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Aliases for ANKRD36B Gene

Aliases for ANKRD36B Gene

  • Ankyrin Repeat Domain 36B 2 3
  • CLL-Associated Antigen KW-1 2 3 4
  • Melanoma-Associated Antigen 2 3
  • KIAA1641 2 3
  • Ankyrin Repeat Domain-Containing Protein 36B 3

External Ids for ANKRD36B Gene

Previous HGNC Symbols for ANKRD36B Gene

  • KIAA1641

Previous GeneCards Identifiers for ANKRD36B Gene

  • GC02M098108

Summaries for ANKRD36B Gene

GeneCards Summary for ANKRD36B Gene

ANKRD36B (Ankyrin Repeat Domain 36B) is a Protein Coding gene. Diseases associated with ANKRD36B include acral lentiginous melanoma and melanoma.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ANKRD36B Gene

Genomics for ANKRD36B Gene

Regulatory Elements for ANKRD36B Gene

Genomic Location for ANKRD36B Gene

Start:
97,492,663 bp from pter
End:
97,590,245 bp from pter
Size:
97,583 bases
Orientation:
Minus strand

Genomic View for ANKRD36B Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ANKRD36B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ANKRD36B Gene

Proteins for ANKRD36B Gene

  • Protein details for ANKRD36B Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8N2N9-AN36B_HUMAN
    Recommended name:
    Ankyrin repeat domain-containing protein 36B
    Protein Accession:
    Q8N2N9
    Secondary Accessions:
    • Q08AK5
    • Q6IPR0
    • Q6PI49
    • Q8IZM7
    • Q8TDH6
    • Q96N30
    • Q9H759

    Protein attributes for ANKRD36B Gene

    Size:
    1353 amino acids
    Molecular mass:
    153582 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAI25133.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305}; Sequence=AAI25134.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305}; Sequence=AAL99915.1; Type=Erroneous initiation; Note=Translation N-terminally shortened.; Evidence={ECO:0000305}; Sequence=BAB15039.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305}; Sequence=BAB71081.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305};

    Alternative splice isoforms for ANKRD36B Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ANKRD36B Gene

Proteomics data for ANKRD36B Gene at MOPED

Post-translational modifications for ANKRD36B Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ANKRD36B Gene

No data available for DME Specific Peptides for ANKRD36B Gene

Domains for ANKRD36B Gene

Gene Families for ANKRD36B Gene

HGNC:
  • ANKRD :Ankyrin repeat domain containing

Protein Domains for ANKRD36B Gene

Suggested Antigen Peptide Sequences for ANKRD36B Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q8N2N9

UniProtKB/Swiss-Prot:

AN36B_HUMAN :
  • Q8N2N9
Family:
  • Belongs to the ANKRD36 family.
Similarity:
  • Contains 6 ANK repeats.
genes like me logo Genes that share domains with ANKRD36B: view

Function for ANKRD36B Gene

Gene Ontology (GO) - Molecular Function for ANKRD36B Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 25416956
genes like me logo Genes that share ontologies with ANKRD36B: view

Animal Model Products

CRISPR Products

miRNA for ANKRD36B Gene

miRTarBase miRNAs that target ANKRD36B

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for ANKRD36B Gene

Localization for ANKRD36B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ANKRD36B Gene

Pathways for ANKRD36B Gene

SuperPathways for ANKRD36B Gene

No Data Available

Interacting Proteins for ANKRD36B Gene

Selected Interacting proteins: Q8N2N9-AN36B_HUMAN for ANKRD36B Gene via UniProtKB

Symbol External ID(s) Details
FAM9B

Gene Ontology (GO) - Biological Process for ANKRD36B Gene

None

No data available for Pathways by source for ANKRD36B Gene

Transcripts for ANKRD36B Gene

Unigene Clusters for ANKRD36B Gene

Ankyrin repeat domain 36B:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ANKRD36B

