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Aliases for ANKRD36BP2 Gene

Aliases for ANKRD36BP2 Gene

  • Ankyrin Repeat Domain 36B Pseudogene 2 2 3 5

External Ids for ANKRD36BP2 Gene

Previous GeneCards Identifiers for ANKRD36BP2 Gene

  • GC02P087984
  • GC02P089068
  • GC02P089069

Summaries for ANKRD36BP2 Gene

GeneCards Summary for ANKRD36BP2 Gene

ANKRD36BP2 (Ankyrin Repeat Domain 36B Pseudogene 2) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ANKRD36BP2 Gene

Genomics for ANKRD36BP2 Gene

Regulatory Elements for ANKRD36BP2 Gene

Enhancers for ANKRD36BP2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02F088690 1.1 ENCODE 20.8 -74.2 -74193 2.9 PKNOX1 CREB3L1 WRNIP1 ZFP64 ARID4B SIN3A FEZF1 DMAP1 YY1 SLC30A9 ANKRD36BP2 KRCC1 RPIA TEX37 EIF2AK3 LOC102724805
GH02F088831 1 Ensembl ENCODE 18.4 +66.8 66804 1.8 CTCF MAX RAD21 RELA ZNF316 POLR2A ZNF143 SMC3 MAFK ZNF263 ANKRD36BP2 IGKDEL LOC105374855
GH02F088751 1.4 FANTOM5 Ensembl ENCODE 11.8 -11.8 -11823 5.2 HDAC1 PKNOX1 TAL1 ETV1 ZNF175 CEBPG IRF9 POLR2A SCRT2 ZNF584 RPIA ANKRD36BP2 LOC101928403 EIF2AK3 GC02P088737
GH02F088680 0.9 Ensembl ENCODE 13 -85.1 -85101 1.0 GATAD2A TFE3 NFIA SAP130 HLF NR2F1 RARA NR2F6 BCL6 SMAD4 ANKRD36BP2 LOC102724805 GC02M088650
GH02F088605 0.8 ENCODE 13.3 -158.0 -158018 4.9 TBP PKNOX1 TBL1XR1 CBX5 ETV6 CREM ZNF362 CBFB CEBPB JUNB ANKRD36BP2 RPIA TEX37 EIF2AK3 LOC101928403 GC02P088558
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ANKRD36BP2 on UCSC Golden Path with GeneCards custom track

Promoters for ANKRD36BP2 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001824905 593 2000 CTCF KLF1 MAZ ZNF687 USF1 RNF2 MAX MNT KLF4 E2F1

Genomic Location for ANKRD36BP2 Gene

Chromosome:
2
Start:
88,765,807 bp from pter
End:
88,806,612 bp from pter
Size:
40,806 bases
Orientation:
Plus strand

Genomic View for ANKRD36BP2 Gene

Genes around ANKRD36BP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ANKRD36BP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ANKRD36BP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ANKRD36BP2 Gene

Proteins for ANKRD36BP2 Gene

Post-translational modifications for ANKRD36BP2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ANKRD36BP2 Gene

Domains & Families for ANKRD36BP2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ANKRD36BP2 Gene

Function for ANKRD36BP2 Gene

Phenotypes for ANKRD36BP2 Gene

GenomeRNAi human phenotypes for ANKRD36BP2:
genes like me logo Genes that share phenotypes with ANKRD36BP2: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ANKRD36BP2 Gene

Localization for ANKRD36BP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ANKRD36BP2 Gene

Pathways & Interactions for ANKRD36BP2 Gene

SuperPathways for ANKRD36BP2 Gene

No Data Available

Interacting Proteins for ANKRD36BP2 Gene

Gene Ontology (GO) - Biological Process for ANKRD36BP2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ANKRD36BP2 Gene

Transcripts for ANKRD36BP2 Gene

mRNA/cDNA for ANKRD36BP2 Gene

(6) Additional mRNA sequences :
(7) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ANKRD36BP2 Gene

Ankyrin repeat domain 36B pseudogene 2:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ANKRD36BP2 Gene

No ASD Table

Relevant External Links for ANKRD36BP2 Gene

GeneLoc Exon Structure for
ANKRD36BP2
ECgene alternative splicing isoforms for
ANKRD36BP2

Expression for ANKRD36BP2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ANKRD36BP2 Gene

mRNA differential expression in normal tissues according to GTEx for ANKRD36BP2 Gene

This gene is overexpressed in Testis (x6.7), Minor Salivary Gland (x4.9), Spleen (x4.5), and Colon - Transverse (x4.0).

