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ANXA10 Gene

protein-coding   GIFtS: 51
GCID: GC04P169013

Annexin A10

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(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, 10fRNAdb, 12H-InvDB, 13NCBI, 14NONCODE, and/or 15RNAdb)
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Aliases
Annexin A101 2     annexin-142
ANX142 3     Annexin-103
Annexin 142     Annexin-143
annexin-102     

External Ids:    HGNC: 5341   Entrez Gene: 111992   Ensembl: ENSG000001095117   OMIM: 6080085   UniProtKB: Q9UJ723   

Export aliases for ANXA10 gene to outside databases

Previous GC identifers: GC04P169783 GC04P169435 GC04P169598 GC04P169709 GC04P169388 GC04P169250 GC04P164764


(According to Entrez Gene, GeneCards, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
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Entrez Gene summary for ANXA10 Gene:
This gene encodes a member of the annexin family. Members of this calcium-dependent phospholipid-binding protein
family play a role in the regulation of cellular growth and in signal transduction pathways. The function of this
gene has not yet been determined. (provided by RefSeq, Jul 2008)

GeneCards Summary for ANXA10 Gene:
ANXA10 (annexin A10) is a protein-coding gene. GO annotations related to this gene include calcium-dependent phospholipid binding and calcium ion binding. An important paralog of this gene is ANXA3.




(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 75), Regulatory elements and Epigenetics data according to QIAGEN, and/or SwitchGear Genomics)
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RefSeq DNA sequence at NCBI GenBank:
NC_000004.11  NT_016354.20  NC_018915.2  
Regulatory elements:
   Regulatory transcription factor binding sites in the ANXA10 gene promoter:
         Oct-B1   oct-B3   oct-B2   GATA-3   Cdc5   FAC1   Nkx6-1   FOXJ2 (long isoform)   HFH-1   FOXJ2   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidANXA10 promoter sequence
   Search Chromatin IP Primers for ANXA10

Epigenetics:
DNA Methylation CpG Assay Predesigned for Pyrosequencing in human, mouse, rat ANXA10


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 4q33   Ensembl cytogenetic band:  4q32.3   HGNC cytogenetic band: 4q32.3

ANXA10 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
ANXA10 gene location

GeneLoc information about chromosome 4         GeneLoc Exon Structure

GeneLoc location for GC04P169013:  view genomic region     (about GC identifiers)

Start:
169,013,666 bp from pter      End:
169,108,893 bp from pter
Size:
95,228 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, 2neXtProt, Ensembl, and/or Reactome, Modification sites according to PhosphoSitePlus, Specific Peptides from DME, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, Cloud-Clone Corp., eBioscience, and/or antibodies-online,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, Cloud-Clone Corp., eBioscience, and/or antibodies-online, Antibodies by EMD Millipore, R&D Systems, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, Cloud-Clone Corp, antibodies-online, and/or others.)
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UniProtKB/Swiss-Prot: ANX10_HUMAN, Q9UJ72 (See protein sequence)
Recommended Name: Annexin A10  
Size: 324 amino acids; 37278 Da
Secondary accessions: Q96IQ5 Q9UJV4

Explore the universe of human proteins at neXtProt for ANXA10: NX_Q9UJ72

Explore proteomics data for ANXA10 at MOPED

Post-translational modifications: 

  • Modification sites at neXtProt
  • Modification sites at PhosphoSitePlus

  • See ANXA10 Protein Expression from SPIRE MOPED, PaxDB, and MaxQB

    REFSEQ proteins: NP_009124.2  
    ENSEMBL proteins: 
     ENSP00000352248  

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    (According to HGNC, IUPHAR, InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
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    HGNC Gene Families:
    ANXA: Annexins

    4 InterPro protein domains:
     IPR008156 AnnexinX
     IPR018502 Annexin_repeat
     IPR001464 Annexin
     IPR018252 Annexin_repeat_CS

    Graphical View of Domain Structure for InterPro Entry Q9UJ72

    ProtoNet protein and cluster: Q9UJ72

    1 Blocks protein domain: IPB001464 Annexin

    UniProtKB/Swiss-Prot: ANX10_HUMAN, Q9UJ72
    Similarity: Belongs to the annexin family
    Similarity: Contains 4 annexin repeats


