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Aliases for ANKRD30BL Gene

Aliases for ANKRD30BL Gene

  • Ankyrin Repeat Domain 30B-Like 2 3 5
  • Ankyrin Repeat Domain 30B Pseudogene 3 2 3
  • NCRNA00164 3 4
  • Non-Protein Coding RNA 164 2
  • ANKRD30BP3 3

External Ids for ANKRD30BL Gene

Previous HGNC Symbols for ANKRD30BL Gene

  • NCRNA00164
  • ANKRD30BP3

Previous GeneCards Identifiers for ANKRD30BL Gene

  • GC02M132906
  • GC02M124898
  • GC02M132281
  • GC02M132321

Summaries for ANKRD30BL Gene

GeneCards Summary for ANKRD30BL Gene

ANKRD30BL (Ankyrin Repeat Domain 30B-Like) is a Protein Coding gene. An important paralog of this gene is ANKRD18A.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ANKRD30BL Gene

Genomics for ANKRD30BL Gene

Regulatory Elements for ANKRD30BL Gene

Enhancers for ANKRD30BL Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around ANKRD30BL on UCSC Golden Path with GeneCards custom track

Genomic Location for ANKRD30BL Gene

Chromosome:
2
Start:
132,147,591 bp from pter
End:
132,257,969 bp from pter
Size:
110,379 bases
Orientation:
Minus strand

Genomic View for ANKRD30BL Gene

Genes around ANKRD30BL on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ANKRD30BL Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ANKRD30BL Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ANKRD30BL Gene

Proteins for ANKRD30BL Gene

  • Protein details for ANKRD30BL Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A7E2S9-A30BL_HUMAN
    Recommended name:
    Putative ankyrin repeat domain-containing protein 30B-like
    Protein Accession:
    A7E2S9
    Secondary Accessions:
    • B8ZZL7

    Protein attributes for ANKRD30BL Gene

    Size:
    258 amino acids
    Molecular mass:
    28549 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for ANKRD30BL Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ANKRD30BL Gene

Proteomics data for ANKRD30BL Gene at MOPED

Post-translational modifications for ANKRD30BL Gene

No Post-translational modifications

Other Protein References for ANKRD30BL Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for ANKRD30BL Gene

Domains & Families for ANKRD30BL Gene

Gene Families for ANKRD30BL Gene

Protein Domains for ANKRD30BL Gene

Suggested Antigen Peptide Sequences for ANKRD30BL Gene

Graphical View of Domain Structure for InterPro Entry

A7E2S9

UniProtKB/Swiss-Prot:

A30BL_HUMAN :
  • Contains 4 ANK repeats.
Similarity:
  • Contains 4 ANK repeats.
genes like me logo Genes that share domains with ANKRD30BL: view

Function for ANKRD30BL Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ANKRD30BL Gene

Localization for ANKRD30BL Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ANKRD30BL Gene COMPARTMENTS Subcellular localization image for ANKRD30BL gene
Compartment Confidence
cytosol 2
nucleus 2
extracellular 1
mitochondrion 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for ANKRD30BL Gene

Pathways & Interactions for ANKRD30BL Gene

SuperPathways for ANKRD30BL Gene

No Data Available

Interacting Proteins for ANKRD30BL Gene

Gene Ontology (GO) - Biological Process for ANKRD30BL Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ANKRD30BL Gene

Drugs & Compounds for ANKRD30BL Gene

No Compound Related Data Available

Transcripts for ANKRD30BL Gene

mRNA/cDNA for ANKRD30BL Gene

(5) Additional mRNA sequences :
(6) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ANKRD30BL Gene

Ankyrin repeat domain 30B-like:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ANKRD30BL Gene

No ASD Table

Relevant External Links for ANKRD30BL Gene

GeneLoc Exon Structure for
ANKRD30BL
ECgene alternative splicing isoforms for
ANKRD30BL

Expression for ANKRD30BL Gene

mRNA expression in normal human tissues for ANKRD30BL Gene

mRNA differential expression in normal tissues according to GTEx for ANKRD30BL Gene

This gene is overexpressed in Testis (x20.0).

Protein differential expression in normal tissues from HIPED for ANKRD30BL Gene

This gene is overexpressed in Peripheral blood mononuclear cells (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for ANKRD30BL Gene



SOURCE GeneReport for Unigene cluster for ANKRD30BL Gene Hs.380689

genes like me logo Genes that share expression patterns with ANKRD30BL: view

Protein tissue co-expression partners for ANKRD30BL Gene

- Elite partner

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for ANKRD30BL Gene

Orthologs for ANKRD30BL Gene

This gene was present in the common ancestor of chordates.

