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Aliases for AOC4P Gene

Aliases for AOC4P Gene

  • Amine Oxidase, Copper Containing 4, Pseudogene 2 3
  • Amine Oxidase, Copper Containing 3 (Vascular Adhesion Protein 1) Pseudogene 3
  • Amine Oxidase Pseudogene 3
  • AOC4 3

External Ids for AOC4P Gene

Previous GeneCards Identifiers for AOC4P Gene

  • GC17P041017

Summaries for AOC4P Gene

GeneCards Summary for AOC4P Gene

AOC4P (Amine Oxidase, Copper Containing 4, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for AOC4P Gene

Genomics for AOC4P Gene

Genomic Location for AOC4P Gene

Chromosome:
17
Start:
42,865,922 bp from pter
End:
42,874,369 bp from pter
Size:
8,448 bases
Orientation:
Plus strand

Genomic View for AOC4P Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for AOC4P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for AOC4P Gene

No data available for Regulatory Elements for AOC4P Gene

Proteins for AOC4P Gene

Post-translational modifications for AOC4P Gene

No Post-translational modifications

No data available for DME Specific Peptides for AOC4P Gene

Domains & Families for AOC4P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for AOC4P Gene

Function for AOC4P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for AOC4P Gene

Localization for AOC4P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for AOC4P Gene

Pathways & Interactions for AOC4P Gene

SuperPathways for AOC4P Gene

No Data Available

Interacting Proteins for AOC4P Gene

Gene Ontology (GO) - Biological Process for AOC4P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for AOC4P Gene

Drugs & Compounds for AOC4P Gene

No Compound Related Data Available

Transcripts for AOC4P Gene

Alternative Splicing Database (ASD) splice patterns (SP) for AOC4P Gene

No ASD Table

Relevant External Links for AOC4P Gene

GeneLoc Exon Structure for
AOC4P
ECgene alternative splicing isoforms for
AOC4P

Expression for AOC4P Gene

mRNA expression in normal human tissues for AOC4P Gene

mRNA differential expression in normal tissues according to GTEx for AOC4P Gene

This gene is overexpressed in Liver (x8.1), Artery - Tibial (x7.6), and Adipose - Subcutaneous (x5.1).
genes like me logo Genes that share expression patterns with AOC4P: view

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for AOC4P Gene

Orthologs for AOC4P Gene

Evolution for AOC4P Gene

ENSEMBL:
Gene Tree for AOC4P (if available)
TreeFam:
Gene Tree for AOC4P (if available)

No data available for Orthologs for AOC4P Gene

Paralogs for AOC4P Gene

No data available for Paralogs for AOC4P Gene

Variants for AOC4P Gene

Sequence variations from dbSNP and Humsavar for AOC4P Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type MAF
rs418834 -- 42,868,217(-) AACTG(C/T)AGAGG nc-transcript-variant
rs7214297 -- 42,867,777(+) ATCAC(C/T)GACGC nc-transcript-variant
rs11871375 -- 42,869,006(+) TGAGG(C/G)GGGTG nc-transcript-variant
rs28648368 -- 42,867,828(+) TCTTC(A/G/T)ACAGA nc-transcript-variant
rs28661937 -- 42,867,508(+) CCAGC(A/G)GCTGG nc-transcript-variant

Relevant External Links for AOC4P Gene

HapMap Linkage Disequilibrium report
AOC4P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for AOC4P Gene

Disorders for AOC4P Gene

Relevant External Links for AOC4P

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
AOC4P
genes like me logo Genes that share disorders with AOC4P: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for AOC4P Gene

Publications for AOC4P Gene

  1. Structural organization of mammalian copper-containing amine oxidase genes. (PMID: 20013028) Schwelberger H.G. (Inflamm. Res. 2010) 2 67
  2. Long non-coding RNA AOC4P suppresses hepatocellular carcinoma metastasis by enhancing vimentin degradation and inhibiting epithelial-mesenchymal transition. (PMID: 26160837) Wang T.H. … Chen T.C. (Oncotarget 2015) 67
  3. The origin of mammalian plasma amine oxidases. (PMID: 17385066) Schwelberger H.G. (J Neural Transm 2007) 67
  4. Characterization of AOC2 gene encoding a copper-binding amine oxidase expressed specifically in retina. (PMID: 14585497) Zhang Q. … Iwata T. (Gene 2003) 67
  5. cDNA cloning of two splice variants of a human copper-containing monoamine oxidase pseudogene containing a dimeric Alu repeat sequence. (PMID: 9767118) Cronin C.N. … McIntire W.S. (Gene 1998) 67

Products for AOC4P Gene

Sources for AOC4P Gene

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