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Category Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21

GIFtS
-

ANKRD30BL Gene

protein-coding GIFtS: 30
GCID: GC02M132906

ankyrin repeat domain 30B-like

(Previous names: non-protein coding RNA 164, ankyrin repeat domain 30B pseudogene...)
(Previous symbols: NCRNA00164, ANKRD30BP3)

Search for ANKRD30BL
in

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Human Malady Compendium

(According to ¹HGNC, ²Entrez Gene,
³UniProtKB/Swiss-Prot, ⁴UniProtKB/TrEMBL, ⁵OMIM, ⁶GeneLoc, ⁷Ensembl, ⁸DME, ⁹miRBase, and/or ¹⁰fRNAdb)
About This Section

This gene clusters with an RNA gene
Subcategory (RNA class): lncRNA

Quality score for the ORGUL clustered with this gene is 3

Aliases
Ankyrin Repeat Domain 30B-Like¹ ²
NCRNA00164¹ ² ³
ANKRD30BP3¹ ²
Ankyrin Repeat Domain 30B Pseudogene 3¹
Non-Protein Coding RNA 164¹

External Ids:	HGNC: 35167¹	Entrez Gene: 554226²	Ensembl: ENSG00000163046⁷	UniProtKB: A7E2S9³

ORGUL members:
	NONCODE:n383749

Export aliases for ANKRD30BL gene to outside databases

Previous GC identifer: GC02M124898

(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section

RefSeq DNA sequence:

NC_000002.11 NC_018913.1 NT_022135.16

Regulatory elements:

Search SABiosciences Regulatory transcription factor binding sites for ANKRD30BL
Other transcription factors

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Epigenetics:

QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat ANKRD30BL

Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 2q21.2 Ensembl cytogenetic band: 2q21.2 HGNC cytogenetic band: 2q21.2

ANKRD30BL Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
ANKRD30BL gene location

GeneLoc information about chromosome 2 GeneLoc Exon Structure

GeneLoc location for GC02M132906: view genomic region (about GC identifiers)

Start:	132,905,164 bp from pter	End:	133,015,542 bp from pter
Size:	110,379 bases	Orientation:	minus strand

(According to ¹UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to ²PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
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About This Section

UniProtKB/Swiss-Prot: A30BL_HUMAN, A7E2S9 (See protein sequence)

Recommended Name: Putative ankyrin repeat domain-containing protein 30B-like

Size: 258 amino acids; 28549 Da

Secondary accessions: B8ZZL7

Alternative splicing: 2 isoforms: A7E2S9-1 A7E2S9-2 (No experimental confirmation available. May be produced at very low levels due to a premature stop codon in the mRNA, leading to nonsense-mediated mRNA decay)

Explore the universe of human proteins at neXtProt for ANKRD30BL: NX_A7E2S9

Post-translational modifications:

View modification sites using PhosphoSitePlus²

View neXtProt modification sites for NX_A7E2S9

ANKRD30BL Protein expression data from MOPED and PaxDb: About this image

ENSEMBL proteins:

ENSP00000386398 ENSP00000295181

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(According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
About This Section

ANKRD30BL for domains About GeneDecksing

2 InterPro domains/families:

IPR020683 Ankyrin_rpt-contain_dom

IPR002110 Ankyrin_rpt

Graphical View of Domain Structure for InterPro Entry A7E2S9

ProtoNet protein and cluster: A7E2S9

UniProtKB/Swiss-Prot: A30BL_HUMAN, A7E2S9

Similarity: Contains 4 ANK repeats

(According to ¹UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or ²DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
About This Section

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(Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to ¹UniProtKB, ²MINT, ³I2D, and/or ⁴STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
About This Section

Interactions:

Search SABiosciences Gene Network Central^TM Interacting Genes and Proteins Networks for ANKRD30BL

(Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
About This Section

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Search CenterWatch for drugs/clinical trials and news about ANKRD30BL / A30BL

(Secondary structures according to fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
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About This Section

Unigene Cluster for ANKRD30BL:

Ankyrin repeat domain 30B-like

Hs.380689 [show with all ESTs]

Unigene Representative Sequence: NR_027019

6 Ensembl transcripts including schematic representations, and UCSC links where relevant:

ENST00000465868 ENST00000470729(uc002ttj.3) ENST00000481691 ENST00000409867

ENST00000295181(uc002tti.3) ENST00000471048

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Additional cDNA sequence:

BC029821.1 BC045801.1 BC057764.1 NR_027019.1 NR_027020.2

6 DOTS entries:

DT.101956601 DT.120959299 DT.95296205 DT.87003491 DT.120785592 DT.121142433

GeneLoc Exon Structure

(RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section

ANKRD30BL expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS
CGAP TAG: --

About this image
See ANKRD30BL Protein Expression from SPIRE MOPED and PaxDB
Genevestigator expression for ANKRD30BL

SOURCE GeneReport for Unigene cluster: Hs.380689

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(Orthologs according to ^1,2HomoloGene (²older version, for species not in ¹newer version), ³euGenes, ⁴SGD , ⁵MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or ⁶Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
About This Section

This gene was present in the common ancestor of chordates.

Orthologs for ANKRD30BL gene from 3/7 species (see all 7) About this table

Organism	Taxonomic classification	Gene	Description	Human Similarity	Orthology Type	Details
chicken (Gallus gallus)	Aves	ANKRD62⁶	Uncharacterized protein	9(a)	1 → many	1(26091172-26138404)
lizard (Anolis carolinensis)	Reptilia	ANKRD62⁶	--	31(a)	1 → many	GL344195.1(39104-48393)
zebrafish (Danio rerio)	Actinopterygii	si:ch211-272n13.3⁶	si:ch211-272n13.3	3(a)	1 → many	25(3581527-3655709)

ENSEMBL Gene Tree for ANKRD30BL (if available)
TreeFam Gene Tree for ANKRD30BL (if available)

(Paralogs according to ¹HomoloGene,
²Ensembl, and ³SIMAP, Pseudogenes according to ⁴Pseudogene.org Build 68)
About This Section

Paralogs for ANKRD30BL gene

POTEF² POTEI² ANKRD30A² ANKRD36² ANKRD7² POTEB² ANKRD20A3² POTEH²

ENSG00000155282² ANKRD30B² ENSG00000266302² ANKRD36C² POTEJ² POTEC² ANKRD20A2² POTEG²

ANKRD26² ANKRD62² ANKRD18A² ENSG00000188219² POTEM² ANKRD20A1² LOC100996331² CCDC144A²

POTED² ANKRD20A4² ANKRD18B² LOC100288966²

18/29 SIMAP similar genes for ANKRD30BL using alignment to 1 protein entry: A30BL_HUMAN(see all similar genes):

ANKRD20A1 ANKRD20A2 ANKRD20A4 ANKRD20A8P ANKRD20A5P ANKRD7

ANKRD18B ANKRD19P ANKRD18A ANKRD36B ANKRD62 MGC26718

POTEA ANKRD36 POTEC POTED POTEE POTEG

ANKRD30BL for paralogs About GeneDecksing

5/6 Pseudogenes.org Pseudogenes for ANKRD30BL (see all 6)
PGOHUM00000238379 PGOHUM00000258512 PGOHUM00000238764 PGOHUM00000250120 PGOHUM00000256748

(SNPs/Variants according to the ¹NCBI SNP Database, ²Ensembl, ³PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
About This Section

SNP ID	Valid	Clinical significance	Chr 2 pos	Sequence	#	AA Chg	Type	More	#	Allele freq	Pop	Total sample	More
Genomic Data					Transcription Related Data				Allele Frequencies
				--	--	--		--	--
rs143835542^1,2		--	132904671(+)	`GAGGAC/TACAGT`	2	--	int¹		0	--	--	--	--
rs7584150^1,2	C,F,A,H,	--	132904677(+)	`ACAGTA/GAATTC`	2	--	int¹		9		NS EA WA NA	778
rs181532594^1,2		--	132904687(+)	`CCTCTC/TCAAAG`	2	--	int¹		0	--	--	--	--
rs10190450^1,2	C	--	132904819(+)	`TCAACC/TTCCAG`	2	--	int¹		0	--	--	--	--
rs28749278^1,2		--	132904992(+)	`AGTTGA/TGTCTT`	2	--	int¹		0	--	--	--	--
rs10928258^1,2	A,	--	132905041(+)	`GGTGCA/GCCTCC`	2	--	int¹		0	--	--	--	--
rs10928259^1,2	A	--	132905073(+)	`TCCCCC/TAGAGG`	2	--	int¹		0	--	--	--	--
rs10928260^1,2	A	--	132905091(+)	`GAATGC/TTGGGT`	2	--	int¹		0	--	--	--	--
rs115505135^1,2	C,F,	--	132905099(+)	`GGTGGG/TCCCTT`	2	--	int¹		1		WA	118
rs10928261^1,2	A	--	132905104(+)	`GCCCTC/TAAATT`	2	--	int¹		0	--	--	--	--