    Find genes that share domains with ANXA10           About GenesLikeMe


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, genOway,
    transcription factor targeting from QIAGEN and/or HOMER, miRNA Gene Targets from miRTarBase, shRNA from OriGene, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, SwitchGear Genomics, Gene Editing from DNA2.0, Clones from OriGene, GenScript, Sino Biological, DNA2.0, Vector BioLabs and/or Addgene, Cell Lines from GenScript, ESI BIO, In Situ Hybridization Assays from Advanced Cell Diagnostics, Flow cytometry from eBioscience, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene.)
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    Molecular Function:
         Genatlas biochemistry entry for ANXA10:
    annexin A10,progenitor of annexin A6 octad formation via chromosome duplication during early chordate evolution

         Gene Ontology (GO): 2 molecular function terms:    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005509calcium ion binding IEA--
    GO:0005544calcium-dependent phospholipid binding IEA--
         
    Find genes that share ontologies with ANXA10           About GenesLikeMe


    Phenotypes:
         1 GenomeRNAi human phenotype for ANXA10:
     Increased gamma-H2AX phosphory 

    Animal Models:
       genOway: Develop your customized and physiologically relevant rodent model for ANXA10

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    (According to UniProtKB, COMPARTMENTS Subcellular localization database, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene.)
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    Subcellular locations from COMPARTMENTS: 

    CompartmentConfidence
    cytosol3
    mitochondrion2
    nucleus2
    extracellular1
    golgi apparatus1

    Gene Ontology (GO): 1 cellular component term:    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005739mitochondrion IEA--

    Find genes that share ontologies with ANXA10           About GenesLikeMe


    (SuperPaths according to PathCards, Pathways according to R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Sino Biological, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to QIAGEN, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene).
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        Custom Pathway & Disease-focused RT2 Profiler PCR Arrays for ANXA10
    Interactions:

        Search GeneGlobe Interaction Network for ANXA10

    STRING Interaction Network Preview (showing 1 interactants - click image to see more details)

    2 Interacting proteins for ANXA10 (Q9UJ723 ENSP000003522484) via UniProtKB, MINT, STRING, and/or I2D
    InteractantInteraction Details
    GeneCardExternal ID(s)
    EDC3Q96F863I2D: score=1 
    UBCENSP000003448184STRING: ENSP00000344818
    About this table

    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience, ApexBio, HMDB, BitterDB, and/or Novoseek, Ligands according to IUPHAR, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB)
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    Browse Small Molecules at EMD Millipore
       Browse drugs & compounds from Enzo Life Sciences
      Browse compounds at ApexBio 

    Browse Tocris compounds for ANXA10 (ANX10)



    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 236 Homo sapiens; Apr 25 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN, SwitchGear Genomics,
    Tagged/untagged cDNA clones from OriGene, GenScript, DNA2.0, Vector BioLabs, and/or Addgene, Primers from OriGene, and/or QIAGEN, Flow cytometry from eBioscience )
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    REFSEQ mRNAs for ANXA10 gene: 
    NM_007193.4  

    Unigene Cluster for ANXA10:

    Annexin A10
    Hs.188401  [show with all ESTs]
    Unigene Representative Sequence: NM_007193
    3 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000359299(uc003irm.3) ENST00000507278(uc003irn.3) ENST00000503003

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      QuantiTect SYBR Green Assays in human, mouse, rat ANXA10
      QuantiFast Probe-based Assays in human, mouse, rat ANXA10

    Additional mRNA sequence: 

    AF196478.1 AJ238979.1 AY626137.1 BC007320.2 

    3 DOTS entries:

    DT.75106697  DT.100638774  DT.95266257 

    Selected AceView cDNA sequences (see all 64):

    BC007320 BM741409 BM766503 AI913045 AY626137 CK823168 BM770895 BM126165 
    CK823169 NM_007193 BM126461 CB163976 BQ101189 BQ100882 BM756894 BM766845 
    BM770653 AF196478 BG489720 BE789806 CB163193 BM765316 BU183283 BQ084288 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, Protein expression images according to data from SPIRE 1MOPED, 2PaxDb, and 3MaxQB, plus additional links to SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from QIAGEN, Primers from OriGene, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
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    ANXA10 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS <intensity>2/3
    CGAP TAG: --
    ANXA10 Expression
    About this image


