Free for academic non-profit institutions. Other users need a Commercial license

Aliases for ANKRD34B Gene

Aliases for ANKRD34B Gene

  • Ankyrin Repeat Domain 34B 2 3
  • Ankyrin Repeat Domain-Containing Protein 34B 3
  • Dendritic Phosphoprotein 58 KDa 3
  • Cytosolic Phosphoprotein DP58 3
  • DP58 3

External Ids for ANKRD34B Gene

Previous GeneCards Identifiers for ANKRD34B Gene

  • GC05M079888
  • GC05M075060

Summaries for ANKRD34B Gene

GeneCards Summary for ANKRD34B Gene

ANKRD34B (Ankyrin Repeat Domain 34B) is a Protein Coding gene. An important paralog of this gene is ANKRD34C.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ANKRD34B Gene

Genomics for ANKRD34B Gene

Regulatory Elements for ANKRD34B Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for ANKRD34B Gene

Start:
80,556,755 bp from pter
End:
80,570,488 bp from pter
Size:
13,734 bases
Orientation:
Minus strand

Genomic View for ANKRD34B Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ANKRD34B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ANKRD34B Gene

Proteins for ANKRD34B Gene

  • Protein details for ANKRD34B Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A5PLL1-AN34B_HUMAN
    Recommended name:
    Ankyrin repeat domain-containing protein 34B
    Protein Accession:
    A5PLL1
    Secondary Accessions:
    • B2RPH1
    • Q68D79

    Protein attributes for ANKRD34B Gene

    Size:
    514 amino acids
    Molecular mass:
    56414 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ANKRD34B Gene

Proteomics data for ANKRD34B Gene at MOPED

Post-translational modifications for ANKRD34B Gene

Other Protein References for ANKRD34B Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for ANKRD34B Gene

Domains for ANKRD34B Gene

Gene Families for ANKRD34B Gene

HGNC:
  • ANKRD :Ankyrin repeat domain containing

Protein Domains for ANKRD34B Gene

Suggested Antigen Peptide Sequences for ANKRD34B Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

A5PLL1

UniProtKB/Swiss-Prot:

AN34B_HUMAN :
  • A5PLL1
Family:
  • Belongs to the ANKRD34 family.
Similarity:
  • Contains 4 ANK repeats.
genes like me logo Genes that share domains with ANKRD34B: view

Function for ANKRD34B Gene

Gene Ontology (GO) - Molecular Function for ANKRD34B Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding --
genes like me logo Genes that share ontologies with ANKRD34B: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ANKRD34B Gene

Localization for ANKRD34B Gene

Subcellular locations from UniProtKB/Swiss-Prot for ANKRD34B Gene

Cytoplasm. Nucleus.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ANKRD34B Gene COMPARTMENTS Subcellular localization image for ANKRD34B gene
Compartment Confidence
cytosol 2
nucleus 2

Gene Ontology (GO) - Cellular Components for ANKRD34B Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA --
GO:0005737 cytoplasm IEA --
genes like me logo Genes that share ontologies with ANKRD34B: view

Pathways for ANKRD34B Gene

SuperPathways for ANKRD34B Gene

No Data Available

Interacting Proteins for ANKRD34B Gene

Gene Ontology (GO) - Biological Process for ANKRD34B Gene

None

No data available for Pathways by source for ANKRD34B Gene

Transcripts for ANKRD34B Gene

mRNA/cDNA for ANKRD34B Gene

(5) Selected AceView cDNA sequences:
(6) REFSEQ mRNAs :
(4) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ANKRD34B Gene

Ankyrin repeat domain 34B:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ANKRD34B

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for ANKRD34B

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ANKRD34B Gene

No ASD Table

Relevant External Links for ANKRD34B Gene

GeneLoc Exon Structure for
ANKRD34B
ECgene alternative splicing isoforms for
ANKRD34B

Expression for ANKRD34B Gene

mRNA expression in normal human tissues for ANKRD34B Gene

mRNA differential expression in normal tissues according to GTEx for ANKRD34B Gene

This gene is overexpressed in Brain - Nucleus accumbens (basal ganglia) (14.9), Brain - Putamen (basal ganglia) (12.8), and Brain - Caudate (basal ganglia) (12.7).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for ANKRD34B Gene

SOURCE GeneReport for Unigene cluster for ANKRD34B Gene Hs.519404

genes like me logo Genes that share expressions with ANKRD34B: view

In Situ Assay Products

No data available for mRNA Expression by UniProt/SwissProt for ANKRD34B Gene

Orthologs for ANKRD34B Gene

This gene was present in the common ancestor of chordates.