Orthologs for ANKRD30BL Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia -- 36
OneToMany
dog
(Canis familiaris)
Mammalia -- 36
  • 4 (a)
ManyToMany
-- 36
  • 39 (a)
ManyToMany
-- 36
  • 10 (a)
ManyToMany
-- 36
  • 4 (a)
ManyToMany
-- 36
ManyToMany
-- 36
ManyToMany
-- 36
  • 37 (a)
ManyToMany
-- 36
  • 41 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Gm1758 36
  • 31 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 36
  • 3 (a)
OneToMany
chimpanzee
(Pan troglodytes)
Mammalia ANKRD30BL 36
  • 77 (a)
OneToOne
chicken
(Gallus gallus)
Aves -- 36
  • 6 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia -- 36
  • 32 (a)
ManyToMany
zebrafish
(Danio rerio)
Actinopterygii ANKRD7 36
  • 3 (a)
OneToMany
Species with no ortholog for ANKRD30BL:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ANKRD30BL Gene

ENSEMBL:
Gene Tree for ANKRD30BL (if available)
TreeFam:
Gene Tree for ANKRD30BL (if available)

Paralogs for ANKRD30BL Gene

genes like me logo Genes that share paralogs with ANKRD30BL: view

Variants for ANKRD30BL Gene

Sequence variations from dbSNP and Humsavar for ANKRD30BL Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs435560 -- 132,259,305(-) ATTTA(C/T)TCAGg upstream-variant-2KB
rs1708848 -- 132,249,073(-) TGTGT(A/G/T)CATTC intron-variant
rs1814883 -- 132,204,467(-) ACATA(C/T)ATACA intron-variant
rs1814884 -- 132,204,459(-) acata(C/T)acact intron-variant
rs1818636 -- 132,205,432(-) tagag(A/G)tgggg intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ANKRD30BL Gene

Variant ID Type Subtype PubMed ID
dgv1247e1 CNV Complex 17122850
essv1836 CNV CNV 17122850
essv4862 CNV CNV 17122850
nsv875123 CNV Gain 21882294
dgv1261e1 CNV Complex 17122850
essv21727 CNV CNV 17122850
nsv875126 CNV Gain 21882294
nsv526029 CNV Gain 19592680
nsv875129 CNV Loss 21882294
esv32851 CNV Gain+Loss 17666407
esv2448107 CNV Loss 19546169
essv899 CNV CNV 17122850
nsv875130 CNV Loss 21882294
dgv4315n71 CNV Gain 21882294
nsv875133 CNV Gain 21882294
esv25933 CNV Gain 19812545
essv1359 CNV CNV 17122850
nsv10190 CNV Gain 18304495
nsv10191 CNV Gain+Loss 18304495
esv2720798 CNV Deletion 23290073
esv2720799 CNV Deletion 23290073
nsv819534 CNV Insertion 19587683
esv2511278 CNV Gain 19546169
esv2657667 CNV Deletion 23128226
esv2513311 CNV Gain 19546169
esv2720800 CNV Deletion 23290073
dgv660e201 CNV Deletion 23290073
esv2720801 CNV Deletion 23290073
esv2720802 CNV Deletion 23290073
esv2720803 CNV Deletion 23290073
esv2720804 CNV Deletion 23290073
nsv820317 CNV Duplication 20802225
nsv821716 CNV Gain 20364138
esv2466772 CNV Gain 19546169
esv2720805 CNV Deletion 23290073
dgv666n67 CNV Gain 20364138
nsv2928 CNV Insertion 18451855
esv2583265 CNV Gain 19546169
nsv819671 CNV Gain 19587683

Variation tolerance for ANKRD30BL Gene

Gene Damage Index Score: 2.38; 42.20% of all genes are more intolerant (likely to be disease-causing)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Relevant External Links for ANKRD30BL Gene

Disorders for ANKRD30BL Gene

Relevant External Links for ANKRD30BL

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ANKRD30BL

No disorders were found for ANKRD30BL Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ANKRD30BL Gene

Publications for ANKRD30BL Gene

  1. Characterization of a cancer/testis (CT) antigen gene family capable of eliciting humoral response in cancer patients. (PMID: 17114284) Parmigiani R.B. … Camargo A.A. (Proc. Natl. Acad. Sci. U.S.A. 2006) 2 3 67
  2. A transcript finishing initiative for closing gaps in the human transcriptome. (PMID: 15197164) Sogayar M.C. … Zanette D.L. (Genome Res. 2004) 3
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for ANKRD30BL Gene

Sources for ANKRD30BL Gene

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