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Aliases for AP4B1-AS1 Gene

Subcategory (RNA class) for AP4B1-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for AP4B1-AS1 Gene

  • AP4B1 Antisense RNA 1 2 3
  • AP4B1 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for AP4B1-AS1 Gene

ORGUL Members for AP4B1-AS1 Gene

Previous GeneCards Identifiers for AP4B1-AS1 Gene

  • GC01P114400

Summaries for AP4B1-AS1 Gene

GeneCards Summary for AP4B1-AS1 Gene

AP4B1-AS1 (AP4B1 Antisense RNA 1) is an RNA Gene, and is affiliated with the antisense RNA class.

fRNAdb sequence ontologies for AP4B1-AS1 Gene

  • antisense_RNA: Antisense RNA is RNA that is transcribed from the coding, rather than the template, strand of DNA. It is therefore complementary to mRNA.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for AP4B1-AS1 Gene

Genomics for AP4B1-AS1 Gene

Genomic Location for AP4B1-AS1 Gene

Start:
113,856,635 bp from pter
End:
113,901,237 bp from pter
Size:
44,603 bases
Orientation:
Plus strand

Genomic View for AP4B1-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for AP4B1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for AP4B1-AS1 Gene

No data available for Regulatory Elements for AP4B1-AS1 Gene

Proteins for AP4B1-AS1 Gene

Post-translational modifications for AP4B1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for AP4B1-AS1 Gene

Domains for AP4B1-AS1 Gene

Gene Families for AP4B1-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with AP4B1-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for AP4B1-AS1 Gene

Function for AP4B1-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for AP4B1-AS1 Gene

Localization for AP4B1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for AP4B1-AS1 Gene

Pathways for AP4B1-AS1 Gene

SuperPathways for AP4B1-AS1 Gene

No Data Available

Interacting Proteins for AP4B1-AS1 Gene

Gene Ontology (GO) - Biological Process for AP4B1-AS1 Gene

None

No data available for Pathways by source for AP4B1-AS1 Gene

Transcripts for AP4B1-AS1 Gene

mRNA/cDNA for AP4B1-AS1 Gene

(2) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for AP4B1-AS1 Gene

AP4B1 antisense RNA 1:
Representative Sequences:

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate AP4B1-AS1
    • Block miRNA regulation of AP4B1-AS1 using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for AP4B1-AS1

    Primer Products

    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for AP4B1-AS1 Gene

    No ASD Table

    Relevant External Links for AP4B1-AS1 Gene

    GeneLoc Exon Structure for
    AP4B1-AS1
    ECgene alternative splicing isoforms for
    AP4B1-AS1

    Expression for AP4B1-AS1 Gene

    mRNA expression in normal human tissues for AP4B1-AS1 Gene

    SOURCE GeneReport for Unigene cluster for AP4B1-AS1 Gene Hs.664669

    genes like me logo Genes that share expressions with AP4B1-AS1: view

    In Situ Assay Products

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for AP4B1-AS1 Gene

    Orthologs for AP4B1-AS1 Gene

    Evolution for AP4B1-AS1 Gene

    ENSEMBL:
    Gene Tree for AP4B1-AS1 (if available)
    TreeFam:
    Gene Tree for AP4B1-AS1 (if available)

    No data available for Orthologs for AP4B1-AS1 Gene

    Paralogs for AP4B1-AS1 Gene

    No data available for Paralogs for AP4B1-AS1 Gene

    Variants for AP4B1-AS1 Gene

    Sequence variations from dbSNP and Humsavar for AP4B1-AS1 Gene

    SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
    rs1217385 -- 113,875,583(-) CAGAG(G/T)TAGGG intron-variant
    rs1217391 -- 113,891,554(-) AAAAA(A/G)GCGTA intron-variant
    rs1217392 -- 113,891,348(+) TGTAT(G/T)CCTCT intron-variant
    rs1217393 -- 113,891,324(+) CAAAA(A/G)CAACA intron-variant
    rs1217394 -- 113,891,037(+) CATAC(A/G)TAACA intron-variant

    Relevant External Links for AP4B1-AS1 Gene

    HapMap Linkage Disequilibrium report
    AP4B1-AS1

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for AP4B1-AS1 Gene

    Disorders for AP4B1-AS1 Gene

    No disorders were found for AP4B1-AS1 Gene.

    No data available for UniProtKB/Swiss-Prot for AP4B1-AS1 Gene

    Publications for AP4B1-AS1 Gene

    1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
    2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3

    Products for AP4B1-AS1 Gene

    • QIAGEN qRT-PCR Assays for microRNAs that regulate AP4B1-AS1
      • QuantiTect SYBR Green Assays in human,mouse,rat
      • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
      • QuantiFast Probe-based Assays in human,mouse,rat
      • Predesigned siRNA for gene silencing in human,mouse,rat for AP4B1-AS1
      • Block miRNA regulation of AP4B1-AS1 using miScript Target Protectors

      Sources for AP4B1-AS1 Gene

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