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Aliases for APOC1P1 Gene

Aliases for APOC1P1 Gene

  • Apolipoprotein C-I Pseudogene 1 2 3

External Ids for APOC1P1 Gene

Previous GeneCards Identifiers for APOC1P1 Gene

  • GC19U990003
  • GC19P045430

Summaries for APOC1P1 Gene

GeneCards Summary for APOC1P1 Gene

APOC1P1 (Apolipoprotein C-I Pseudogene 1) is a Pseudogene. Diseases associated with APOC1P1 include intrahepatic cholangiocarcinoma.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for APOC1P1 Gene

Genomics for APOC1P1 Gene

Genomic Location for APOC1P1 Gene

44,926,803 bp from pter
44,931,386 bp from pter
4,584 bases
Plus strand

Genomic View for APOC1P1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for APOC1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for APOC1P1 Gene

No data available for Regulatory Elements for APOC1P1 Gene

Proteins for APOC1P1 Gene

Post-translational modifications for APOC1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for APOC1P1 Gene

Domains for APOC1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for APOC1P1 Gene

Function for APOC1P1 Gene

Molecular function for APOC1P1 Gene

GENATLAS Biochemistry:
apolipoprotein C-I,pseudogene 1

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for APOC1P1 Gene

Localization for APOC1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for APOC1P1 Gene

Pathways for APOC1P1 Gene

SuperPathways for APOC1P1 Gene

No Data Available

Interacting Proteins for APOC1P1 Gene

Gene Ontology (GO) - Biological Process for APOC1P1 Gene


No data available for Pathways by source for APOC1P1 Gene

Transcripts for APOC1P1 Gene

mRNA/cDNA for APOC1P1 Gene

(4) Additional mRNA sequences :
(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for APOC1P1 Gene

Apolipoprotein C-I pseudogene 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for APOC1P1 Gene

No ASD Table

Relevant External Links for APOC1P1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for APOC1P1 Gene

mRNA expression in normal human tissues for APOC1P1 Gene

mRNA differential expression in normal tissues according to GTEx for APOC1P1 Gene

This gene is overexpressed in Liver (45.7).

SOURCE GeneReport for Unigene cluster for APOC1P1 Gene Hs.729930

genes like me logo Genes that share expressions with APOC1P1: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for APOC1P1 Gene

Orthologs for APOC1P1 Gene

Evolution for APOC1P1 Gene

Gene Tree for APOC1P1 (if available)
Gene Tree for APOC1P1 (if available)

No data available for Orthologs for APOC1P1 Gene

Paralogs for APOC1P1 Gene

No data available for Paralogs for APOC1P1 Gene

Variants for APOC1P1 Gene

Sequence variations from dbSNP and Humsavar for APOC1P1 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type MAF
rs5112 -- 44,927,023(+) TCGAT(C/G)GTCTT nc-transcript-variant
rs149345 -- 44,924,826(-) agggg(A/C)aggtt upstream-variant-2KB
rs442706 -- 44,926,947(+) GCCTC(C/T)GCCTC nc-transcript-variant, intron-variant
rs4803772 -- 44,925,202(+) TCCTG(C/T)CTCAG upstream-variant-2KB
rs7255574 -- 44,931,617(+) CCCAT(A/C)TACTT downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for APOC1P1 Gene

Variant ID Type Subtype PubMed ID
dgv3948n71 CNV Loss 21882294
nsv509747 CNV Insertion 20534489
nsv912133 CNV Loss 21882294
nsv912134 CNV Loss 21882294

Relevant External Links for APOC1P1 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for APOC1P1 Gene

Disorders for APOC1P1 Gene

MalaCards: The human disease database

MalaCards: The human disease database.

Search for APOC1P1 Gene in MalaCards »

(1) Diseases for APOC1P1 Gene including...

Relevant External Links for APOC1P1

Genetic Association Database (GAD)
genes like me logo Genes that share disorders with APOC1P1: view

No data available for OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships and Genatlas for APOC1P1 Gene

Publications for APOC1P1 Gene

  1. Genome-wide association study identifies novel loci associated with circulating phospho- and sphingolipid concentrations. (PMID: 22359512) Demirkan A. … Schmitz G. (PLoS Genet. 2012) 3 48
  2. Two copies of the human apolipoprotein C-I gene are linked closely to the apolipoprotein E gene. (PMID: 2835369) Lauer S.J. … Taylor J.M. (J. Biol. Chem. 1988) 3
  3. Insight into hepatocellular carcinogenesis at transcriptome level by comparing gene expression profiles of hepatocellular carcinoma with those of corresponding noncancerous liver. (PMID: 11752456) Xu X.R. … Han Z.G. (Proc. Natl. Acad. Sci. U.S.A. 2001) 3
  4. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  5. Identification of intrahepatic cholangiocarcinoma related genes by comparison with normal liver tissues using expressed sequence tags. (PMID: 16712791) Wang A.G. … Kim N.S. (Biochem. Biophys. Res. Commun. 2006) 3

Products for APOC1P1 Gene

Sources for APOC1P1 Gene

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