Aliases for APOOP4 Gene
External Ids for APOOP4 Gene
- HGNC: 48742
- Entrez Gene: 100128725
- Ensembl: ENSG00000248122
Previous GeneCards Identifiers for APOOP4 Gene
- GC04M069169
Summaries for APOOP4 Gene
GeneCards Summary for APOOP4 Gene
APOOP4 (Apolipoprotein O Pseudogene 4) is a Pseudogene.
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for APOOP4 Gene
Genomics for APOOP4 Gene
Regulatory Elements for APOOP4 Gene
Enhancers for APOOP4 Gene
| GeneHancer Identifier | Enhancer Score | Enhancer Sources | Gene-Enhancer Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites within enhancer | Gene Targets for Enhancer |
|---|---|---|---|---|---|---|---|---|
| GH04G068344 | 0.8 | Ensembl dbSUPER | 5 | -40.0 | -40035 | 1.2 | ZNF121 TAL1 ZBTB33 MLLT1 EP300 | APOOP4 TMPRSS11BNL YTHDC1 |
| GH04G068346 | 1.6 | Ensembl ENCODE dbSUPER | 0.3 | -43.8 | -43823 | 5.2 | HDGF PKNOX1 FOXA2 CREB3L1 WRNIP1 ARID4B SIN3A DMAP1 ZNF2 YY1 | CENPC UBA6 UGT2B29P TMPRSS11BNL YTHDC1 APOOP4 |
| GH04G068343 | 0.5 | Ensembl dbSUPER | 0.3 | -38.1 | -38135 | 0.2 | YTHDC1 APOOP4 | |
| GH04G068341 | 0.4 | dbSUPER | 0.3 | -37.1 | -37068 | 1.0 | RFX1 FOXJ2 | YTHDC1 APOOP4 |
| GH04G068340 | 0.2 | dbSUPER | 0.3 | -34.8 | -34841 | 1.0 | YTHDC1 APOOP4 |
- Elite enhancer and/or Elite enhancer-gene association
Download GeneHancer data dump
Enhancers around APOOP4 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Location for APOOP4 Gene
- Chromosome:
- 4
- Start:
- 68,304,168 bp from pter
- End:
- 68,304,966 bp from pter
- Size:
- 799 bases
- Orientation:
- Minus strand
Genomic View for APOOP4 Gene
Genes around APOOP4 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 4q13.2 by Ensembl
- 4q13.2 by Entrez Gene
- 4q13.2 by HGNC
APOOP4 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for APOOP4 Gene
Proteins for APOOP4 Gene
Post-translational modifications for APOOP4 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for APOOP4
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for APOOP4
- Origene Custom Protein Services for APOOP4
- Search GeneTex for Proteins for APOOP4
Assay Products
No data available for DME Specific Peptides for APOOP4 Gene
Domains & Families for APOOP4 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for APOOP4 Gene
Function for APOOP4 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for APOOP4
-
- Search ViGene Biosciences for APOOP4
CRISPR Products
- Browse CRISPR knockouts for APOOP4
miRNA Products
- Search ViGene Biosciences for APOOP4
Inhibitory RNA Products
- Search ViGene Biosciences for APOOP4
Clone Products
- GenScript: Custom all cDNA clones Services for APOOP4
- VectorBuilder custom plasmid, inducible vectors for APOOP4
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for APOOP4
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Cell Line Products
- Search ViGene Biosciences for APOOP4
Flow Cytometry Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for APOOP4 Gene
Localization for APOOP4 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for APOOP4 Gene
Transcripts for APOOP4 Gene
mRNA/cDNA for APOOP4 Gene
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
CRISPR Products
- Browse CRISPR knockouts for APOOP4
miRNA Products
- Search ViGene Biosciences for APOOP4
Inhibitory RNA Products
- Search ViGene Biosciences for APOOP4
Clone Products
- GenScript: Custom all cDNA clones Services for APOOP4
- VectorBuilder custom plasmid, inducible vectors for APOOP4
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for APOOP4
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Flow Cytometry Products
Expression for APOOP4 Gene
mRNA differential expression in normal tissues according to GTEx for APOOP4 Gene
This gene is overexpressed in Pituitary (x34.4), Testis (x6.1), and Esophagus - Mucosa (x4.7).
