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Aliases for ANTXR1 Gene

Aliases for ANTXR1 Gene

  • Anthrax Toxin Receptor 1 2 3
  • TEM8 3 4 6
  • ATR 3 4 6
  • Tumor Endothelial Marker 8 3 4
  • GAPO 3 6
  • Tumor Endothelial Marker 8 Precursor 2
  • Anthrax Toxin Receptor 2
  • 2310008J16Rik 3
  • 2810405N18Rik 3

External Ids for ANTXR1 Gene

Summaries for ANTXR1 Gene

Entrez Gene Summary for ANTXR1 Gene

  • This gene encodes a type I transmembrane protein and is a tumor-specific endothelial marker that has been implicated in colorectal cancer. The encoded protein has been shown to also be a docking protein or receptor for Bacillus anthracis toxin, the causative agent of the disease, anthrax. The binding of the protective antigen (PA) component, of the tripartite anthrax toxin, to this receptor protein mediates delivery of toxin components to the cytosol of cells. Once inside the cell, the other two components of anthrax toxin, edema factor (EF) and lethal factor (LF) disrupt normal cellular processes. Three alternatively spliced variants that encode different protein isoforms have been described. [provided by RefSeq, Oct 2008]

GeneCards Summary for ANTXR1 Gene

ANTXR1 (Anthrax Toxin Receptor 1) is a Protein Coding gene. Diseases associated with ANTXR1 include gapo syndrome and familial capillary hemangioma. Among its related pathways are ERK Signaling and Apoptotic Pathways in Synovial Fibroblasts. GO annotations related to this gene include transmembrane signaling receptor activity and collagen binding. An important paralog of this gene is ANTXR2.

UniProtKB/Swiss-Prot for ANTXR1 Gene

  • Plays a role in cell attachment and migration. Interacts with extracellular matrix proteins and with the actin cytoskeleton. Mediates adhesion of cells to type 1 collagen and gelatin, reorganization of the actin cytoskeleton and promotes cell spreading. Plays a role in the angiogenic response of cultured umbilical vein endothelial cells.

Gene Wiki entry for ANTXR1 Gene

No data available for Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ANTXR1 Gene

Genomics for ANTXR1 Gene

Genomic Location for ANTXR1 Gene

Start:
69,013,144 bp from pter
End:
69,249,327 bp from pter
Size:
236,184 bases
Orientation:
Plus strand

Genomic View for ANTXR1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ANTXR1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ANTXR1 Gene

Regulatory Elements for ANTXR1 Gene

Proteins for ANTXR1 Gene

  • Protein details for ANTXR1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9H6X2-ANTR1_HUMAN
    Recommended name:
    Anthrax toxin receptor 1
    Protein Accession:
    Q9H6X2
    Secondary Accessions:
    • A8K7U8
    • J7K7G4
    • J7KF88
    • Q4ZFV6
    • Q53QD8
    • Q96P02
    • Q9NVP3

    Protein attributes for ANTXR1 Gene

    Size:
    564 amino acids
    Molecular mass:
    62789 Da
    Quaternary structure:
    • Interacts with gelatin and type 1 collagen. Interacts with the actin cytoskeleton. Binds to the protective antigen (PA) of Bacillus anthracis. Binding does not occur in the presence of calcium.
    SequenceCaution:
    • Sequence=BAA91707.1; Type=Miscellaneous discrepancy; Note=Erroneous initiation (Translation N-terminally extended) due to a conflict with the genome, including a frameshift.; Evidence={ECO:0000305}; Sequence=BAB15128.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305};

    Three dimensional structures from OCA and Proteopedia for ANTXR1 Gene

    Alternative splice isoforms for ANTXR1 Gene

neXtProt entry for ANTXR1 Gene

Proteomics data for ANTXR1 Gene at MOPED

Post-translational modifications for ANTXR1 Gene

  • Modification sites at PhosphoSitePlus
  • Ubiquitination at Lys445 and Lys453
  • Glycosylation at Asn166, Asn184, and Asn262

Other Protein References for ANTXR1 Gene

No data available for DME Specific Peptides for ANTXR1 Gene

Domains for ANTXR1 Gene

UniProtKB/Swiss-Prot:

ANTR1_HUMAN
Domain:
  • Binding to PA occurs through the VWA domain:
    • Q9H6X2
  • Contains 1 VWFA domain.:
    • Q9H6X2
Family:
  • Belongs to the ATR family.:
    • Q9H6X2
genes like me logo Genes that share domains with ANTXR1: view

No data available for Gene Families for ANTXR1 Gene

Function for ANTXR1 Gene

Molecular function for ANTXR1 Gene

UniProtKB/Swiss-Prot Function: Plays a role in cell attachment and migration. Interacts with extracellular matrix proteins and with the actin cytoskeleton. Mediates adhesion of cells to type 1 collagen and gelatin, reorganization of the actin cytoskeleton and promotes cell spreading. Plays a role in the angiogenic response of cultured umbilical vein endothelial cells.
UniProtKB/Swiss-Prot Induction: Up-regulated in cultured angiogenic umbilical vein endothelial cells.

