Free for academic non-profit institutions. Other users need a Commercial license

Aliases for APOBEC3AP1 Gene

Aliases for APOBEC3AP1 Gene

  • Apolipoprotein B MRNA Editing Enzyme Catalytic Subunit 3A Pseudogene 1 2 3
  • Apolipoprotein B MRNA Editing Enzyme, Catalytic Polypeptide-Like 3A Pseudogene 1 2 5

External Ids for APOBEC3AP1 Gene

Previous GeneCards Identifiers for APOBEC3AP1 Gene

  • GC04P171021

Summaries for APOBEC3AP1 Gene

GeneCards Summary for APOBEC3AP1 Gene

APOBEC3AP1 (Apolipoprotein B MRNA Editing Enzyme Catalytic Subunit 3A Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for APOBEC3AP1 Gene

Genomics for APOBEC3AP1 Gene

Genomic Location for APOBEC3AP1 Gene

Chromosome:
4
Start:
170,092,143 bp from pter
End:
170,107,095 bp from pter
Size:
14,953 bases
Orientation:
Plus strand

Genomic View for APOBEC3AP1 Gene

Genes around APOBEC3AP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
APOBEC3AP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for APOBEC3AP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for APOBEC3AP1 Gene

No data available for Regulatory Elements for APOBEC3AP1 Gene

Proteins for APOBEC3AP1 Gene

Post-translational modifications for APOBEC3AP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for APOBEC3AP1 Gene

Domains & Families for APOBEC3AP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for APOBEC3AP1 Gene

Function for APOBEC3AP1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for APOBEC3AP1 Gene

Localization for APOBEC3AP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for APOBEC3AP1 Gene

Pathways & Interactions for APOBEC3AP1 Gene

SuperPathways for APOBEC3AP1 Gene

No Data Available

Interacting Proteins for APOBEC3AP1 Gene

Gene Ontology (GO) - Biological Process for APOBEC3AP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for APOBEC3AP1 Gene

Drugs & Compounds for APOBEC3AP1 Gene

No Compound Related Data Available

Transcripts for APOBEC3AP1 Gene

mRNA/cDNA for APOBEC3AP1 Gene

(2) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for APOBEC3AP1 Gene

No ASD Table

Relevant External Links for APOBEC3AP1 Gene

GeneLoc Exon Structure for
APOBEC3AP1
ECgene alternative splicing isoforms for
APOBEC3AP1

Expression for APOBEC3AP1 Gene

mRNA expression in normal human tissues for APOBEC3AP1 Gene

mRNA differential expression in normal tissues according to GTEx for APOBEC3AP1 Gene

This gene is overexpressed in Testis (x47.5) and Lung (x5.5).
genes like me logo Genes that share expression patterns with APOBEC3AP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for APOBEC3AP1 Gene

Orthologs for APOBEC3AP1 Gene

Evolution for APOBEC3AP1 Gene

ENSEMBL:
Gene Tree for APOBEC3AP1 (if available)
TreeFam:
Gene Tree for APOBEC3AP1 (if available)

No data available for Orthologs for APOBEC3AP1 Gene

Paralogs for APOBEC3AP1 Gene

No data available for Paralogs for APOBEC3AP1 Gene

Variants for APOBEC3AP1 Gene

Sequence variations from dbSNP and Humsavar for APOBEC3AP1 Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type
rs1351399 -- 170,094,236(+) AGTGG(G/T)GGGGA intron-variant
rs899873 -- 170,096,962(+) AAATC(G/T)TGTCA intron-variant
rs899874 -- 170,097,172(+) GTGTA(A/G)GTATG intron-variant
rs2727518 -- 170,100,346(+) CCACT(A/G)TGTAG intron-variant
rs2727526 -- 170,096,487(-) CTCAA(C/T)AGGGA intron-variant

Relevant External Links for APOBEC3AP1 Gene

HapMap Linkage Disequilibrium report
APOBEC3AP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for APOBEC3AP1 Gene

Disorders for APOBEC3AP1 Gene

No disorders were found for APOBEC3AP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for APOBEC3AP1 Gene

Publications for APOBEC3AP1 Gene

No publications were found for APOBEC3AP1 Gene.

Products for APOBEC3AP1 Gene

Sources for APOBEC3AP1 Gene

Back to Top

Content