NURSA nuclear receptor signaling pathways regulating expression of ANKRD36BP2 Gene:

ANKRD36BP2

SOURCE GeneReport for Unigene cluster for ANKRD36BP2 Gene:

Hs.105323
genes like me logo Genes that share expression patterns with ANKRD36BP2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for ANKRD36BP2 Gene

Orthologs for ANKRD36BP2 Gene

Evolution for ANKRD36BP2 Gene

ENSEMBL:
Gene Tree for ANKRD36BP2 (if available)
TreeFam:
Gene Tree for ANKRD36BP2 (if available)

No data available for Orthologs for ANKRD36BP2 Gene

Paralogs for ANKRD36BP2 Gene

No data available for Paralogs for ANKRD36BP2 Gene

Variants for ANKRD36BP2 Gene

Sequence variations from dbSNP and Humsavar for ANKRD36BP2 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs10174411 -- 88,783,633(+) ACTTT(A/T)GTTAT intron-variant
rs10174719 -- 88,797,512(+) ACTGA(C/T)ATGTT intron-variant
rs10174745 -- 88,783,886(+) TTTGT(A/G)GAAGT intron-variant
rs10185049 -- 88,779,876(+) TGTTT(C/T)CCCCT intron-variant
rs10198250 -- 88,783,505(+) AAGAA(G/T)ATTTG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ANKRD36BP2 Gene

Variant ID Type Subtype PubMed ID
nsv979041 CNV duplication 23825009
nsv956665 CNV deletion 24416366
nsv955229 CNV duplication 24416366
nsv955228 CNV deletion 24416366
nsv834290 CNV loss 17160897
nsv7318 OTHER inversion 18451855
nsv582386 CNV loss 21841781
nsv582384 CNV loss 21841781
nsv508152 CNV deletion 20534489
nsv470476 CNV gain 18288195
nsv2824 CNV deletion 18451855
nsv213270 CNV deletion 16902084
nsv190 CNV deletion 15895083
nsv1153524 CNV duplication 26484159
nsv1148611 CNV deletion 26484159
nsv1148100 CNV duplication 26484159
nsv1147356 CNV duplication 26484159
nsv1138799 CNV deletion 24896259
nsv1138798 CNV deletion 24896259
nsv1134883 CNV deletion 24896259
nsv1130752 CNV deletion 24896259
nsv1128792 CNV duplication 24896259
nsv1124795 CNV duplication 24896259
nsv1123347 CNV deletion 24896259
nsv1118629 CNV duplication 24896259
nsv1114106 CNV deletion 24896259
nsv1114104 CNV deletion 24896259
nsv1110340 CNV duplication 24896259
nsv1109271 CNV deletion 24896259
nsv1077353 CNV duplication 25765185
nsv1072005 CNV deletion 25765185
esv3591596 CNV loss 21293372
esv3559791 CNV deletion 23714750
esv26298 CNV gain 19812545
esv2169739 CNV deletion 18987734
esv2058004 CNV deletion 18987734
dgv6947n54 CNV gain 21841781
dgv61n16 CNV deletion 17901297
dgv1952n106 CNV deletion 24896259
dgv1951n106 CNV deletion 24896259

Relevant External Links for ANKRD36BP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ANKRD36BP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ANKRD36BP2 Gene

Disorders for ANKRD36BP2 Gene

Relevant External Links for ANKRD36BP2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ANKRD36BP2

No disorders were found for ANKRD36BP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ANKRD36BP2 Gene

Publications for ANKRD36BP2 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for ANKRD36BP2 Gene

Sources for ANKRD36BP2 Gene

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