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Aliases for APOOP1 Gene

Aliases for APOOP1 Gene

  • Apolipoprotein O Pseudogene 1 2 3 5

External Ids for APOOP1 Gene

Previous GeneCards Identifiers for APOOP1 Gene

  • GC05P156351

Summaries for APOOP1 Gene

GeneCards Summary for APOOP1 Gene

APOOP1 (Apolipoprotein O Pseudogene 1) is a Pseudogene.

Additional gene information for APOOP1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for APOOP1 Gene

Genomics for APOOP1 Gene

Regulatory Elements for APOOP1 Gene

Enhancers for APOOP1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05H156919 1.1 ENCODE dbSUPER 15.2 -3.5 -3463 1 HDGF TBL1XR1 BACH1 BMI1 EBF1 BATF RELA EED ATF7 RUNX3 APOOP1 TIMD4 GC05P156904
GH05H157048 1.1 FANTOM5 ENCODE 12.6 +125.6 125635 2 ELF3 SOX13 CEBPG RARA TEAD3 NR2F6 SOX5 TEAD1 HLF CEBPB HAVCR1 APOOP1 TIMD4
GH05H156926 0.2 dbSUPER 18.9 +4.3 4282 3 APOOP1 GC05P156925 GC05M156933
GH05H156912 1.2 Ensembl ENCODE dbSUPER 0.4 -10.1 -10144 2 PKNOX1 ZNF687 MAZ ELF1 DPF2 ETS1 POLR2A EED IKZF1 POU5F1 TIMD4 GC05P156904 APOOP1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around APOOP1 on UCSC Golden Path with GeneCards custom track

Genomic Location for APOOP1 Gene

Chromosome:
5
Start:
156,924,089 bp from pter
End:
156,925,003 bp from pter
Size:
915 bases
Orientation:
Plus strand

Genomic View for APOOP1 Gene

Genes around APOOP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
APOOP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for APOOP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for APOOP1 Gene

Proteins for APOOP1 Gene

Post-translational modifications for APOOP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for APOOP1 Gene

Domains & Families for APOOP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for APOOP1 Gene

Function for APOOP1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for APOOP1 Gene

Localization for APOOP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for APOOP1 Gene

Pathways & Interactions for APOOP1 Gene

SuperPathways for APOOP1 Gene

No Data Available

Interacting Proteins for APOOP1 Gene

Gene Ontology (GO) - Biological Process for APOOP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for APOOP1 Gene

Drugs & Compounds for APOOP1 Gene

No Compound Related Data Available

Transcripts for APOOP1 Gene

mRNA/cDNA for APOOP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for APOOP1 Gene

No ASD Table

Relevant External Links for APOOP1 Gene

GeneLoc Exon Structure for
APOOP1
ECgene alternative splicing isoforms for
APOOP1

Expression for APOOP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for APOOP1 Gene

mRNA differential expression in normal tissues according to GTEx for APOOP1 Gene

This gene is overexpressed in Testis (x40.0), Liver (x8.8), and Thyroid (x4.2).

NURSA nuclear receptor signaling pathways regulating expression of APOOP1 Gene:

APOOP1
genes like me logo Genes that share expression patterns with APOOP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for APOOP1 Gene

Orthologs for APOOP1 Gene

Evolution for APOOP1 Gene

ENSEMBL:
Gene Tree for APOOP1 (if available)
TreeFam:
Gene Tree for APOOP1 (if available)

No data available for Orthologs for APOOP1 Gene

Paralogs for APOOP1 Gene

No data available for Paralogs for APOOP1 Gene

Variants for APOOP1 Gene

Relevant External Links for APOOP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
APOOP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for APOOP1 Gene

Disorders for APOOP1 Gene

No disorders were found for APOOP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for APOOP1 Gene

Publications for APOOP1 Gene

No publications were found for APOOP1 Gene.

Products for APOOP1 Gene

Sources for APOOP1 Gene

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