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ANKRD36B Gene

No ASD Table

Relevant External Links for ANKRD36B Gene

GeneLoc Exon Structure for
ANKRD36B
ECgene alternative splicing isoforms for
ANKRD36B

Expression for ANKRD36B Gene

mRNA expression in normal human tissues for ANKRD36B Gene

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for ANKRD36B Gene

SOURCE GeneReport for Unigene cluster for ANKRD36B Gene Hs.532921

genes like me logo Genes that share expressions with ANKRD36B: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for ANKRD36B Gene

Orthologs for ANKRD36B Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for ANKRD36B Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ANKRD36B 35
  • 97.89 (n)
  • 95.95 (a)
Species with no ortholog for ANKRD36B:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ANKRD36B Gene

ENSEMBL:
Gene Tree for ANKRD36B (if available)
TreeFam:
Gene Tree for ANKRD36B (if available)

Paralogs for ANKRD36B Gene

genes like me logo Genes that share paralogs with ANKRD36B: view

No data available for Paralogs for ANKRD36B Gene

Variants for ANKRD36B Gene

Sequence variations from dbSNP and Humsavar for ANKRD36B Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type MAF
rs1061557 -- 97,587,402(-) GTGTT(A/T)GTAAG intron-variant
rs1667207 -- 97,494,595(+) AATCT(C/T)GACAC intron-variant
rs1709753 -- 97,494,515(+) GGCAA(A/G)AAGCT intron-variant
rs1709755 -- 97,496,833(+) tgtgt(A/G)tatat intron-variant
rs1730375 -- 97,561,554(-) TATTA(A/C/T)ACTTT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ANKRD36B Gene

Variant ID Type Subtype PubMed ID
dgv650e201 CNV Deletion 23290073
esv718 CNV CNV 17122850
dgv4250n71 CNV Loss 21882294
nsv522486 CNV Gain 19592680
nsv874695 CNV Loss 21882294
nsv7323 OTHER Inversion 18451855
essv18990 CNV CNV 17122850
essv17999 CNV CNV 17122850
esv25217 CNV Gain 19812545
nsv10099 CNV Gain 18304495
dgv721e199 CNV Deletion 23128226
nsv820699 CNV Deletion 20802225
nsv442803 CNV CNV 18776908
esv2422044 CNV Deletion 20811451
nsv508852 CNV Insertion 20534489
esv32869 CNV Loss 17666407
nsv10100 CNV Loss 18304495
nsv10101 CNV Gain 18304495
nsv499474 CNV Gain 21111241
nsv10102 CNV Gain 18304495
nsv2836 CNV Insertion 18451855
esv2662364 CNV Deletion 23128226
esv2720423 CNV Deletion 23290073
esv998247 CNV Insertion 20482838

Relevant External Links for ANKRD36B Gene

HapMap Linkage Disequilibrium report
ANKRD36B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ANKRD36B Gene

Disorders for ANKRD36B Gene

MalaCards: The human disease database

MalaCards: The human disease database. (2) Diseases for ANKRD36B Gene including...

Search for ANKRD36B Gene in MalaCards »

(4) Novoseek inferred disease relationships for ANKRD36B Gene

Disease -log(P) Hits PubMed IDs
melanoma 78 41
ocular melanoma 60.4 1
mimicry 54.5 4
tumors 26.1 4
genes like me logo Genes that share disorders with ANKRD36B: view

No data available for UniProtKB/Swiss-Prot for ANKRD36B Gene

Publications for ANKRD36B Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  3. Prediction of the coding sequences of unidentified human genes. XVIII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro. (PMID: 10997877) Nagase T. … Ohara O. (DNA Res. 2000) 2 3
  4. Expressed sequence tag analysis of human RPE/choroid for the NEIBank project: over 6000 non-redundant transcripts, novel genes and splice variants. (PMID: 12107410) Wistow G. … Peterson K. (Mol. Vis. 2002) 3
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for ANKRD36B Gene

Sources for ANKRD36B Gene

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