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Aliases for ANKRD60 Gene

Aliases for ANKRD60 Gene

  • Ankyrin Repeat Domain 60 2 3
  • C20orf86 3 4
  • Ankyrin Repeat Domain-Containing Protein 60 3
  • Chromosome 20 Open Reading Frame 86 2
  • BA196N14.3 3

External Ids for ANKRD60 Gene

Previous Symbols for ANKRD60 Gene

  • C20orf86

Summaries for ANKRD60 Gene

GeneCards Summary for ANKRD60 Gene

ANKRD60 (Ankyrin Repeat Domain 60) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ANKRD60 Gene

Genomics for ANKRD60 Gene

Genomic Location for ANKRD60 Gene

Start:
58,218,454 bp from pter
End:
58,228,653 bp from pter
Size:
10,200 bases
Orientation:
Minus strand

Genomic View for ANKRD60 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ANKRD60 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ANKRD60 Gene

Regulatory Elements for ANKRD60 Gene

Proteins for ANKRD60 Gene

  • Protein details for ANKRD60 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9BZ19-ANR60_HUMAN
    Recommended name:
    Ankyrin repeat domain-containing protein 60
    Protein Accession:
    Q9BZ19
    Secondary Accessions:
    • Q4VXE6

    Protein attributes for ANKRD60 Gene

    Size:
    345 amino acids
    Molecular mass:
    37630 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=CAI94996.3; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305};

neXtProt entry for ANKRD60 Gene

Proteomics data for ANKRD60 Gene at MOPED

Post-translational modifications for ANKRD60 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ANKRD60 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for ANKRD60 Gene

Domains for ANKRD60 Gene

Gene Families for ANKRD60 Gene

HGNC:
  • ANKRD :Ankyrin repeat domain containing

Protein Domains for ANKRD60 Gene

UniProtKB/Swiss-Prot:

ANR60_HUMAN
Domain:
  • Contains 1 ubiquitin-like domain.:
    • Q9BZ19
Similarity:
  • Contains 2 ANK repeats.:
    • Q9BZ19
genes like me logo Genes that share domains with ANKRD60: view

Function for ANKRD60 Gene

Gene Ontology (GO) - Molecular Function for ANKRD60 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding --
genes like me logo Genes that share ontologies with ANKRD60: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ANKRD60 Gene

Localization for ANKRD60 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ANKRD60 Gene COMPARTMENTS Subcellular localization image for ANKRD60 gene
Compartment Confidence
cytosol 3
mitochondrion 3
nucleus 1
peroxisome 1

No data available for Gene Ontology (GO) - Cellular Components for ANKRD60 Gene

Pathways for ANKRD60 Gene

SuperPathways for ANKRD60 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ANKRD60 Gene

None

No data available for Pathways by source for ANKRD60 Gene

Transcripts for ANKRD60 Gene

mRNA/cDNA for ANKRD60 Gene

(3) REFSEQ mRNAs :
(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ANKRD60 Gene

No ASD Table

Relevant External Links for ANKRD60 Gene

GeneLoc Exon Structure for
ANKRD60
ECgene alternative splicing isoforms for
ANKRD60

Expression for ANKRD60 Gene

mRNA expression in normal human tissues for ANKRD60 Gene

mRNA differential expression in normal tissues according to GTEx for ANKRD60 Gene

This gene is overexpressed in Testis (52.3).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for ANKRD60 Gene

genes like me logo Genes that share expressions with ANKRD60: view

Orthologs for ANKRD60 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ANKRD60 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ANKRD60 36
  • 99.5 (n)
  • 98.49 (a)
ANKRD60 37
  • 98 (a)
OneToOne
cow
(Bos Taurus)
Mammalia ANKRD60 36
  • 79.19 (n)
  • 72.49 (a)
ANKRD60 37
  • 60 (a)
OneToOne
dog
(Canis familiaris)
Mammalia ANKRD60 36
  • 78.07 (n)
  • 69.43 (a)
ANKRD60 37
  • 60 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Ankrd60 36
  • 73.16 (n)
  • 66.67 (a)
Ankrd60 16
Ankrd60 37
  • 63 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia ANKRD60 37
  • 57 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Ankrd60 36
  • 72.65 (n)
  • 68.21 (a)
chicken
(Gallus gallus)
Aves ANKRD60 36
  • 56.65 (n)
  • 47.85 (a)
ANKRD60 37
  • 43 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia ANKRD60 37
  • 40 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia ankrd60 36
  • 51.44 (n)
  • 44.44 (a)
Species with no ortholog for ANKRD60:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ANKRD60 Gene

ENSEMBL:
Gene Tree for ANKRD60 (if available)
TreeFam:
Gene Tree for ANKRD60 (if available)

Paralogs for ANKRD60 Gene

Selected SIMAP similar genes for ANKRD60 Gene using alignment to 2 proteins:

genes like me logo Genes that share paralogs with ANKRD60: view

No data available for Paralogs for ANKRD60 Gene

Variants for ANKRD60 Gene

Sequence variations from dbSNP and Humsavar for ANKRD60 Gene

SNP ID Clin Chr 20 pos Sequence Context AA Info Type MAF
rs521615 -- 58,221,211(+) CCTGA(C/T)TGGTG intron-variant
rs550913 -- 58,220,333(+) ACTCC(A/G)CATTG intron-variant
rs573485 -- 58,222,961(+) TGTTA(C/T)TCACA intron-variant
rs583987 -- 58,218,490(+) CCACC(A/G)GGAGC utr-variant-3-prime
rs584855 - 58,218,650(+) CAGGC(A/G)GTGTG reference, missense

Relevant External Links for ANKRD60 Gene

HapMap Linkage Disequilibrium report
ANKRD60

No data available for Structural Variations from Database of Genomic Variants (DGV) for ANKRD60 Gene

Disorders for ANKRD60 Gene

Relevant External Links for ANKRD60

Genetic Association Database (GAD)
ANKRD60
Human Genome Epidemiology (HuGE) Navigator
ANKRD60
genes like me logo Genes that share disorders with ANKRD60: view

No data available for UniProtKB/Swiss-Prot for ANKRD60 Gene

Publications for ANKRD60 Gene

  1. The DNA sequence and comparative analysis of human chromosome 20. (PMID: 11780052) Deloukas P. … Rogers J. (Nature 2001) 3 4
  2. Identification of 15 loci influencing height in a Korean population. (PMID: 19893584) Kim J.J. … Lee J.K. (J. Hum. Genet. 2010) 3 49
  3. Variation at the NFATC2 locus increases the risk of thiazolidinedione-induced edema in the Diabetes REduction Assessment with ramipril and rosiglitazone Medication (DREAM) study. (PMID: 20628086) Bailey S.D. … Anand S. (Diabetes Care 2010) 3 49
  4. Gene-centric association signals for lipids and apolipoproteins identified via the HumanCVD BeadChip. (PMID: 19913121) Talmud P.J. … . (Am. J. Hum. Genet. 2009) 3

Products for ANKRD60 Gene

Sources for ANKRD60 Gene

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