Free for academic non-profit institutions. Other users need a Commercial license

Aliases for ANKRD36BP1 Gene

Subcategory (RNA class) for ANKRD36BP1 Gene

lncRNA

Aliases for ANKRD36BP1 Gene

  • Ankyrin Repeat Domain 36B Pseudogene 1 2 3
  • Ankyrin Repeat Domain 26-Like 1 2 3
  • ANKRD26L1 3 4
  • Ankyrin Repeat Domain-Containing Protein 36B Pseudogene 1 4
  • Ankyrin Repeat Domain 36B-Like 1 (Pseudogene) 3
  • Ankyrin Repeat Domain 36B-Like 1 2
  • ANKRD36BL1 3

External Ids for ANKRD36BP1 Gene

ORGUL Members for ANKRD36BP1 Gene

Previous Symbols for ANKRD36BP1 Gene

  • ANKRD26L1
  • ANKRD36BL1

Summaries for ANKRD36BP1 Gene

GeneCards Summary for ANKRD36BP1 Gene

ANKRD36BP1 (Ankyrin Repeat Domain 36B Pseudogene 1) is a Pseudogene, and belongs to lncRNA RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ANKRD36BP1 Gene

Genomics for ANKRD36BP1 Gene

Genomic Location for ANKRD36BP1 Gene

Start:
168,245,565 bp from pter
End:
168,247,430 bp from pter
Size:
1,866 bases
Orientation:
Minus strand

Genomic View for ANKRD36BP1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ANKRD36BP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ANKRD36BP1 Gene

No data available for Regulatory Elements for ANKRD36BP1 Gene

Proteins for ANKRD36BP1 Gene

  • Protein details for ANKRD36BP1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q96IX9-A26L1_HUMAN
    Recommended name:
    Putative ankyrin repeat domain-containing protein 26-like 1
    Protein Accession:
    Q96IX9
    Secondary Accessions:

    Protein attributes for ANKRD36BP1 Gene

    Size:
    119 amino acids
    Molecular mass:
    14172 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ANKRD36BP1 Gene

Proteomics data for ANKRD36BP1 Gene at MOPED

Post-translational modifications for ANKRD36BP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ANKRD36BP1 Gene

Domains for ANKRD36BP1 Gene

Protein Domains for ANKRD36BP1 Gene

ProtoNet:
genes like me logo Genes that share domains with ANKRD36BP1: view

No data available for Gene Families and UniProtKB/Swiss-Prot for ANKRD36BP1 Gene

Function for ANKRD36BP1 Gene

Gene Ontology (GO) - Molecular Function for ANKRD36BP1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 16189514
genes like me logo Genes that share ontologies with ANKRD36BP1: view

miRNA for ANKRD36BP1 Gene

miRTarBase miRNAs that target ANKRD36BP1

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for ANKRD36BP1 Gene

Localization for ANKRD36BP1 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ANKRD36BP1 Gene COMPARTMENTS Subcellular localization image for ANKRD36BP1 gene
Compartment Confidence
cytosol 3
nucleus 3
plasma membrane 2

No data available for Gene Ontology (GO) - Cellular Components for ANKRD36BP1 Gene

Pathways for ANKRD36BP1 Gene

SuperPathways for ANKRD36BP1 Gene

No Data Available

Interacting Proteins for ANKRD36BP1 Gene

Gene Ontology (GO) - Biological Process for ANKRD36BP1 Gene

None

No data available for Pathways by source for ANKRD36BP1 Gene

Transcripts for ANKRD36BP1 Gene

mRNA/cDNA for ANKRD36BP1 Gene

(2) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ANKRD36BP1 Gene

Ankyrin repeat domain 36B pseudogene 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ANKRD36BP1 Gene

No ASD Table

Relevant External Links for ANKRD36BP1 Gene

GeneLoc Exon Structure for
ANKRD36BP1
ECgene alternative splicing isoforms for
ANKRD36BP1

Expression for ANKRD36BP1 Gene

mRNA expression in normal human tissues for ANKRD36BP1 Gene

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for ANKRD36BP1 Gene

SOURCE GeneReport for Unigene cluster for ANKRD36BP1 Gene Hs.537067

genes like me logo Genes that share expressions with ANKRD36BP1: view

Orthologs for ANKRD36BP1 Gene

Evolution for ANKRD36BP1 Gene

ENSEMBL:
Gene Tree for ANKRD36BP1 (if available)
TreeFam:
Gene Tree for ANKRD36BP1 (if available)

No data available for Orthologs for ANKRD36BP1 Gene

Paralogs for ANKRD36BP1 Gene

genes like me logo Genes that share paralogs with ANKRD36BP1: view

No data available for Paralogs for ANKRD36BP1 Gene

Variants for ANKRD36BP1 Gene

Sequence variations from dbSNP and Humsavar for ANKRD36BP1 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs2205697 -- 168,246,337(-) GAAGA(C/T)AAAAT nc-transcript-variant
rs2205698 -- 168,246,267(-) AGTAA(C/T)TGATA nc-transcript-variant
rs2205699 -- 168,246,261(-) TGATA(G/T)TCAAG nc-transcript-variant
rs3062328 -- 168,245,582(+) TTTTT(-/T)GTAGA nc-transcript-variant
rs3795609 -- 168,246,315(+) CCAGT(G/T)GCTGT nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for ANKRD36BP1 Gene

Variant ID Type Subtype PubMed ID
nsv872526 CNV Gain 21882294
nsv831825 CNV Gain+Loss 17160897

Relevant External Links for ANKRD36BP1 Gene

HapMap Linkage Disequilibrium report
ANKRD36BP1

Disorders for ANKRD36BP1 Gene

No disorders were found for ANKRD36BP1 Gene.

No data available for UniProtKB/Swiss-Prot for ANKRD36BP1 Gene

Publications for ANKRD36BP1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  2. Towards a proteome-scale map of the human protein-protein interaction network. (PMID: 16189514) Rual J.F. … Vidal M. (Nature 2005) 3
  3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  4. Interactions of pathological hallmark proteins: tubulin polymerization promoting protein/p25, beta-amyloid, and alpha-synuclein. (PMID: 21832049) OlA!h J. … OvA!di J. (J. Biol. Chem. 2011) 3
  5. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 3

Products for ANKRD36BP1 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate ANKRD36BP1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for ANKRD36BP1
    • Block miRNA regulation of ANKRD36BP1 using miScript Target Protectors

    Sources for ANKRD36BP1 Gene

    Back to Top

    Content