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Aliases for ANKUB1 Gene

Aliases for ANKUB1 Gene

  • Ankyrin Repeat And Ubiquitin Domain Containing 1 2 3
  • Ankyrin Repeat And Ubiquitin Domain-Containing 1 3 4
  • C3orf16 3 4
  • Chromosome 3 Open Reading Frame 16 2

External Ids for ANKUB1 Gene

Previous HGNC Symbols for ANKUB1 Gene

  • C3orf16

Previous GeneCards Identifiers for ANKUB1 Gene

  • GC03M149479

Summaries for ANKUB1 Gene

GeneCards Summary for ANKUB1 Gene

ANKUB1 (Ankyrin Repeat And Ubiquitin Domain Containing 1) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ANKUB1 Gene

Genomics for ANKUB1 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for ANKUB1 Gene

149,760,648 bp from pter
149,968,385 bp from pter
207,738 bases
Minus strand

Genomic View for ANKUB1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ANKUB1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ANKUB1 Gene

No data available for Regulatory Elements for ANKUB1 Gene

Proteins for ANKUB1 Gene

  • Protein details for ANKUB1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Protein ANKUB1
    Protein Accession:
    Secondary Accessions:
    • B4E2N8

    Protein attributes for ANKUB1 Gene

    424 amino acids
    Molecular mass:
    47648 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for ANKUB1 Gene


neXtProt entry for ANKUB1 Gene

Proteomics data for ANKUB1 Gene at MOPED

Post-translational modifications for ANKUB1 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ANKUB1 Gene

No data available for DME Specific Peptides for ANKUB1 Gene

Domains & Families for ANKUB1 Gene

Gene Families for ANKUB1 Gene

Protein Domains for ANKUB1 Gene

Suggested Antigen Peptide Sequences for ANKUB1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with ANKUB1: view

No data available for UniProtKB/Swiss-Prot for ANKUB1 Gene

Function for ANKUB1 Gene

Gene Ontology (GO) - Molecular Function for ANKUB1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding --
genes like me logo Genes that share ontologies with ANKUB1: view

miRNA for ANKUB1 Gene

miRTarBase miRNAs that target ANKUB1

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ANKUB1

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , Transcription Factor Targets and HOMER Transcription for ANKUB1 Gene

Localization for ANKUB1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ANKUB1 Gene

Pathways & Interactions for ANKUB1 Gene

SuperPathways for ANKUB1 Gene

No Data Available

Interacting Proteins for ANKUB1 Gene

Gene Ontology (GO) - Biological Process for ANKUB1 Gene


No data available for Pathways by source and SIGNOR curated interactions for ANKUB1 Gene

Drugs & Compounds for ANKUB1 Gene

No Compound Related Data Available

Transcripts for ANKUB1 Gene

mRNA/cDNA for ANKUB1 Gene

(8) REFSEQ mRNAs :
(4) Additional mRNA sequences :
(1) Selected AceView cDNA sequences:
(9) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ANKUB1 Gene

Ankyrin repeat and ubiquitin domain containing 1:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ANKUB1

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ANKUB1 Gene

No ASD Table

Relevant External Links for ANKUB1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for ANKUB1 Gene

mRNA expression in normal human tissues for ANKUB1 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for ANKUB1 Gene

This gene is overexpressed in Cervix - Endocervix (x10.3), Testis (x10.0), and Lung (x4.4).

SOURCE GeneReport for Unigene cluster for ANKUB1 Gene Hs.665988

genes like me logo Genes that share expression patterns with ANKUB1: view

Primer Products

In Situ Assay Products

No data available for Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for ANKUB1 Gene

Orthologs for ANKUB1 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ANKUB1 Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia ANKUB1 35
  • 87.48 (n)
  • 83.79 (a)
  • 83 (a)
(Canis familiaris)
Mammalia ANKUB1 35
  • 88.77 (n)
  • 84.87 (a)
(Mus musculus)
Mammalia Gm410 35
  • 86.32 (n)
  • 86.84 (a)
Gm410 16
Gm410 36
  • 86 (a)
(Pan troglodytes)
Mammalia ANKUB1 35
  • 99.45 (n)
  • 99.08 (a)
  • 99 (a)
(Rattus norvegicus)
Mammalia Ankub1 35
  • 82.1 (n)
  • 78.41 (a)
(Monodelphis domestica)
Mammalia ANKUB1 36
  • 60 (a)
(Ornithorhynchus anatinus)
Mammalia ANKUB1 36
  • 73 (a)
(Anolis carolinensis)
Reptilia ANKUB1 36
  • 57 (a)
tropical clawed frog
(Silurana tropicalis)
Amphibia ankub1 35
  • 59.85 (n)
  • 52.61 (a)
Str.19383 35
Species with no ortholog for ANKUB1:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ANKUB1 Gene

Gene Tree for ANKUB1 (if available)
Gene Tree for ANKUB1 (if available)

Paralogs for ANKUB1 Gene

No data available for Paralogs for ANKUB1 Gene

Variants for ANKUB1 Gene

Sequence variations from dbSNP and Humsavar for ANKUB1 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type MAF
rs541044 -- 149,772,850(+) CACTT(C/T)CCTGT intron-variant
rs563851 -- 149,773,007(+) GACTA(G/T)GAAGC intron-variant
rs564784 -- 149,773,130(+) TTCAG(A/T)TGCCT intron-variant
rs591566 -- 149,792,063(+) ATAAT(G/T)GACTG intron-variant, upstream-variant-2KB
rs609918 -- 149,793,836(+) ATACA(A/C)TCAAT upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for ANKUB1 Gene

Variant ID Type Subtype PubMed ID
nsv877642 CNV Gain 21882294
esv34142 CNV Loss 18971310
nsv829754 CNV Gain 17160897
esv1145264 CNV Insertion 17803354

Variation tolerance for ANKUB1 Gene

Gene Damage Index Score: 4.99; 68.33% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for ANKUB1 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ANKUB1 Gene

Disorders for ANKUB1 Gene

Relevant External Links for ANKUB1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
genes like me logo Genes that share disorders with ANKUB1: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ANKUB1 Gene

Publications for ANKUB1 Gene

  1. The DNA sequence, annotation and analysis of human chromosome 3. (PMID: 16641997) Muzny D.M. … Gibbs R.A. (Nature 2006) 67
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 67
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 67
  4. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo M.F. … Soares M.B. (Genome Res. 1996) 67

Products for ANKUB1 Gene

Sources for ANKUB1 Gene

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