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Aliases for ANKRD30BP2 Gene

Aliases for ANKRD30BP2 Gene

  • Ankyrin Repeat Domain 30B Pseudogene 2 2 3 5
  • Cancer/Testis Antigen 85 2 3
  • Ankyrin Repeat Domain 30A Pseudogene 3
  • Chromosome 21 Open Reading Frame 99 2
  • Cancer-Testis SP-1 3
  • C21orf99 3
  • CTSP-1 3
  • CTSP1 3
  • CT85 3

External Ids for ANKRD30BP2 Gene

Previous HGNC Symbols for ANKRD30BP2 Gene

  • C21orf99

Previous GeneCards Identifiers for ANKRD30BP2 Gene

  • GC21P014412
  • GC21P014416

Summaries for ANKRD30BP2 Gene

GeneCards Summary for ANKRD30BP2 Gene

ANKRD30BP2 (Ankyrin Repeat Domain 30B Pseudogene 2) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ANKRD30BP2 Gene

Genomics for ANKRD30BP2 Gene

Genomic Location for ANKRD30BP2 Gene

Chromosome:
21
Start:
13,038,160 bp from pter
End:
13,118,251 bp from pter
Size:
80,092 bases
Orientation:
Plus strand

Genomic View for ANKRD30BP2 Gene

Genes around ANKRD30BP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ANKRD30BP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ANKRD30BP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ANKRD30BP2 Gene

No data available for Regulatory Elements for ANKRD30BP2 Gene

Proteins for ANKRD30BP2 Gene

Post-translational modifications for ANKRD30BP2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ANKRD30BP2 Gene

Domains & Families for ANKRD30BP2 Gene

Suggested Antigen Peptide Sequences for ANKRD30BP2 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for ANKRD30BP2 Gene

Function for ANKRD30BP2 Gene

Phenotypes for ANKRD30BP2 Gene

GenomeRNAi human phenotypes for ANKRD30BP2:
genes like me logo Genes that share phenotypes with ANKRD30BP2: view

Animal Model Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ANKRD30BP2 Gene

Localization for ANKRD30BP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ANKRD30BP2 Gene

Pathways & Interactions for ANKRD30BP2 Gene

SuperPathways for ANKRD30BP2 Gene

No Data Available

Interacting Proteins for ANKRD30BP2 Gene

Gene Ontology (GO) - Biological Process for ANKRD30BP2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ANKRD30BP2 Gene

Transcripts for ANKRD30BP2 Gene

mRNA/cDNA for ANKRD30BP2 Gene

(1) REFSEQ mRNAs :
(11) Additional mRNA sequences :
(20) Selected AceView cDNA sequences:
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ANKRD30BP2 Gene

Ankyrin repeat domain 30B pseudogene 2:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ANKRD30BP2 Gene

No ASD Table

Relevant External Links for ANKRD30BP2 Gene

GeneLoc Exon Structure for
ANKRD30BP2
ECgene alternative splicing isoforms for
ANKRD30BP2

Expression for ANKRD30BP2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ANKRD30BP2 Gene

mRNA differential expression in normal tissues according to GTEx for ANKRD30BP2 Gene

This gene is overexpressed in Testis (x51.2).

NURSA nuclear receptor signaling pathways regulating expression of ANKRD30BP2 Gene:

ANKRD30BP2

SOURCE GeneReport for Unigene cluster for ANKRD30BP2 Gene:

Hs.558645
genes like me logo Genes that share expression patterns with ANKRD30BP2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for ANKRD30BP2 Gene

Orthologs for ANKRD30BP2 Gene

Evolution for ANKRD30BP2 Gene

ENSEMBL:
Gene Tree for ANKRD30BP2 (if available)
TreeFam:
Gene Tree for ANKRD30BP2 (if available)

