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Aliases for APCDD1L-AS1 Gene

Subcategory (RNA class) for APCDD1L-AS1 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for APCDD1L-AS1 Gene

  • APCDD1L Antisense RNA 1 (Head To Head) 2 3
  • APCDD1L Antisense RNA 1 (Non-Protein Coding) 2
  • APCDD1L Antisense RNA 1 2

External Ids for APCDD1L-AS1 Gene

ORGUL Members for APCDD1L-AS1 Gene

Summaries for APCDD1L-AS1 Gene

GeneCards Summary for APCDD1L-AS1 Gene

APCDD1L-AS1 (APCDD1L Antisense RNA 1 (Head To Head)) is a RNA Gene, and belongs to lncRNA RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for APCDD1L-AS1 Gene

Genomics for APCDD1L-AS1 Gene

Genomic Location for APCDD1L-AS1 Gene

Start:
58,515,379 bp from pter
End:
58,619,892 bp from pter
Size:
104,514 bases
Orientation:
Plus strand

Genomic View for APCDD1L-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for APCDD1L-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for APCDD1L-AS1 Gene

No data available for Regulatory Elements for APCDD1L-AS1 Gene

Proteins for APCDD1L-AS1 Gene

Post-translational modifications for APCDD1L-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for APCDD1L-AS1 Gene

Domains for APCDD1L-AS1 Gene

Gene Families for APCDD1L-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs
genes like me logo Genes that share domains with APCDD1L-AS1: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for APCDD1L-AS1 Gene

Function for APCDD1L-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for APCDD1L-AS1 Gene

Localization for APCDD1L-AS1 Gene

No data available for Gene Ontology (GO) - Cellular Components for APCDD1L-AS1 Gene

Pathways for APCDD1L-AS1 Gene

SuperPathways for APCDD1L-AS1 Gene

No Data Available

Interacting Proteins for APCDD1L-AS1 Gene

Gene Ontology (GO) - Biological Process for APCDD1L-AS1 Gene

None

No data available for Pathways by source for APCDD1L-AS1 Gene

Transcripts for APCDD1L-AS1 Gene

mRNA/cDNA for APCDD1L-AS1 Gene

(4) Additional mRNA sequences :
(10) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for APCDD1L-AS1 Gene

APCDD1L antisense RNA 1 (head to head):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for APCDD1L-AS1 Gene

No ASD Table

Relevant External Links for APCDD1L-AS1 Gene

GeneLoc Exon Structure for
APCDD1L-AS1
ECgene alternative splicing isoforms for
APCDD1L-AS1

Expression for APCDD1L-AS1 Gene

mRNA expression in normal human tissues for APCDD1L-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for APCDD1L-AS1 Gene

This gene is overexpressed in Minor Salivary Gland (10.0), Breast - Mammary Tissue (5.4), and Kidney - Cortex (4.8).

SOURCE GeneReport for Unigene cluster for APCDD1L-AS1 Gene Hs.685214

genes like me logo Genes that share expressions with APCDD1L-AS1: view

Orthologs for APCDD1L-AS1 Gene

Evolution for APCDD1L-AS1 Gene

ENSEMBL:
Gene Tree for APCDD1L-AS1 (if available)
TreeFam:
Gene Tree for APCDD1L-AS1 (if available)

No data available for Orthologs for APCDD1L-AS1 Gene

Paralogs for APCDD1L-AS1 Gene

No data available for Paralogs for APCDD1L-AS1 Gene

Variants for APCDD1L-AS1 Gene

Sequence variations from dbSNP and Humsavar for APCDD1L-AS1 Gene

SNP ID Clin Chr 20 pos Sequence Context AA Info Type MAF
rs127430 -- 58,589,799(+) AGCTA(A/G)CTGTA intron-variant
rs127431 -- 58,608,925(+) TGTGG(C/T)GGGGG intron-variant
rs127432 -- 58,609,221(+) CGAAA(C/T)CACCT intron-variant
rs127433 -- 58,609,232(+) GCTTC(C/T)AGGAG intron-variant
rs218447 -- 58,585,594(+) TGCTG(C/T)GGCCG intron-variant

Relevant External Links for APCDD1L-AS1 Gene

HapMap Linkage Disequilibrium report
APCDD1L-AS1

No data available for Structural Variations from Database of Genomic Variants (DGV) for APCDD1L-AS1 Gene

Disorders for APCDD1L-AS1 Gene

No disorders were found for APCDD1L-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for APCDD1L-AS1 Gene

Publications for APCDD1L-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  2. Longitudinal genome-wide association of cardiovascular disease risk factors in the Bogalusa heart study. (PMID: 20838585) Smith E.N. … Murray S.S. (PLoS Genet. 2010) 3
  3. Discovery of genetic biomarkers contributing to variation in drug response of cytidine analogues using human lymphoblastoid cell lines. (PMID: 24483146) Li L. … Wang L. (BMC Genomics 2014) 3

Products for APCDD1L-AS1 Gene

Sources for APCDD1L-AS1 Gene

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