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Aliases for ANKRD62 Gene

Aliases for ANKRD62 Gene

  • Ankyrin Repeat Domain 62 2 3 5
  • DKFZp779B1634 3

External Ids for ANKRD62 Gene

Previous GeneCards Identifiers for ANKRD62 Gene

  • GC18P012091
  • GC18P012093
  • GC18P012094
  • GC18P012149

Summaries for ANKRD62 Gene

GeneCards Summary for ANKRD62 Gene

ANKRD62 (Ankyrin Repeat Domain 62) is a Protein Coding gene. An important paralog of this gene is ANKRD18A.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ANKRD62 Gene

Genomics for ANKRD62 Gene

Regulatory Elements for ANKRD62 Gene

Genomic Location for ANKRD62 Gene

Chromosome:
18
Start:
12,072,533 bp from pter
End:
12,129,764 bp from pter
Size:
57,232 bases
Orientation:
Plus strand

Genomic View for ANKRD62 Gene

Genes around ANKRD62 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ANKRD62 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ANKRD62 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ANKRD62 Gene

Proteins for ANKRD62 Gene

  • Protein details for ANKRD62 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A6NC57-ANR62_HUMAN
    Recommended name:
    Ankyrin repeat domain-containing protein 62
    Protein Accession:
    A6NC57

    Protein attributes for ANKRD62 Gene

    Size:
    917 amino acids
    Molecular mass:
    106446 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=BX649021; Type=Erroneous termination; Positions=558; Note=Translated as Trp.; Evidence={ECO:0000305};

    Alternative splice isoforms for ANKRD62 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ANKRD62 Gene

Proteomics data for ANKRD62 Gene at MOPED

Post-translational modifications for ANKRD62 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ANKRD62 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for ANKRD62 Gene

Domains & Families for ANKRD62 Gene

Gene Families for ANKRD62 Gene

Protein Domains for ANKRD62 Gene

Suggested Antigen Peptide Sequences for ANKRD62 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

A6NC57

UniProtKB/Swiss-Prot:

ANR62_HUMAN :
  • Contains 5 ANK repeats.
Similarity:
  • Contains 5 ANK repeats.
genes like me logo Genes that share domains with ANKRD62: view

Function for ANKRD62 Gene

Phenotypes for ANKRD62 Gene

genes like me logo Genes that share phenotypes with ANKRD62: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for ANKRD62 Gene

Localization for ANKRD62 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ANKRD62 Gene COMPARTMENTS Subcellular localization image for ANKRD62 gene
Compartment Confidence
nucleus 3
cytosol 2

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for ANKRD62 Gene

Pathways & Interactions for ANKRD62 Gene

SuperPathways for ANKRD62 Gene

No Data Available

Interacting Proteins for ANKRD62 Gene

Gene Ontology (GO) - Biological Process for ANKRD62 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ANKRD62 Gene

Drugs & Compounds for ANKRD62 Gene

No Compound Related Data Available

Transcripts for ANKRD62 Gene

mRNA/cDNA for ANKRD62 Gene

(3) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(2) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ANKRD62 Gene

Ankyrin repeat domain 62:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ANKRD62 Gene

No ASD Table

Relevant External Links for ANKRD62 Gene

GeneLoc Exon Structure for
ANKRD62
ECgene alternative splicing isoforms for
ANKRD62

Expression for ANKRD62 Gene

mRNA expression in normal human tissues for ANKRD62 Gene

mRNA differential expression in normal tissues according to GTEx for ANKRD62 Gene

This gene is overexpressed in Testis (x23.1) and Pancreas (x17.4).

Protein differential expression in normal tissues from HIPED for ANKRD62 Gene

This gene is overexpressed in Urinary Bladder (33.5) and Bone marrow mesenchymal stem cell (28.7).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for ANKRD62 Gene



SOURCE GeneReport for Unigene cluster for ANKRD62 Gene Hs.448906

genes like me logo Genes that share expression patterns with ANKRD62: view

Protein tissue co-expression partners for ANKRD62 Gene

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for ANKRD62 Gene

Orthologs for ANKRD62 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ANKRD62 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ANKRD62 35
  • 99.2 (n)
  • 98.47 (a)
ANKRD62 36
  • 98 (a)
OneToOne
cow
(Bos Taurus)
Mammalia -- 36
  • 41 (a)
OneToMany
dog
(Canis familiaris)
Mammalia -- 36
  • 18 (a)
ManyToMany
-- 36
  • 45 (a)
ManyToMany
-- 36
  • 19 (a)
ManyToMany
-- 36
  • 21 (a)
ManyToMany
-- 36
  • 23 (a)
ManyToMany
-- 36
  • 32 (a)
ManyToMany
-- 36
  • 44 (a)
ManyToMany
-- 36
  • 47 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Gm1758 36
  • 34 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 36
  • 15 (a)
OneToMany
chicken
(Gallus gallus)
Aves -- 36
  • 24 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia -- 36
  • 40 (a)
ManyToMany
zebrafish
(Danio rerio)
Actinopterygii ANKRD7 36
  • 11 (a)
OneToMany
Species with no ortholog for ANKRD62:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ANKRD62 Gene

ENSEMBL:
Gene Tree for ANKRD62 (if available)
TreeFam:
Gene Tree for ANKRD62 (if available)

Paralogs for ANKRD62 Gene

Pseudogenes.org Pseudogenes for ANKRD62 Gene

genes like me logo Genes that share paralogs with ANKRD62: view

Variants for ANKRD62 Gene

Sequence variations from dbSNP and Humsavar for ANKRD62 Gene

SNP ID Clin Chr 18 pos Sequence Context AA Info Type
rs1986751 - 12,096,250(+) TGGTG(G/T)CATTT reference, missense
rs6505715 - 12,099,655(+) AGAGA(C/T)GTAAA reference, missense
rs4519391 - 12,115,510(+) TCATT(A/G)AACAA reference, missense
rs7243248 - 12,125,658(+) AGGAA(A/G)CATTA reference, missense
rs1986750 -- 12,095,951(+) GCAGC(A/G)GTTAT intron-variant

Variation tolerance for ANKRD62 Gene

Gene Damage Index Score: 1.96; 36.37% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for ANKRD62 Gene

HapMap Linkage Disequilibrium report
ANKRD62

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for ANKRD62 Gene

Disorders for ANKRD62 Gene

Relevant External Links for ANKRD62

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ANKRD62

No disorders were found for ANKRD62 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ANKRD62 Gene

Publications for ANKRD62 Gene

  1. The full-ORF clone resource of the German cDNA consortium. (PMID: 17974005) Bechtel S. … Schupp I. (BMC Genomics 2007) 4 67

Products for ANKRD62 Gene

Sources for ANKRD62 Gene

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