No data available for Orthologs for ANKRD30BP2 Gene

Paralogs for ANKRD30BP2 Gene

No data available for Paralogs for ANKRD30BP2 Gene

Variants for ANKRD30BP2 Gene

Sequence variations from dbSNP and Humsavar for ANKRD30BP2 Gene

SNP ID Clin Chr 21 pos Sequence Context AA Info Type
rs10211936 -- 13,058,471(+) tttaa(A/G)ctggt intron-variant
rs10211966 -- 13,058,436(+) caaag(A/T)tcttc intron-variant
rs10432802 -- 13,036,178(+) CCTCC(A/G)GGATG upstream-variant-2KB
rs10432803 -- 13,037,395(+) TGCAG(C/G)ATCGT upstream-variant-2KB
rs10432804 -- 13,039,786(+) CTGGG(C/T)GACAG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ANKRD30BP2 Gene

Variant ID Type Subtype PubMed ID
nsv9841 CNV loss 18304495
nsv979549 CNV duplication 23825009
nsv964505 CNV duplication 23825009
nsv964475 CNV duplication 23825009
nsv953334 CNV duplication 24416366
nsv834042 CNV gain 17160897
nsv586989 CNV loss 21841781
nsv586987 CNV gain 21841781
nsv586986 CNV gain 21841781
nsv586984 CNV gain+loss 21841781
nsv442784 CNV loss 18776908
nsv436344 CNV deletion 17901297
nsv1160697 OTHER complex 26073780
nsv1160695 CNV deletion 26073780
nsv1160694 CNV duplication 26073780
nsv1150540 CNV duplication 26484159
nsv1146610 CNV duplication 26484159
nsv1140337 OTHER inversion 24896259
nsv1133522 CNV deletion 24896259
nsv1133521 CNV deletion 24896259
nsv1132556 CNV duplication 24896259
nsv1127875 CNV deletion 24896259
nsv1117303 CNV tandem duplication 24896259
nsv1115611 CNV duplication 24896259
nsv1078499 CNV duplication 25765185
nsv1077921 CNV duplication 25765185
nsv1072589 CNV deletion 25765185
nsv1072588 CNV deletion 25765185
nsv1072162 CNV deletion 25765185
nsv1067370 CNV gain+loss 25217958
nsv1058054 CNV gain 25217958
nsv1056208 CNV gain+loss 25217958
esv992515 CNV insertion 20482838
esv3893362 CNV gain 25118596
esv3584773 CNV loss 24956385
esv3347351 CNV insertion 20981092
esv2758809 CNV gain+loss 17122850
esv2751923 CNV loss 17911159
esv2666923 CNV deletion 23128226
esv2421799 CNV deletion 20811451
dgv93e203 CNV gain+loss 21179565
dgv7751n54 CNV gain 21841781
dgv4380n100 CNV loss 25217958
dgv4379n100 CNV loss 25217958
dgv4378n100 CNV gain 25217958
dgv4377n100 CNV gain 25217958
dgv4376n100 CNV gain 25217958
dgv4375n100 CNV loss 25217958
dgv4374n100 CNV gain 25217958
dgv165n111 CNV deletion 26073780

Relevant External Links for ANKRD30BP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ANKRD30BP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ANKRD30BP2 Gene

Disorders for ANKRD30BP2 Gene

Relevant External Links for ANKRD30BP2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ANKRD30BP2

No disorders were found for ANKRD30BP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ANKRD30BP2 Gene

Publications for ANKRD30BP2 Gene

  1. Characterization of a cancer/testis (CT) antigen gene family capable of eliciting humoral response in cancer patients. (PMID: 17114284) Parmigiani R.B. … Camargo A.A. (Proc. Natl. Acad. Sci. U.S.A. 2006) 2 3 64
  2. Nineteen additional unpredicted transcripts from human chromosome 21. (PMID: 12036297) Reymond A. … Antonarakis S.E. (Genomics 2002) 2 3 64
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 64
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for ANKRD30BP2 Gene

Sources for ANKRD30BP2 Gene

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