Gene Tree for APOOP4 (if available)
TreeFam:
Gene Tree for APOOP4 (if available)

No data available for Orthologs for APOOP4 Gene

Paralogs for APOOP4 Gene

No data available for Paralogs for APOOP4 Gene

Variants for APOOP4 Gene

Relevant External Links for APOOP4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
APOOP4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for APOOP4 Gene

Disorders for APOOP4 Gene

No disorders were found for APOOP4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for APOOP4 Gene

Publications for APOOP4 Gene

  1. Toward a complete human genome sequence. (PMID: 9847074) Sulston J.E. … Waterston R. (Genome Res. 1998) 3 64

Products for APOOP4 Gene

Sources for APOOP4 Gene

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