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Aliases for ANP32A-IT1 Gene

Subcategory (RNA class) for ANP32A-IT1 Gene

lncRNA

Quality Score for this RNA gene is

2

Aliases for ANP32A-IT1 Gene

  • ANP32A Intronic Transcript 1 2 3
  • ANP32A Intronic Transcript 1 (Non-Protein Coding) 2 3
  • Chromosome 15 Open Reading Frame 28 2
  • Non-Protein Coding RNA 321 2
  • NCRNA00321 3
  • HsT18971 3
  • C15orf28 3

External Ids for ANP32A-IT1 Gene

ORGUL Members for ANP32A-IT1 Gene

Previous Symbols for ANP32A-IT1 Gene

  • C15orf28
  • NCRNA00321

Summaries for ANP32A-IT1 Gene

GeneCards Summary for ANP32A-IT1 Gene

ANP32A-IT1 (ANP32A Intronic Transcript 1) is a RNA Gene, and belongs to lncRNA RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ANP32A-IT1 Gene

Genomics for ANP32A-IT1 Gene

Genomic Location for ANP32A-IT1 Gene

Start:
68,803,821 bp from pter
End:
68,807,101 bp from pter
Size:
3,281 bases
Orientation:
Minus strand

Genomic View for ANP32A-IT1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ANP32A-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ANP32A-IT1 Gene

No data available for Regulatory Elements for ANP32A-IT1 Gene

Proteins for ANP32A-IT1 Gene

Post-translational modifications for ANP32A-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ANP32A-IT1 Gene

Domains for ANP32A-IT1 Gene

Gene Families for ANP32A-IT1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs
genes like me logo Genes that share domains with ANP32A-IT1: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for ANP32A-IT1 Gene

Function for ANP32A-IT1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ANP32A-IT1 Gene

Localization for ANP32A-IT1 Gene

No data available for Gene Ontology (GO) - Cellular Components for ANP32A-IT1 Gene

Pathways for ANP32A-IT1 Gene

SuperPathways for ANP32A-IT1 Gene

No Data Available

Interacting Proteins for ANP32A-IT1 Gene

Gene Ontology (GO) - Biological Process for ANP32A-IT1 Gene

None

No data available for Pathways by source for ANP32A-IT1 Gene

Transcripts for ANP32A-IT1 Gene

mRNA/cDNA for ANP32A-IT1 Gene

(2) REFSEQ mRNAs :
(3) Additional mRNA sequences :

Unigene Clusters for ANP32A-IT1 Gene

ANP32A intronic transcript 1 (non-protein coding):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ANP32A-IT1 Gene

No ASD Table

Relevant External Links for ANP32A-IT1 Gene

GeneLoc Exon Structure for
ANP32A-IT1
ECgene alternative splicing isoforms for
ANP32A-IT1

Expression for ANP32A-IT1 Gene

mRNA expression in normal human tissues for ANP32A-IT1 Gene

SOURCE GeneReport for Unigene cluster for ANP32A-IT1 Gene Hs.662150

genes like me logo Genes that share expressions with ANP32A-IT1: view

Orthologs for ANP32A-IT1 Gene

No data available for Orthologs and Evolution for ANP32A-IT1 Gene

Paralogs for ANP32A-IT1 Gene

No data available for Paralogs for ANP32A-IT1 Gene

Variants for ANP32A-IT1 Gene

Sequence variations from dbSNP and Humsavar for ANP32A-IT1 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type MAF
rs528788405 -- 68,804,308(+) TCCAA(-/TGG)GCACA nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for ANP32A-IT1 Gene

Variant ID Type Subtype PubMed ID
nsv833046 CNV Loss 17160897

Relevant External Links for ANP32A-IT1 Gene

HapMap Linkage Disequilibrium report
ANP32A-IT1

Disorders for ANP32A-IT1 Gene

No disorders were found for ANP32A-IT1 Gene.

No data available for UniProtKB/Swiss-Prot for ANP32A-IT1 Gene

Publications for ANP32A-IT1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 2 3
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for ANP32A-IT1 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate ANP32A-IT1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for ANP32A-IT1
    • Block miRNA regulation of ANP32A-IT1 using miScript Target Protectors

    Sources for ANP32A-IT1 Gene

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