Orthologs for ANKRD34B Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ANKRD34B 35
  • 99.61 (n)
  • 99.22 (a)
ANKRD34B 36
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia ANKRD34B 35
  • 88.87 (n)
  • 89.45 (a)
ANKRD34B 36
  • 89 (a)
OneToOne
dog
(Canis familiaris)
Mammalia ANKRD34B 35
  • 88.07 (n)
  • 88.13 (a)
ANKRD34B 36
  • 88 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Ankrd34b 35
  • 81.76 (n)
  • 82.48 (a)
Ankrd34b 16
Ankrd34b 36
  • 82 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia ANKRD34B 36
  • 72 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Ankrd34b 35
  • 81.5 (n)
  • 82.87 (a)
chicken
(Gallus gallus)
Aves ANKRD34B 36
  • 63 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia -- 36
  • 67 (a)
OneToMany
-- 36
  • 67 (a)
OneToMany
tropical clawed frog
(Silurana tropicalis)
Amphibia ankrd34b 35
  • 66.27 (n)
  • 65.82 (a)
zebrafish
(Danio rerio)
Actinopterygii ankrd34ba 36
  • 44 (a)
OneToMany
ankrd34bb 35
  • 56.91 (n)
  • 56.11 (a)
ankrd34bb 36
  • 49 (a)
OneToMany
Species with no ortholog for ANKRD34B:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ANKRD34B Gene

ENSEMBL:
Gene Tree for ANKRD34B (if available)
TreeFam:
Gene Tree for ANKRD34B (if available)

Paralogs for ANKRD34B Gene

Paralogs for ANKRD34B Gene

Selected SIMAP similar genes for ANKRD34B Gene using alignment to 2 proteins:

genes like me logo Genes that share paralogs with ANKRD34B: view

Variants for ANKRD34B Gene

Sequence variations from dbSNP and Humsavar for ANKRD34B Gene

SNP ID Clin Chr 05 pos Sequence Context AA Info Type MAF
rs32857 - 80,559,553(-) AAAGT(C/T)GCCCT missense, reference
rs39983 -- 80,558,269(-) CAAAC(A/G)AAAGG utr-variant-3-prime
rs118526 -- 80,567,725(-) ATGAT(G/T)AACTT intron-variant
rs173606 -- 80,561,346(-) TTTCA(A/G)TTTCC intron-variant
rs187262 -- 80,560,057(-) TTGCC(A/G)TCTTT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ANKRD34B Gene

Variant ID Type Subtype PubMed ID
nsv483112 CNV Loss 15286789

Relevant External Links for ANKRD34B Gene

HapMap Linkage Disequilibrium report
ANKRD34B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ANKRD34B Gene

Disorders for ANKRD34B Gene

Relevant External Links for ANKRD34B

Genetic Association Database (GAD)
ANKRD34B
genes like me logo Genes that share disorders with ANKRD34B: view

No data available for UniProtKB/Swiss-Prot for ANKRD34B Gene

Publications for ANKRD34B Gene

  1. A novel phosphoprotein is induced during bone marrow commitment to dendritic cells. (PMID: 15358210) Al-Shaibi N. … Ghosh S.K. (Biochem. Biophys. Res. Commun. 2004) 3 23
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  3. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S. … Cupples L.A. (BMC Med. Genet. 2007) 48
  4. The DNA sequence and comparative analysis of human chromosome 5. (PMID: 15372022) Schmutz J. … Rubin E.M. (Nature 2004) 4
  5. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4

Products for ANKRD34B Gene

Sources for ANKRD34B Gene

Back to Top

Content