Free for academic non-profit institutions. Other users need a Commercial license

Aliases for ANKRD30BP2 Gene

Aliases for ANKRD30BP2 Gene

  • Ankyrin Repeat Domain 30B Pseudogene 2 2 3
  • Cancer/Testis Antigen 85 2 3
  • Ankyrin Repeat Domain 30A Pseudogene 3
  • Chromosome 21 Open Reading Frame 99 2
  • Cancer-Testis SP-1 3
  • C21orf99 3
  • CTSP-1 3
  • CTSP1 3
  • CT85 3

External Ids for ANKRD30BP2 Gene

Previous HGNC Symbols for ANKRD30BP2 Gene

  • C21orf99

Previous GeneCards Identifiers for ANKRD30BP2 Gene

  • GC21P014412
  • GC21P014416

Summaries for ANKRD30BP2 Gene

GeneCards Summary for ANKRD30BP2 Gene

ANKRD30BP2 (Ankyrin Repeat Domain 30B Pseudogene 2) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ANKRD30BP2 Gene

Genomics for ANKRD30BP2 Gene

Genomic Location for ANKRD30BP2 Gene

Start:
13,038,160 bp from pter
End:
13,118,251 bp from pter
Size:
80,092 bases
Orientation:
Plus strand

Genomic View for ANKRD30BP2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ANKRD30BP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ANKRD30BP2 Gene

No data available for Regulatory Elements for ANKRD30BP2 Gene

Proteins for ANKRD30BP2 Gene

Post-translational modifications for ANKRD30BP2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ANKRD30BP2 Gene

Domains for ANKRD30BP2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ANKRD30BP2 Gene

Function for ANKRD30BP2 Gene

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate ANKRD30BP2
    • Block miRNA regulation of ANKRD30BP2 using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for ANKRD30BP2

    In Situ Assay Products

    Flow Cytometry Products

    No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ANKRD30BP2 Gene

    Localization for ANKRD30BP2 Gene

    No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ANKRD30BP2 Gene

    Pathways for ANKRD30BP2 Gene

    SuperPathways for ANKRD30BP2 Gene

    No Data Available

    Interacting Proteins for ANKRD30BP2 Gene

    Gene Ontology (GO) - Biological Process for ANKRD30BP2 Gene

    None

    No data available for Pathways by source for ANKRD30BP2 Gene

    Transcripts for ANKRD30BP2 Gene

    mRNA/cDNA for ANKRD30BP2 Gene

    Unigene Clusters for ANKRD30BP2 Gene

    Ankyrin repeat domain 30B pseudogene 2:
    Representative Sequences:

    miRNA Products

    • QIAGEN qRT-PCR Assays for microRNAs that regulate ANKRD30BP2
      • Block miRNA regulation of ANKRD30BP2 using miScript Target Protectors

      Inhibitory RNA Products

      • Predesigned siRNA for gene silencing in human,mouse,rat for ANKRD30BP2

      Primer Products

      • QuantiTect SYBR Green Assays in human,mouse,rat
      • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
      • QuantiFast Probe-based Assays in human,mouse,rat

      Flow Cytometry Products

      Alternative Splicing Database (ASD) splice patterns (SP) for ANKRD30BP2 Gene

      No ASD Table

      Relevant External Links for ANKRD30BP2 Gene

      GeneLoc Exon Structure for
      ANKRD30BP2
      ECgene alternative splicing isoforms for
      ANKRD30BP2

      Expression for ANKRD30BP2 Gene

      mRNA expression in normal human tissues for ANKRD30BP2 Gene

      mRNA differential expression in normal tissues according to GTEx for ANKRD30BP2 Gene

      This gene is overexpressed in Testis (51.2).

      SOURCE GeneReport for Unigene cluster for ANKRD30BP2 Gene Hs.558645

      genes like me logo Genes that share expressions with ANKRD30BP2: view

      In Situ Assay Products

      No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for ANKRD30BP2 Gene

      Orthologs for ANKRD30BP2 Gene

      Evolution for ANKRD30BP2 Gene

      ENSEMBL:
      Gene Tree for ANKRD30BP2 (if available)
      TreeFam:
      Gene Tree for ANKRD30BP2 (if available)

      No data available for Orthologs for ANKRD30BP2 Gene

      Paralogs for ANKRD30BP2 Gene

      No data available for Paralogs for ANKRD30BP2 Gene

      Variants for ANKRD30BP2 Gene

      Sequence variations from dbSNP and Humsavar for ANKRD30BP2 Gene

      SNP ID Clin Chr 21 pos Sequence Context AA Info Type MAF
      rs11621 -- 13,051,952(+) CAAGA(G/T)GGGGG nc-transcript-variant
      rs239278 -- 13,072,800(+) tatat(G/T)taaaa intron-variant
      rs239282 -- 13,039,750(+) ttgca(C/G)tgagc intron-variant
      rs239283 -- 13,048,299(+) AACAT(G/T)TTTTT intron-variant
      rs239284 -- 13,048,329(+) GAATT(A/T)AATTT intron-variant

      Structural Variations from Database of Genomic Variants (DGV) for ANKRD30BP2 Gene

      Variant ID Type Subtype PubMed ID
      nsv834042 CNV Gain 17160897
      esv2751923 CNV Loss 17911159
      nsv913340 CNV Loss 21882294
      nsv436344 CNV Deletion 17901297
      esv273458 CNV Insertion 20981092
      esv992515 CNV Insertion 20482838
      dgv1351e1 CNV Complex 17122850
      nsv9841 CNV Loss 18304495
      esv2666923 CNV Deletion 23128226
      nsv913341 CNV Gain 21882294
      dgv4667n71 CNV Gain+Loss 21882294
      esv2421799 CNV Deletion 20811451
      nsv442784 CNV CNV 18776908
      nsv913344 CNV Gain 21882294
      nsv913345 CNV Gain 21882294
      nsv913346 CNV Gain+Loss 21882294
      nsv913347 CNV Gain 21882294
      nsv913348 CNV Gain+Loss 21882294

      Relevant External Links for ANKRD30BP2 Gene

      HapMap Linkage Disequilibrium report
      ANKRD30BP2

      No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ANKRD30BP2 Gene

      Disorders for ANKRD30BP2 Gene

      No disorders were found for ANKRD30BP2 Gene.

      No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for ANKRD30BP2 Gene

      Publications for ANKRD30BP2 Gene

      1. Nineteen additional unpredicted transcripts from human chromosome 21. (PMID: 12036297) Reymond A. … Antonarakis S.E. (Genomics 2002) 2 3
      2. Characterization of a cancer/testis (CT) antigen gene family capable of eliciting humoral response in cancer patients. (PMID: 17114284) Parmigiani R.B. … Camargo A.A. (Proc. Natl. Acad. Sci. U.S.A. 2006) 2 3
      3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
      4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3

      Products for ANKRD30BP2 Gene

      Sources for ANKRD30BP2 Gene

      Back to Top

      Content