NURSA nuclear receptor signaling pathways regulating expression of APOOP4 Gene:
APOOP4
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for APOOP4 Gene
Orthologs for APOOP4 Gene
No data available for Orthologs for APOOP4 Gene
Paralogs for APOOP4 Gene
No data available for Paralogs for APOOP4 Gene
Variants for APOOP4 Gene
Relevant External Links for APOOP4 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- APOOP4
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for APOOP4 Gene
Disorders for APOOP4 Gene
No disorders were found for APOOP4 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for APOOP4 Gene
Publications for APOOP4 Gene
- Toward a complete human genome sequence. (PMID: 9847074) Sulston J.E. … Waterston R. (Genome Res. 1998) 3 64
Products for APOOP4 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
- Browse DNA Damage and Repair Kits
- Browse ELISpot/FluoroSpot Kits and Development Modules
- Browse Flow Cytometry Kits
- Browse Immunoprecipitation Assays
- Browse Luminex Assays
- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
- Browse Small Molecules
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for APOOP4
- Origene Custom Protein Services for APOOP4
- Browse OriGene Inhibitory RNA Products For APOOP4
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for APOOP4
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For APOOP4
- GenScript: Custom all cDNA clones Services for APOOP4
- GenScript Custom Purified and Recombinant Proteins Services for APOOP4
- GenScript Custom Assay Services for APOOP4
- GenScript Custom overexpressing Cell Line Services for APOOP4
- Browse GenScript CRISPR for APOOP4
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
- Gene Synthesis: Any Gene in Any Vector
- Vector-based siRNA and miRNA, Ready for Transfection
- Gene Mutant Library, Variants up to 10^11
- Plasmid Preparation
- GenScript Custom Peptide Services for APOOP4
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Proteins
- Sino Biological Antibodies
- Sino Biological ELISA Kits and Pair Sets
- Sino Biological Cell Lysates
- Sino Biological qPCR Primers
- Sino Biological CRO Services for Proteins, Antibodies and Genes
- Sino Biological Transfection Reagents
- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- Cyagen custom Knockout/knockin (KOKI) mouse models for APOOP4
- VectorBuilder custom plasmid, inducible vectors for APOOP4
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for APOOP4
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Sources for APOOP4 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) RNAdb
- (29) ASD
- (30) ECgene
- (31) GeneAnnot
- (32) CGAP SAGE
- (33) SOURCE
- (34) HomoloGene
- (35) PanEnsembl
- (36) euGenes
- (37) SGD
- (38) FlyBase
- (39) WormBase
- (40) Pseudogene
- (41) DGV
- (42) dbSNP
- (43) GenAtlas
- (44) GeneTests
- (45) HGMD
- (46) GAD
- (47) LSDB
- (48) BGMUT
- (49) HuGE
- (50) eBioscience
- (51) Atlas
- (52) Cell Signaling Technology
- (53) GenBank
- (54) H-invDB
- (55) HORDE
- (56) HUGE
- (57) IMGT
- (58) Leiden
- (59) MILLIPORE
- (60) miRBase
- (61) DME
- (62) NCBI
- (63) OriGene
- (64) PubMed
- (65) R&D Systems
- (66) TGDB
- (67) Tocris
- (68) Abcam
- (69) Novus
- (70) ProSpec
- (71) Sino Biological
- (72) GenScript
- (73) Qiagen
- (74) Cloud-Clone Corp.
- (75) Enzo Life Sciences
- (76) OCA
- (77) Proteopedia
- (78) MOPED
- (79) SPIRE
- (80) neXtProt
- (81) Reactome
- (82) GeneGo (Thomson Reuters)
- (83) fRNAdb
- (84) DISEASES
- (85) SIMAP
- (86) GenomeRNAi
- (87) LifeMap
- (88) miRTarBase
- (89) MalaCards
- (90) Invitrogen
- (91) BitterDB
- (92) Vector BioLabs
- (93) ESI-BIO
- (94) RefSeq
- (95) BioSystems
- (96) MaxQB
- (97) IUPHAR
- (98) BioGPS
- (99) Illumina
- (100) COMPARTMENTS
- (101) HOMER
- (102) PaxDb
- (103) ApexBio
- (104) Addgene
- (105) antibodies-online
- (106) CYP
- (107) NONCODE
- (108) SwitchGear Genomics
- (109) TreeFam
- (110) PathCards
- (111) GeneReviews
- (112) GeneTex
- (113) Taconic Biosciences
- (114) GTEx
- (115) ProteomicsDB
- (116) SCBT
- (117) DGIdb
- (118) ClinicalTrials
- (119) FDA Approved Drugs
- (120) RVIS
- (121) SIGNOR
- (122) diseasecard
- (123) NIH Rare Diseases
- (124) Orphanet
- (125) UMLS
- (126) GTR
- (127) Disease Ontology
- (128) Genetics Home Reference
- (129) MeSH
- (130) MedlinePlus
- (131) CDC
- (132) NINDS
- (133) NCBI Bookshelf
- (134) ClinVar
- (135) Gene Damage Index
- (136) ViGene Biosciences
- (137) HPO
- (138) UDN
- (139) VISTA
- (140) FANTOM5
- (141) ENCODE
- (142) ProSci
- (143) Horizon
- (144) NURSA
- (145) IID
- (146) Cyagen
- (147) VectorBuilder
- (148) SNPedia
- (149) BRCA Exchange
- (150) St John's Lab
- (151) CIViC
- (152) ProteoGenix
- (153) dbSUPER
- (154) TISSUES
- (155) Gene ORGANizer