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Aliases for ANXA2P3 Gene

Aliases for ANXA2P3 Gene

  • Annexin A2 Pseudogene 3 2 3 5
  • Annexin II (Lipocortin II) Pseudogene 3 3
  • ANX2L3 3
  • ANX2P3 3
  • LPC2C 3
  • LIP2 3

External Ids for ANXA2P3 Gene

Previous HGNC Symbols for ANXA2P3 Gene

  • ANX2P3
  • ANX2L3
  • LPC2C

Previous GeneCards Identifiers for ANXA2P3 Gene

  • GC10U990004
  • GC10P065929
  • GC10P066255
  • GC10P066586
  • GC10P060577

Summaries for ANXA2P3 Gene

GeneCards Summary for ANXA2P3 Gene

ANXA2P3 (Annexin A2 Pseudogene 3) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ANXA2P3 Gene

Genomics for ANXA2P3 Gene

Regulatory Elements for ANXA2P3 Gene

Enhancers for ANXA2P3 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around ANXA2P3 on UCSC Golden Path with GeneCards custom track

Genomic Location for ANXA2P3 Gene

Chromosome:
10
Start:
64,825,528 bp from pter
End:
64,826,877 bp from pter
Size:
1,350 bases
Orientation:
Plus strand

Genomic View for ANXA2P3 Gene

Genes around ANXA2P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ANXA2P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ANXA2P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ANXA2P3 Gene

Proteins for ANXA2P3 Gene

Post-translational modifications for ANXA2P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ANXA2P3 Gene

Domains & Families for ANXA2P3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ANXA2P3 Gene

Function for ANXA2P3 Gene

Molecular function for ANXA2P3 Gene

GENATLAS Biochemistry:
annexin A2,pseudogene 3

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ANXA2P3 Gene

Localization for ANXA2P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ANXA2P3 Gene

Pathways & Interactions for ANXA2P3 Gene

SuperPathways for ANXA2P3 Gene

No Data Available

Interacting Proteins for ANXA2P3 Gene

Gene Ontology (GO) - Biological Process for ANXA2P3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ANXA2P3 Gene

Drugs & Compounds for ANXA2P3 Gene

No Compound Related Data Available

Transcripts for ANXA2P3 Gene

mRNA/cDNA for ANXA2P3 Gene

(2) Additional mRNA sequences :
(5) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ANXA2P3 Gene

Annexin A2 pseudogene 3:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ANXA2P3 Gene

No ASD Table

Relevant External Links for ANXA2P3 Gene

GeneLoc Exon Structure for
ANXA2P3
ECgene alternative splicing isoforms for
ANXA2P3

Expression for ANXA2P3 Gene

mRNA expression in normal human tissues for ANXA2P3 Gene

mRNA differential expression in normal tissues according to GTEx for ANXA2P3 Gene

This gene is overexpressed in Brain - Cortex (x9.0), Brain - Cerebellum (x8.5), Brain - Cerebellar Hemisphere (x8.0), Brain - Frontal Cortex (BA9) (x7.8), and Brain - Nucleus accumbens (basal ganglia) (x4.3).

SOURCE GeneReport for Unigene cluster for ANXA2P3 Gene Hs.591361

genes like me logo Genes that share expression patterns with ANXA2P3: view

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for ANXA2P3 Gene

Orthologs for ANXA2P3 Gene

Evolution for ANXA2P3 Gene

ENSEMBL:
Gene Tree for ANXA2P3 (if available)
TreeFam:
Gene Tree for ANXA2P3 (if available)

No data available for Orthologs for ANXA2P3 Gene

Paralogs for ANXA2P3 Gene

No data available for Paralogs for ANXA2P3 Gene

Variants for ANXA2P3 Gene

Sequence variations from dbSNP and Humsavar for ANXA2P3 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type
rs4088923 -- 64,825,241(-) cacca(C/T)gttgg upstream-variant-2KB
rs4117597 -- 64,826,833(+) CCTCC(C/T)GTGTA nc-transcript-variant
rs990828 -- 64,823,981(-) TTCAT(A/G)GTAAG upstream-variant-2KB
rs7898508 -- 64,825,756(+) GACCA(A/G)CAGCA nc-transcript-variant
rs1227232 -- 64,824,229(+) ACACC(C/T)CTATA upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for ANXA2P3 Gene

Variant ID Type Subtype PubMed ID
nsv895576 CNV Gain 21882294
nsv895577 CNV Gain 21882294
nsv895578 CNV Loss 21882294

Relevant External Links for ANXA2P3 Gene

HapMap Linkage Disequilibrium report
ANXA2P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ANXA2P3 Gene

Disorders for ANXA2P3 Gene

Relevant External Links for ANXA2P3

Genetic Association Database (GAD)
ANXA2P3
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ANXA2P3

No disorders were found for ANXA2P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ANXA2P3 Gene

Publications for ANXA2P3 Gene

  1. Characterization of the human lipocortin-2-encoding multigene family: its structure suggests the existence of a short amino acid unit undergoing duplication. (PMID: 2174397) Spano F. … Melli M. (Gene 1990) 2 3 67
  2. Genome-wide association of lipid-lowering response to statins in combined study populations. (PMID: 20339536) Barber M.J. … Krauss R.M. (PLoS ONE 2010) 3

Products for ANXA2P3 Gene

Sources for ANXA2P3 Gene

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