    ANXA10 expression in embryonic tissues and stem cells    About this table
    Data from LifeMap, the Embryonic Development and Stem Cells Database
     selected tissues (see all 5) fully expand
     
     Neural Crest (Gastrulation Derivatives)
             PureStem 4D20.8, NCr-fac Progenitor
     
     Ovary (Reproductive System)
             Oviduct
     
     Adipose (Muscoskeletal System)
             Interscapular Brown Adipose Depot
     
     Liver (Hepatobiliary System)
     
     Stomach (Gastrointestinal Tract)
    ANXA10 Protein expression data from MOPED1, PaxDb2 and MaxQB3    About this image

    ANXA10 Protein Expression

    SOURCE GeneReport for Unigene cluster: Hs.188401
        Custom PCR Arrays for ANXA10
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    In Situ
    Assay Products:
     

     
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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
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    This gene was present in the common ancestor of animals.

    Orthologs for ANXA10 gene from Selected species (see all 12)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Anxa101 , 5 annexin A101, 5 87.45(n)1
    88.89(a)1
      8 (31.55 cM)5
    263591  NM_001136089.21  NP_001129561.11 
     620575215 
    chicken
    (Gallus gallus)
    Aves ANXA101 annexin A10 79.42(n)
    82.1(a)
      770326  XM_001233661.3  XP_001233662.2 
    tropical clawed frog
    (Xenopus tropicalis)
    Amphibia anxa101 annexin A10 74.59(n)
    76.85(a)
      100125180  NM_001103066.1  NP_001096536.1 
    zebrafish
    (Danio rerio)
    Actinopterygii anxa136
    annexin A13
    37(a)
    many ↔ many
    24(6443802-6459153) ENSDARG00000013976
    worm
    (Caenorhabditis elegans)
    Secernentea nex-16
    nex-36
    Protein NEX-3 (nex-3) mRNA, complete cds
    35(a)
    30(a)
    many ↔ many
    many ↔ many
    III(5225621-5226804) WBGene00003588
    III(4442081-4444239) WBGene00003590


    ENSEMBL Gene Tree for ANXA10 (if available)
    TreeFam Gene Tree for ANXA10 (if available)

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
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    Paralogs for ANXA10 gene
    ANXA32  ANXA62  ANXA52  ANXA12  ANXA92  ANXA22  ANXA72  ANXA82  
    ANXA112  ANXA8L22  ANXA8L12  ANXA42  ANXA132  
    14 SIMAP similar genes for ANXA10 using alignment to 1 protein entry:     ANX10_HUMAN:
    ANXA3    ANXA5    ANXA11    ANXA6    ANXA8L1    ANXA4
    ANXA8    ANXA8L2    ANXA7    ANXA13    ANXA1    ANXA2P2
    ANXA9    ANXA2

    Find genes that share paralogs with ANXA10           About GenesLikeMe



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, 4UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD), the Human Cytochrome P450 Allele Nomenclature Database, and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers, Cancer Mutation PCR Arrays and Assays, and Copy Number PCR Arrays from QIAGEN)
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    Selected SNPs for ANXA10 (see all 1778)    About this table                                 

    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 4 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs131100971,2
    H--169011689(+) TAAGAA/CTTAAT 1 -- us2k1 tfbs34Minor allele frequency- C:0.00NS EA 390
    rs68152461,2
    C,F,H--169011822(+) ACAACC/GAAACA 1 -- us2k1 tfbs310Minor allele frequency- G:0.14NS EA NA WA CSA 530
    rs1137517051,2
    C,F--169011869(+) AAAATC/AGAATT 1 -- us2k12Minor allele frequency- A:0.50CSA 4
    rs779666971,2
    F--169011893(+) AACTAC/ACATCT 1 -- us2k11Minor allele frequency- A:0.12WA 118
    rs777686211,2
    C,F--169011911(+) TAGTTT/ATCAAG 1 -- us2k11Minor allele frequency- A:0.04WA 118
    rs1156443691,2
    C,F--169012216(+) AAGACC/TTGCAA 1 -- us2k11Minor allele frequency- T:0.03NA 120
    rs1931369171,2
    --169012289(+) AAACAA/GTTTTA 1 -- us2k10--------
    rs1483474471,2
    C--169012333(+) TCCTAC/TAGTTT 1 -- us2k10--------
    rs1415387771,2
    C--169012351(+) TATATC/TTATTA 1 -- us2k10--------
    rs1856169101,2
    --169012382(+) GTCTAA/CATATA 1 -- us2k10--------

