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Aliases for ANKRD33 Gene

Aliases for ANKRD33 Gene

  • Ankyrin Repeat Domain 33 2 3
  • C12orf7 3 4
  • Ankyrin Repeat Domain-Containing Protein 33 3
  • Chromosome 12 Open Reading Frame 7 2
  • PANKY 3

External Ids for ANKRD33 Gene

Previous HGNC Symbols for ANKRD33 Gene

  • C12orf7

Previous GeneCards Identifiers for ANKRD33 Gene

  • GC12P050569
  • GC12P052281
  • GC12P049316

Summaries for ANKRD33 Gene

GeneCards Summary for ANKRD33 Gene

ANKRD33 (Ankyrin Repeat Domain 33) is a Protein Coding gene. An important paralog of this gene is ANKRD33B.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ANKRD33 Gene

Genomics for ANKRD33 Gene

Regulatory Elements for ANKRD33 Gene

Genomic Location for ANKRD33 Gene

Start:
51,887,960 bp from pter
End:
51,891,721 bp from pter
Size:
3,762 bases
Orientation:
Plus strand

Genomic View for ANKRD33 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ANKRD33 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ANKRD33 Gene

Proteins for ANKRD33 Gene

  • Protein details for ANKRD33 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q7Z3H0-ANR33_HUMAN
    Recommended name:
    Ankyrin repeat domain-containing protein 33
    Protein Accession:
    Q7Z3H0
    Secondary Accessions:
    • Q0VAA7
    • Q5K619
    • Q5K621
    • Q5K622
    • Q5K623
    • Q5K624
    • Q6ZUN0

    Protein attributes for ANKRD33 Gene

    Size:
    272 amino acids
    Molecular mass:
    29011 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAQ07991.1; Type=Erroneous initiation; Note=Translation N-terminally shortened.; Evidence={ECO:0000305}; Sequence=AAQ07992.1; Type=Erroneous initiation; Note=Translation N-terminally shortened.; Evidence={ECO:0000305};

    Alternative splice isoforms for ANKRD33 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ANKRD33 Gene

Proteomics data for ANKRD33 Gene at MOPED

Post-translational modifications for ANKRD33 Gene

No Post-translational modifications

Other Protein References for ANKRD33 Gene

No data available for DME Specific Peptides for ANKRD33 Gene

Domains for ANKRD33 Gene

Gene Families for ANKRD33 Gene

HGNC:
  • ANKRD :Ankyrin repeat domain containing

Protein Domains for ANKRD33 Gene

Suggested Antigen Peptide Sequences for ANKRD33 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q7Z3H0

UniProtKB/Swiss-Prot:

ANR33_HUMAN :
  • Q7Z3H0
Similarity:
  • Contains 3 ANK repeats.
genes like me logo Genes that share domains with ANKRD33: view

Function for ANKRD33 Gene

Gene Ontology (GO) - Molecular Function for ANKRD33 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding --
genes like me logo Genes that share ontologies with ANKRD33: view

Animal Model Products

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ANKRD33

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ANKRD33 Gene

Localization for ANKRD33 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ANKRD33 Gene COMPARTMENTS Subcellular localization image for ANKRD33 gene
Compartment Confidence
cytosol 2
nucleus 2
extracellular 1
golgi apparatus 1
mitochondrion 1
plasma membrane 1

Gene Ontology (GO) - Cellular Components for ANKRD33 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IBA --
GO:0005829 cytosol IEA --
genes like me logo Genes that share ontologies with ANKRD33: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot for ANKRD33 Gene

Pathways for ANKRD33 Gene

SuperPathways for ANKRD33 Gene

No Data Available

Interacting Proteins for ANKRD33 Gene

Gene Ontology (GO) - Biological Process for ANKRD33 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000122 negative regulation of transcription from RNA polymerase II promoter IBA --
GO:0035914 skeletal muscle cell differentiation IEA --
GO:2000678 negative regulation of transcription regulatory region DNA binding IBA --
genes like me logo Genes that share ontologies with ANKRD33: view

No data available for Pathways by source for ANKRD33 Gene

Transcripts for ANKRD33 Gene

Unigene Clusters for ANKRD33 Gene

Ankyrin repeat domain 33:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ANKRD33

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for ANKRD33
  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ANKRD33 Gene

