Aliases for APOBEC3AP1 Gene
Aliases for APOBEC3AP1 Gene
External Ids for APOBEC3AP1 Gene
- HGNC: 43835
- Entrez Gene: 105377532
- Ensembl: ENSG00000248822
Previous GeneCards Identifiers for APOBEC3AP1 Gene
- GC04P171021
Summaries for APOBEC3AP1 Gene
GeneCards Summary for APOBEC3AP1 Gene
APOBEC3AP1 (Apolipoprotein B MRNA Editing Enzyme Catalytic Subunit 3A Pseudogene 1) is a Pseudogene.
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for APOBEC3AP1 Gene
Genomics for APOBEC3AP1 Gene
Regulatory Elements for APOBEC3AP1 Gene
Enhancers for APOBEC3AP1 Gene
| GeneHancer Identifier | Enhancer Score | Enhancer Sources | Gene-Enhancer Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites within enhancer | Gene Targets for Enhancer |
|---|---|---|---|---|---|---|---|---|
| GH04G170101 | 0.8 | ENCODE | 0.4 | +10.4 | 10355 | 1.2 | SOX13 FOXA2 SAP130 TAF1 MAX CEBPG ZNF384 CHD7 ZNF644 RAD21 | AADAT APOBEC3AP1 PIR59480 |
| GH04G170109 | 0.6 | Ensembl ENCODE | 0.4 | +17.7 | 17746 | 1.1 | EP300 | AADAT APOBEC3AP1 PIR59480 |
| GH04G170121 | 0.5 | ENCODE | 0.3 | +30.2 | 30156 | 1.0 | CTBP1 GATA3 DPF2 | AADAT PIR59480 APOBEC3AP1 |
- Elite enhancer and/or Elite enhancer-gene association
Download GeneHancer data dump
Enhancers around APOBEC3AP1 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Location for APOBEC3AP1 Gene
- Chromosome:
- 4
- Start:
- 170,092,143 bp from pter
- End:
- 170,107,095 bp from pter
- Size:
- 14,953 bases
- Orientation:
- Plus strand
Genomic View for APOBEC3AP1 Gene
Genes around APOBEC3AP1 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 4q33 by Ensembl
- 4q33 by Entrez Gene
- 4q33 by HGNC
APOBEC3AP1 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for APOBEC3AP1 Gene
Proteins for APOBEC3AP1 Gene
Post-translational modifications for APOBEC3AP1 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for APOBEC3AP1
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for APOBEC3AP1
- Origene Custom Protein Services for APOBEC3AP1
- Search GeneTex for Proteins for APOBEC3AP1
Assay Products
No data available for DME Specific Peptides for APOBEC3AP1 Gene
Domains & Families for APOBEC3AP1 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for APOBEC3AP1 Gene
Function for APOBEC3AP1 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for APOBEC3AP1
-
- Search ViGene Biosciences for APOBEC3AP1
CRISPR Products
- Browse CRISPR knockouts for APOBEC3AP1
miRNA Products
- Search ViGene Biosciences for APOBEC3AP1
Inhibitory RNA Products
- Search ViGene Biosciences for APOBEC3AP1
Clone Products
- VectorBuilder custom plasmid, inducible vectors for APOBEC3AP1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for APOBEC3AP1
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Cell Line Products
- Search ViGene Biosciences for APOBEC3AP1
Flow Cytometry Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for APOBEC3AP1 Gene
Localization for APOBEC3AP1 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for APOBEC3AP1 Gene
Transcripts for APOBEC3AP1 Gene
mRNA/cDNA for APOBEC3AP1 Gene
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
CRISPR Products
- Browse CRISPR knockouts for APOBEC3AP1
miRNA Products
- Search ViGene Biosciences for APOBEC3AP1
Inhibitory RNA Products
- Search ViGene Biosciences for APOBEC3AP1
Clone Products
- VectorBuilder custom plasmid, inducible vectors for APOBEC3AP1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for APOBEC3AP1
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Flow Cytometry Products
Relevant External Links for APOBEC3AP1 Gene
- GeneLoc Exon Structure for
- APOBEC3AP1
- ECgene alternative splicing isoforms for
- APOBEC3AP1
Expression for APOBEC3AP1 Gene
mRNA differential expression in normal tissues according to GTEx for APOBEC3AP1 Gene
This gene is overexpressed in Testis (x47.5) and Lung (x5.5).
NURSA nuclear receptor signaling pathways regulating expression of APOBEC3AP1 Gene:
APOBEC3AP1
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for APOBEC3AP1 Gene
Orthologs for APOBEC3AP1 Gene
Evolution for APOBEC3AP1 Gene
- ENSEMBL:
- Gene Tree for APOBEC3AP1 (if available)
- TreeFam:
- Gene Tree for APOBEC3AP1 (if available)
No data available for Orthologs for APOBEC3AP1 Gene
Paralogs for APOBEC3AP1 Gene
No data available for Paralogs for APOBEC3AP1 Gene
Variants for APOBEC3AP1 Gene
Relevant External Links for APOBEC3AP1 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- APOBEC3AP1
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for APOBEC3AP1 Gene
Disorders for APOBEC3AP1 Gene
No disorders were found for APOBEC3AP1 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for APOBEC3AP1 Gene
Publications for APOBEC3AP1 Gene
No publications were found for APOBEC3AP1 Gene.
