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Aliases for ANKRD62P1-PARP4P3 Gene

Aliases for ANKRD62P1-PARP4P3 Gene

  • ANKRD62P1-PARP4P3 Readthrough, Transcribed Pseudogene 2 3
  • ANKRD62P1-PARP4P3 Readthrough (Non-Protein Coding) 2 3
  • ADP-Ribosyltransferase (NAD+; Poly (ADP-Ribose) Polymerase)-Like 4 3
  • Poly (ADP-Ribose) Polymerase Family, Member 4 Pseudogene 3 3
  • ANKRD62P1-PARP4P3 Readthrough Transcribed Pseudogene 3
  • VWFP1-ANKRD62P1-PARP4P3 3
  • ADPRTL4 3
  • PARP4P3 3

External Ids for ANKRD62P1-PARP4P3 Gene

Summaries for ANKRD62P1-PARP4P3 Gene

GeneCards Summary for ANKRD62P1-PARP4P3 Gene

ANKRD62P1-PARP4P3 (ANKRD62P1-PARP4P3 Readthrough, Transcribed Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ANKRD62P1-PARP4P3 Gene

Genomics for ANKRD62P1-PARP4P3 Gene

Genomic Location for ANKRD62P1-PARP4P3 Gene

Start:
16,653,708 bp from pter
End:
16,675,540 bp from pter
Size:
21,833 bases
Orientation:
Minus strand

Genomic View for ANKRD62P1-PARP4P3 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ANKRD62P1-PARP4P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ANKRD62P1-PARP4P3 Gene

No data available for Regulatory Elements for ANKRD62P1-PARP4P3 Gene

Proteins for ANKRD62P1-PARP4P3 Gene

Post-translational modifications for ANKRD62P1-PARP4P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ANKRD62P1-PARP4P3 Gene

Domains for ANKRD62P1-PARP4P3 Gene

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for ANKRD62P1-PARP4P3 Gene

Function for ANKRD62P1-PARP4P3 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ANKRD62P1-PARP4P3 Gene

Localization for ANKRD62P1-PARP4P3 Gene

No data available for Gene Ontology (GO) - Cellular Components for ANKRD62P1-PARP4P3 Gene

Pathways for ANKRD62P1-PARP4P3 Gene

SuperPathways for ANKRD62P1-PARP4P3 Gene

No Data Available

Interacting Proteins for ANKRD62P1-PARP4P3 Gene

Gene Ontology (GO) - Biological Process for ANKRD62P1-PARP4P3 Gene

None

No data available for Pathways by source for ANKRD62P1-PARP4P3 Gene

Transcripts for ANKRD62P1-PARP4P3 Gene

mRNA/cDNA for ANKRD62P1-PARP4P3 Gene

(1) Additional mRNA sequences :
(1) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ANKRD62P1-PARP4P3 Gene

ANKRD62P1-PARP4P3 readthrough transcribed pseudogene:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ANKRD62P1-PARP4P3 Gene

No ASD Table

Relevant External Links for ANKRD62P1-PARP4P3 Gene

GeneLoc Exon Structure for
ANKRD62P1-PARP4P3
ECgene alternative splicing isoforms for
ANKRD62P1-PARP4P3

Expression for ANKRD62P1-PARP4P3 Gene

mRNA expression in normal human tissues for ANKRD62P1-PARP4P3 Gene

mRNA differential expression in normal tissues according to GTEx for ANKRD62P1-PARP4P3 Gene

This gene is overexpressed in Testis (21.0).

SOURCE GeneReport for Unigene cluster for ANKRD62P1-PARP4P3 Gene Hs.627452

genes like me logo Genes that share expressions with ANKRD62P1-PARP4P3: view

Orthologs for ANKRD62P1-PARP4P3 Gene

Evolution for ANKRD62P1-PARP4P3 Gene

ENSEMBL:
Gene Tree for ANKRD62P1-PARP4P3 (if available)
TreeFam:
Gene Tree for ANKRD62P1-PARP4P3 (if available)

No data available for Orthologs for ANKRD62P1-PARP4P3 Gene

Paralogs for ANKRD62P1-PARP4P3 Gene

No data available for Paralogs for ANKRD62P1-PARP4P3 Gene

Variants for ANKRD62P1-PARP4P3 Gene

Sequence variations from dbSNP and Humsavar for ANKRD62P1-PARP4P3 Gene

SNP ID Clin Chr 22 pos Sequence Context AA Info Type MAF
rs1155352 -- 16,669,786(+) ACACT(C/T)TCTCT intron-variant
rs1892844 -- 16,674,493(+) CATTT(A/G)CCACA intron-variant
rs1986042 -- 16,671,938(+) agaga(C/T)ggggt intron-variant
rs2381085 -- 16,655,450(+) tgcag(G/T)agcac intron-variant
rs2381086 -- 16,660,449(+) AGCAA(C/T)GCAGA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ANKRD62P1-PARP4P3 Gene

Variant ID Type Subtype PubMed ID
dgv172e55 CNV Gain 17911159
dgv1376e1 CNV Complex 17122850
dgv18e196 CNV Duplication 17116639
nsv471178 CNV Gain 18288195
nsv517059 CNV Gain+Loss 19592680
nsv527637 CNV Gain 19592680
dgv539n27 CNV Gain 19166990
dgv540n27 CNV Gain 19166990

Relevant External Links for ANKRD62P1-PARP4P3 Gene

HapMap Linkage Disequilibrium report
ANKRD62P1-PARP4P3

Disorders for ANKRD62P1-PARP4P3 Gene

No disorders were found for ANKRD62P1-PARP4P3 Gene.

No data available for UniProtKB/Swiss-Prot for ANKRD62P1-PARP4P3 Gene

Publications for ANKRD62P1-PARP4P3 Gene

  1. The DNA sequence of human chromosome 22. (PMID: 10591208) Dunham I. … Wright H. (Nature 1999) 3
  2. Decoding the fine-scale structure of a breast cancer genome and transcriptome. (PMID: 16461635) Volik S. … Collins C. (Genome Res. 2006) 3
  3. Polygenic model of DNA repair genetic polymorphisms in human breast cancer risk. (PMID: 18701435) Smith T.R. … Hu J.J. (Carcinogenesis 2008) 3
  4. Genetic variants of XRCC1, APE1, and ADPRT genes and risk of bladder cancer. (PMID: 20218899) Wang M. … Yin C. (DNA Cell Biol. 2010) 3
  5. Comprehensive screen of genetic variation in DNA repair pathway genes and postmenopausal breast cancer risk. (PMID: 20496165) Monsees G.M. … Han J. (Breast Cancer Res. Treat. 2011) 3

Products for ANKRD62P1-PARP4P3 Gene

Sources for ANKRD62P1-PARP4P3 Gene

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