    HapMap Linkage Disequilibrium report for ANXA10 (169013666 - 169108893 bp)

    Structural Variations
         Database of Genomic Variants (DGV) Selected variations for ANXA10 (see all 13):    About this table    
    Variant IDTypeSubtypePubMed ID
    dgv5823n71CNV Loss21882294
    nsv293790CNV Loss16902084
    nsv881050CNV Loss21882294
    dgv194e55CNV Loss17911159
    nsv521908CNV Loss19592680
    nsv881391CNV Loss21882294
    nsv820236CNV Gain19587683
    nsv881291CNV Gain21882294
    nsv830146CNV Gain17160897
    nsv428455CNV Gain18775914

    Site Specific Mutation Identification with PCR Assays
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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
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    OMIM gene information: 608008    OMIM disorders: --


    Find genes that share disorders with ANXA10           About GenesLikeMe

    2 Novoseek inferred disease relationships for ANXA10 gene    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    hepatocellular carcinoma 24.6 2 12000734 (2)
    tumors 1.51 3 12000734 (1), 15754002 (1), 17266044 (1)


    Export disorders for ANXA10 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
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    PubMed articles for ANXA10 gene, integrated from 10 sources (see all 22):
    (articles sorted by number of sources associating them with ANXA10)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Novel human and mouse annexin A10 are linked to the genome duplications during early chordate evolution. (PubMed id 10458909)1, 2, 3, 9 Morgan R.O.... Fernandez M.-P. (Genomics 1999)
    2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S.... Malek J. (Genome Res. 2004)
    3. Down-regulation of annexin A10 in hepatocellular carcinoma is associated with vascular invasion, early recurrence, and poor prognosis in synergy with p53 mutation. (PubMed id 12000734)1, 9 Liu S.H....Hsu H.C. (Am. J. Pathol. 2002)
    4. Reduced expression and homozygous deletion of annexin A10 in gastric carcinoma. (PubMed id 19582876)1, 9 Kim J....Kim W.H. (Int. J. Cancer 2009)
    5. The tumor suppressor annexin A10 is a novel component of nuclear paraspeckles. (PubMed id 23715859)1 Quiskamp N....Rescher U. (Cell. Mol. Life Sci. 2014)
    6. Bcl2-associated athanogene 3 interactome analysis reveals a new role in modulating proteasome activity. (PubMed id 23824909)1 Chen Y....Ge F. (amp 2013)
    7. Annexin A10 in human oral cancer: biomarker for tumoral growth via G1/S transition by targeting MAPK signaling pathways. (PubMed id 23029062)1 Shimizu T....Uzawa K. (PLoS ONE 2012)
    8. Expression and prognostic significance of gastric-specific annexin A10 in diffuse- and intestinal-type gastric carcinoma. (PubMed id 21175800)1 Lu S.H....Hsu H.C. (J. Gastroenterol. Hepatol. 2011)
    9. Low ANXA10 expression is associated with disease aggressiveness in bladder cancer. (PubMed id 21979422)1 Munksgaard P.P....AgerbA ( 2011)
    10. Systematic and quantitative assessment of the ubiquitin-modified proteome. (PubMed id 21906983)1 Kim W....Gygi S.P. (Mol. Cell 2011)

    (in PubMed, OMIM, and NCBI Bookshelf)
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     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
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    Entrez Gene: 11199 HGNC: 534 AceView: ANXA10 Ensembl:ENSG00000109511 euGenes: HUgn11199
    ECgene: ANXA10 H-InvDB: ANXA10

    (According to HUGE)
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      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL, and/or others, e.g. Wikipedia and GeneReviews, via UniProtKB/Swiss-Prot)
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    NameDescription
    PharmGKB entry for ANXA10 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
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    Patent Information for ANXA10 gene:
    Search GeneIP for patents involving ANXA10

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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    Advanced Cell Diagnostics, Animal models from genOway)
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