Products for APOBEC3AP1 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
- Browse DNA Damage and Repair Kits
- Browse ELISpot/FluoroSpot Kits and Development Modules
- Browse Flow Cytometry Kits
- Browse Immunoprecipitation Assays
- Browse Luminex Assays
- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
- Browse Small Molecules
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for APOBEC3AP1
- Origene Custom Protein Services for APOBEC3AP1
- Browse OriGene Inhibitory RNA Products For APOBEC3AP1
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for APOBEC3AP1
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For APOBEC3AP1
- GenScript: Next-day shipping cDNA ORF clone for APOBEC3AP1 in any vector
- GenScript Custom Purified and Recombinant Proteins Services for APOBEC3AP1
- GenScript Custom Assay Services for APOBEC3AP1
- GenScript Custom overexpressing Cell Line Services for APOBEC3AP1
- Browse GenScript CRISPR for APOBEC3AP1
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
- Gene Synthesis: Any Gene in Any Vector
- Vector-based siRNA and miRNA, Ready for Transfection
- Gene Mutant Library, Variants up to 10^11
- Plasmid Preparation
- GenScript Custom Peptide Services for APOBEC3AP1
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Proteins
- Sino Biological Antibodies
- Sino Biological ELISA Kits and Pair Sets
- Sino Biological Cell Lysates
- Sino Biological qPCR Primers
- Sino Biological CRO Services for Proteins, Antibodies and Genes
- Sino Biological Transfection Reagents
- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- Cyagen custom Knockout/knockin (KOKI) mouse models for APOBEC3AP1
- VectorBuilder custom plasmid, inducible vectors for APOBEC3AP1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for APOBEC3AP1
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Sources for APOBEC3AP1 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) RNAdb
- (29) ASD
- (30) ECgene
- (31) GeneAnnot
- (32) CGAP SAGE
- (33) SOURCE
- (34) HomoloGene
- (35) PanEnsembl
- (36) euGenes
- (37) SGD
- (38) FlyBase
- (39) WormBase
- (40) Pseudogene
- (41) DGV
- (42) dbSNP
- (43) GenAtlas
- (44) GeneTests
- (45) HGMD
- (46) GAD
- (47) LSDB
- (48) BGMUT
- (49) HuGE
- (50) eBioscience
- (51) Atlas
- (52) Cell Signaling Technology
- (53) GenBank
- (54) H-invDB
- (55) HORDE
- (56) HUGE
- (57) IMGT
- (58) Leiden
- (59) MILLIPORE
- (60) miRBase
- (61) DME
- (62) NCBI
- (63) OriGene
- (64) PubMed
- (65) R&D Systems
- (66) TGDB
- (67) Tocris
- (68) Abcam
- (69) Novus
- (70) ProSpec
- (71) Sino Biological
- (72) GenScript
- (73) Qiagen
- (74) Cloud-Clone Corp.
- (75) Enzo Life Sciences
- (76) OCA
- (77) Proteopedia
- (78) MOPED
- (79) SPIRE
- (80) neXtProt
- (81) Reactome
- (82) GeneGo (Thomson Reuters)
- (83) fRNAdb
- (84) DISEASES
- (85) SIMAP
- (86) GenomeRNAi
- (87) LifeMap
- (88) miRTarBase
- (89) MalaCards
- (90) Invitrogen
- (91) BitterDB
- (92) Vector BioLabs
- (93) ESI-BIO
- (94) RefSeq
- (95) BioSystems
- (96) MaxQB
- (97) IUPHAR
- (98) BioGPS
- (99) Illumina
- (100) COMPARTMENTS
- (101) HOMER
- (102) PaxDb
- (103) ApexBio
- (104) Addgene
- (105) antibodies-online
- (106) CYP
- (107) NONCODE
- (108) SwitchGear Genomics
- (109) TreeFam
- (110) PathCards
- (111) GeneReviews
- (112) GeneTex
- (113) Taconic Biosciences
- (114) GTEx
- (115) ProteomicsDB
- (116) SCBT
- (117) DGIdb
- (118) ClinicalTrials
- (119) FDA Approved Drugs
- (120) RVIS
- (121) SIGNOR
- (122) diseasecard
- (123) NIH Rare Diseases
- (124) Orphanet
- (125) UMLS
- (126) GTR
- (127) Disease Ontology
- (128) Genetics Home Reference
- (129) MeSH
- (130) MedlinePlus
- (131) CDC
- (132) NINDS
- (133) NCBI Bookshelf
- (134) ClinVar
- (135) Gene Damage Index
- (136) ViGene Biosciences
- (137) HPO
- (138) UDN
- (139) VISTA
- (140) FANTOM5
- (141) ENCODE
- (142) ProSci
- (143) Horizon
- (144) NURSA
- (145) IID
- (146) Cyagen
- (147) VectorBuilder
- (148) SNPedia
- (149) BRCA Exchange
- (150) St John's Lab
- (151) CIViC
- (152) ProteoGenix
- (153) dbSUPER
- (154) TISSUES
- (155) Gene ORGANizer