Gene Ontology (GO) - Molecular Function for ANTXR1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004872 receptor activity --
GO:0004888 transmembrane signaling receptor activity IDA 16762926
GO:0005515 protein binding IPI 14507921
GO:0005518 collagen binding IDA 16762926
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ANTXR1: view
genes like me logo Genes that share phenotypes with ANTXR1: view

Animal Models for ANTXR1 Gene

MGI Knock Outs for ANTXR1:

miRNA for ANTXR1 Gene

miRTarBase miRNAs that target ANTXR1

No data available for Enzyme Numbers (IUBMB) , Transcription Factor Targeting and HOMER Transcription for ANTXR1 Gene

Localization for ANTXR1 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ANTXR1 Gene

Cell membrane; Single-pass type I membrane protein. Cell projection, lamellipodium membrane; Single-pass type I membrane protein. Cell projection, filopodium membrane; Single-pass type I membrane protein. Note=At the membrane of lamellipodia and at the tip of actin-enriched filopodia. Colocalizes with actin at the base of lamellipodia.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ANTXR1 Gene COMPARTMENTS Subcellular localization image for ANTXR1 gene
Compartment Confidence
plasma membrane 5
cytosol 2
cytoskeleton 1
endoplasmic reticulum 1
extracellular 1
peroxisome 1

Gene Ontology (GO) - Cellular Components for ANTXR1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005886 plasma membrane TAS --
GO:0009986 cell surface IDA 19581412
GO:0010008 endosome membrane TAS --
GO:0016021 integral component of membrane IEA --
GO:0031258 lamellipodium membrane IDA 16762926
genes like me logo Genes that share ontologies with ANTXR1: view

Pathways for ANTXR1 Gene

genes like me logo Genes that share pathways with ANTXR1: view

Gene Ontology (GO) - Biological Process for ANTXR1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007165 signal transduction IDA 16762926
GO:0022414 reproductive process IEA --
GO:0031532 actin cytoskeleton reorganization IDA 16762926
GO:0034446 substrate adhesion-dependent cell spreading IDA 16762926
genes like me logo Genes that share ontologies with ANTXR1: view

Compounds for ANTXR1 Gene

(1) HMDB Compounds for ANTXR1 Gene

Compound Synonyms Cas Number PubMed IDs
Calcium
  • Ca
7440-70-2
genes like me logo Genes that share compounds with ANTXR1: view

Transcripts for ANTXR1 Gene

Unigene Clusters for ANTXR1 Gene

Anthrax toxin receptor 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ANTXR1 Gene

ExUns: 1a · 1b · 1c ^ 2 ^ 3 ^ 4 ^ 5 ^ 6 ^ 7 ^ 8 ^ 9 ^ 10a · 10b ^ 11a · 11b · 11c · 11d ^ 12 ^ 13 ^ 14 ^ 15 ^ 16 ^ 17 ^ 18 ^ 19 ^ 20 ^
SP1: - - - - - - -
SP2: - - - - - -
SP3: - - - - -
SP4: - -
SP5:
SP6: -
SP7:

ExUns: 21
SP1:
SP2:
SP3:
SP4:
SP5:
SP6:
SP7:

Relevant External Links for ANTXR1 Gene

GeneLoc Exon Structure for
ANTXR1
ECgene alternative splicing isoforms for
ANTXR1

Expression for ANTXR1 Gene

mRNA expression in normal human tissues for ANTXR1 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for ANTXR1 Gene

This gene is overexpressed in Artery - Aorta (5.5), Artery - Coronary (5.2), and Artery - Tibial (4.1).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for ANTXR1 Gene

SOURCE GeneReport for Unigene cluster for ANTXR1 Gene Hs.165859

mRNA Expression by UniProt/SwissProt for ANTXR1 Gene

Q9H6X2-ANTR1_HUMAN
Tissue specificity: Detected in umbilical vein endothelial cells (at protein level). Highly expressed in tumor endothelial cells.
genes like me logo Genes that share expressions with ANTXR1: view