ExUns: 1a · 1b · 1c · 1d ^ 2a · 2b · 2c ^ 3 ^ 4a · 4b ^ 5 ^ 6a · 6b · 6c ^ 7a · 7b
SP1: - - -
SP2: - -
SP3: - - - -
SP4: - - - - -
SP5:
SP6:

Relevant External Links for ANKRD33 Gene

GeneLoc Exon Structure for
ANKRD33
ECgene alternative splicing isoforms for
ANKRD33

Expression for ANKRD33 Gene

mRNA expression in normal human tissues for ANKRD33 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for ANKRD33 Gene

This gene is overexpressed in Pituitary (6.9).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for ANKRD33 Gene

SOURCE GeneReport for Unigene cluster for ANKRD33 Gene Hs.433492

genes like me logo Genes that share expressions with ANKRD33: view

In Situ Assay Products

No data available for mRNA Expression by UniProt/SwissProt for ANKRD33 Gene

Orthologs for ANKRD33 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ANKRD33 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ANKRD33 35
  • 99.34 (n)
  • 99.12 (a)
ANKRD33 36
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia ANKRD33 36
  • 75 (a)
OneToOne
LOC787340 35
  • 84.31 (n)
  • 79.26 (a)
dog
(Canis familiaris)
Mammalia ANKRD33 35
  • 82.29 (n)
  • 80.4 (a)
ANKRD33 36
  • 78 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Ankrd33 35
  • 79.08 (n)
  • 77.45 (a)
Ankrd33 16
Ankrd33 36
  • 68 (a)
OneToOne
chicken
(Gallus gallus)
Aves ANKRD33 35
  • 58.31 (n)
  • 51.59 (a)
lizard
(Anolis carolinensis)
Reptilia ANKRD33 36
  • 37 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii ankrd33aa 36
  • 31 (a)
OneToMany
ankrd33ab 36
  • 32 (a)
OneToMany
LOC569518 35
  • 49.11 (n)
  • 41.69 (a)
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 21 (a)
OneToMany
Species with no ortholog for ANKRD33:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ANKRD33 Gene

ENSEMBL:
Gene Tree for ANKRD33 (if available)
TreeFam:
Gene Tree for ANKRD33 (if available)

Paralogs for ANKRD33 Gene

Paralogs for ANKRD33 Gene

Selected SIMAP similar genes for ANKRD33 Gene using alignment to 3 proteins:

genes like me logo Genes that share paralogs with ANKRD33: view

Variants for ANKRD33 Gene

Sequence variations from dbSNP and Humsavar for ANKRD33 Gene

SNP ID Clin Chr 12 pos Sequence Context AA Info Type MAF
rs697632 -- 51,887,962(+) AGCAT(C/T)TCCGC upstream-variant-2KB
rs697633 -- 51,888,136(+) CCCCA(A/G)TCCCA utr-variant-5-prime, upstream-variant-2KB
rs697634 -- 51,888,276(+) CTCCG(C/T)GGAGC utr-variant-5-prime, reference, synonymous-codon, upstream-variant-2KB
rs697635 -- 51,888,964(-) AACCC(C/T)GTGAA intron-variant
rs697636 - 51,889,089(+) ATGCT(A/T)CCACG reference, missense, intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ANKRD33 Gene

Variant ID Type Subtype PubMed ID
nsv826373 CNV Gain 20364138

Relevant External Links for ANKRD33 Gene

HapMap Linkage Disequilibrium report
ANKRD33

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ANKRD33 Gene

Disorders for ANKRD33 Gene

Relevant External Links for ANKRD33

Genetic Association Database (GAD)
ANKRD33
genes like me logo Genes that share disorders with ANKRD33: view

No data available for UniProtKB/Swiss-Prot for ANKRD33 Gene

Publications for ANKRD33 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  2. The finished DNA sequence of human chromosome 12. (PMID: 16541075) Scherer S.E. … Gibbs R.A. (Nature 2006) 3 4
  3. Panky, a novel photoreceptor-specific ankyrin repeat protein, is a transcriptional cofactor that suppresses CRX-regulated photoreceptor genes. (PMID: 20026326) Sanuki R. … Furukawa T. (FEBS Lett. 2010) 2 3
  4. Genome-wide pharmacogenomic study of neurocognition as an indicator of antipsychotic treatment response in schizophrenia. (PMID: 21107309) McClay J.L. … van den Oord E.J. (Neuropsychopharmacology 2011) 3
  5. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4

Products for ANKRD33 Gene

Sources for ANKRD33 Gene

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