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Aliases for APOBEC3B-AS1 Gene

Subcategory (RNA class) for APOBEC3B-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for APOBEC3B-AS1 Gene

  • APOBEC3B Antisense RNA 1 2 3 5
  • APOBEC3B Antisense RNA 1 (Non-Protein Coding) 2 3
  • CTA-150C2.16 3

External Ids for APOBEC3B-AS1 Gene

Previous GeneCards Identifiers for APOBEC3B-AS1 Gene

  • GC22M039388
  • GC22M039468
  • GC22M040103
  • GC22M039079
  • GC22M039827

Summaries for APOBEC3B-AS1 Gene

GeneCards Summary for APOBEC3B-AS1 Gene

APOBEC3B-AS1 (APOBEC3B Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for APOBEC3B-AS1 Gene

Genomics for APOBEC3B-AS1 Gene

Regulatory Elements for APOBEC3B-AS1 Gene

Enhancers for APOBEC3B-AS1 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around APOBEC3B-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for APOBEC3B-AS1 Gene

Chromosome:
22
Start:
38,991,559 bp from pter
End:
38,998,220 bp from pter
Size:
6,662 bases
Orientation:
Minus strand

Genomic View for APOBEC3B-AS1 Gene

Genes around APOBEC3B-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
APOBEC3B-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for APOBEC3B-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for APOBEC3B-AS1 Gene

Proteins for APOBEC3B-AS1 Gene

Post-translational modifications for APOBEC3B-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for APOBEC3B-AS1 Gene

Domains & Families for APOBEC3B-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for APOBEC3B-AS1 Gene

Function for APOBEC3B-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for APOBEC3B-AS1 Gene

Localization for APOBEC3B-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for APOBEC3B-AS1 Gene

Pathways & Interactions for APOBEC3B-AS1 Gene

SuperPathways for APOBEC3B-AS1 Gene

No Data Available

Interacting Proteins for APOBEC3B-AS1 Gene

Gene Ontology (GO) - Biological Process for APOBEC3B-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for APOBEC3B-AS1 Gene

Drugs & Compounds for APOBEC3B-AS1 Gene

No Compound Related Data Available

Transcripts for APOBEC3B-AS1 Gene

mRNA/cDNA for APOBEC3B-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for APOBEC3B-AS1 Gene

No ASD Table

Relevant External Links for APOBEC3B-AS1 Gene

GeneLoc Exon Structure for
APOBEC3B-AS1
ECgene alternative splicing isoforms for
APOBEC3B-AS1

Expression for APOBEC3B-AS1 Gene

mRNA expression in normal human tissues for APOBEC3B-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for APOBEC3B-AS1 Gene

This gene is overexpressed in Whole Blood (x22.1).
genes like me logo Genes that share expression patterns with APOBEC3B-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for APOBEC3B-AS1 Gene

Orthologs for APOBEC3B-AS1 Gene

Evolution for APOBEC3B-AS1 Gene

ENSEMBL:
Gene Tree for APOBEC3B-AS1 (if available)
TreeFam:
Gene Tree for APOBEC3B-AS1 (if available)

No data available for Orthologs for APOBEC3B-AS1 Gene

Paralogs for APOBEC3B-AS1 Gene

No data available for Paralogs for APOBEC3B-AS1 Gene

Variants for APOBEC3B-AS1 Gene

Sequence variations from dbSNP and Humsavar for APOBEC3B-AS1 Gene

SNP ID Clin Chr 22 pos Sequence Context AA Info Type
rs2103583 -- 38,993,383(+) TTTAT(A/G)TGCCT intron-variant
rs2103584 -- 38,993,440(+) AAGCC(A/G)CGTAT intron-variant
rs2103585 -- 38,993,442(+) GCCAC(A/G)TATAA intron-variant
rs2142833 -- 38,996,291(+) CTGAA(A/G)GAGGA intron-variant
rs2179233 -- 38,996,385(+) AAGGA(C/G)AGGGA intron-variant

Relevant External Links for APOBEC3B-AS1 Gene

HapMap Linkage Disequilibrium report
APOBEC3B-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for APOBEC3B-AS1 Gene

Disorders for APOBEC3B-AS1 Gene

Relevant External Links for APOBEC3B-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
APOBEC3B-AS1

No disorders were found for APOBEC3B-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for APOBEC3B-AS1 Gene

Publications for APOBEC3B-AS1 Gene

No publications were found for APOBEC3B-AS1 Gene.

Products for APOBEC3B-AS1 Gene

Sources for APOBEC3B-AS1 Gene

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