Orthologs for ANTXR1 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ANTXR1 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ANTXR1 36
  • 99.53 (n)
  • 99.82 (a)
ANTXR1 37
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia ANTXR1 36
  • 92.54 (n)
  • 97.43 (a)
ANTXR1 37
  • 98 (a)
OneToOne
dog
(Canis familiaris)
Mammalia ANTXR1 36
  • 90.69 (n)
  • 97.4 (a)
ANTXR1 37
  • 99 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Antxr1 36
  • 87.26 (n)
  • 96.58 (a)
Antxr1 16
Antxr1 37
  • 96 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia ANTXR1 37
  • 90 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia ANTXR1 37
  • 85 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Antxr1 36
  • 86.38 (n)
  • 96.98 (a)
chicken
(Gallus gallus)
Aves ANTXR1 36
  • 80.71 (n)
  • 90.02 (a)
ANTXR1 37
  • 87 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia antxr1 36
  • 74.45 (n)
  • 81.29 (a)
zebrafish
(Danio rerio)
Actinopterygii antxr1a 37
  • 69 (a)
OneToMany
antxr1b 37
  • 61 (a)
OneToMany
LOC793153 36
  • 74.07 (n)
  • 79.05 (a)
Species with no ortholog for ANTXR1:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ANTXR1 Gene

ENSEMBL:
Gene Tree for ANTXR1 (if available)
TreeFam:
Gene Tree for ANTXR1 (if available)

Paralogs for ANTXR1 Gene

Paralogs for ANTXR1 Gene

Selected SIMAP similar genes for ANTXR1 Gene using alignment to 4 proteins:

genes like me logo Genes that share paralogs with ANTXR1: view

Variants for ANTXR1 Gene

Sequence variations from dbSNP and Humsavar for ANTXR1 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type MAF
rs1106518 -- 69,101,086(-) AGAGG(C/T)CTTCA intron-variant
rs1127683 -- 69,249,143(+) TTTTT(A/T)AAAAA utr-variant-3-prime
rs1133188 -- 69,229,936(-) CTTAA(A/C)TTTGC intron-variant
rs3890787 -- 69,143,639(-) TGGCC(A/G)GTTTT intron-variant
rs3890788 -- 69,143,575(-) ATCTA(G/T)ATATG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ANTXR1 Gene

Variant ID Type Subtype PubMed ID
nsv521516 CNV Loss 19592680
esv1001025 CNV Deletion 20482838
esv33940 CNV Loss 17666407
nsv2767 CNV Insertion 18451855
nsv528644 CNV Loss 19592680

Relevant External Links for ANTXR1 Gene

HapMap Linkage Disequilibrium report
ANTXR1
Human Gene Mutation Database (HGMD)
ANTXR1

Disorders for ANTXR1 Gene

(2) OMIM Diseases for ANTXR1 Gene (606410)

UniProtKB/Swiss-Prot

ANTR1_HUMAN
  • Hemangioma, capillary infantile (HCI) [MIM:602089]: A condition characterized by dull red, firm, dome-shaped hemangiomas, sharply demarcated from surrounding skin, usually presenting at birth or occurring within the first two or three months of life. They result from highly proliferative, localized growth of capillary endothelium and generally undergo regression and involution without scarring. {ECO:0000269 PubMed:18931684}. Note=Disease susceptibility is associated with variations affecting the gene represented in this entry.
  • GAPO syndrome (GAPO) [MIM:230740]: A disease characterized by growth retardation, alopecia, failure of tooth eruption, and progressive optic atrophy in some patients. {ECO:0000269 PubMed:23602711}. Note=The disease is caused by mutations affecting the gene represented in this entry.

(1) University of Copenhagen DISEASES for ANTXR1 Gene

(3) Novoseek inferred disease relationships for ANTXR1 Gene

Disease -log(P) Hits PubMed IDs
anthrax 90 18
edema 35 1
tumors 11.4 11

Relevant External Links for ANTXR1

Genetic Association Database (GAD)
ANTXR1
Human Genome Epidemiology (HuGE) Navigator
ANTXR1
genes like me logo Genes that share disorders with ANTXR1: view

Publications for ANTXR1 Gene

  1. Human capillary morphogenesis protein 2 functions as an anthrax toxin receptor. (PMID: 12700348) Scobie H.M. … Young J.A.T. (Proc. Natl. Acad. Sci. U.S.A. 2003) 3 4 23
  2. Genes expressed in human tumor endothelium. (PMID: 10947988) St Croix B. … Kinzler K.W. (Science 2000) 2 3 4
  3. Identification of the cellular receptor for anthrax toxin. (PMID: 11700562) Bradley K.A. … Young J.A.T. (Nature 2001) 3 4 23
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  5. Cell surface tumor endothelial markers are conserved in mice and humans. (PMID: 11559528) Carson-Walter E.B. … St Croix B. (Cancer Res. 2001) 2 3

Products for ANTXR1 Gene

Sources for ANTXR1 Gene

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