HapMap Linkage Disequilibrium report for ANKRD30BL (132905164 - 133015542 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
Database of Genomic Variants (DGV) variations for ANKRD30BL: --

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(in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
About This Section

(in PubMed. Associations of this gene to articles via ¹Entrez Gene, ²UniProtKB/Swiss-Prot, ³HGNC, ⁴GAD, ⁵PharmGKB, ⁶HMDB, ⁷DrugBank, ⁸UniProtKB/TrEMBL, ⁹ Novoseek, and/or ¹⁰fRNAdb)
About This Section

PubMed articles for ANKRD30BL gene integrated from 9 sources:
(articles sorted by number of sources associating them with ANKRD30BL)

Utopia: connect your pdf to the dynamic
world of online information

Characterization of a cancer/testis (CT) antigen gene family capable of eliciting humoral response in cancer patients. (PubMed id 17114284)^{1, 3} Parmigiani R.B....Camargo A.A. (2006)
Generation and annotation of the DNA sequences of human chromosomes 2 and 4. (PubMed id 15815621)² Hillier L.W....Wilson R.K. (2005)
A transcript finishing initiative for closing gaps in the human transcriptome. (PubMed id 15197164)¹ Sogayar M.C....Zanette D.L. (2004)
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)² Gerhard D.S....Malek J. (2004)
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932)¹ Strausberg R.L....Marra M.A. (2002)

(in PubMed, OMIM, and NCBI Bookshelf)
About This Section

		AND	OR
Aliases
Free Text

Query String		PubMed OMIM NCBI Bookshelf
	(Note: In FireFox, select the above section and copy using Ctrl-C)

(According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
About This Section

Entrez Gene: 554226	HGNC: 35167	Ensembl:ENSG00000163046	euGenes: HUgn554226	ECgene: ANKRD30BL
H-InvDB: ANKRD30BL

(According to HUGE)
About This Section

(According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section

Intellectual Property for ANKRD30BL gene
(Patent information from GeneIP, Licensable technologies from WIS Yeda, Salk, Tufts, IP news from LifeMap Sciences, Inc.)

About This Section

Patent Information for ANKRD30BL gene:
Search GeneIP for patents involving ANKRD30BL

GeneCards and IP:
Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search

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Category			VWF (GIFTS: 73) von Willebrand factor
GIFtS Group

The GeneCards human gene database gene index: 1 3 5 6 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

The GeneCards Human Gene Database

Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

Hot genes Disease genes ANKRD30BL gene at Home site.

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ANKRD30BL Gene

ankyrin repeat domain 30B-like

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for ANKRD30BL gene

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ANKRD30BL Gene

ankyrin repeat domain 30B-like

Aliasesfor ANKRD30BL gene

Summariesfor ANKRD30BL gene

Genomic Viewsfor ANKRD30BL gene

Proteinsfor ANKRD30BL gene

Protein Domains /Familiesfor ANKRD30BL gene

Functionfor ANKRD30BL gene

Pathways & Interactionsfor ANKRD30BL gene

Drugs & Compoundsfor ANKRD30BL gene

Transcriptsfor ANKRD30BL gene

Expression for ANKRD30BL gene

Orthologsfor ANKRD30BL gene

Paralogsfor ANKRD30BL gene

Genomic Variantsfor ANKRD30BL gene

Disorders / Diseasesfor ANKRD30BL gene

Publicationsfor ANKRD30BL gene

External Searches for ANKRD30BL gene

Genome Databases showing ANKRD30BL gene

Other Databases showing ANKRD30BL gene

Specialized Databases showing ANKRD30BL gene

Intellectual Propertyfor ANKRD30BL gene

Productsfor ANKRD30BL gene

View Random Gene

Aliases
for ANKRD30BL gene

Summaries
for ANKRD30BL gene

Genomic Views
for ANKRD30BL gene

Proteins
for ANKRD30BL gene

Protein Domains /
Families
for ANKRD30BL gene

Function
for ANKRD30BL gene

Pathways & Interactions
for ANKRD30BL gene

Drugs & Compounds
for ANKRD30BL gene

Transcripts
for ANKRD30BL gene

Expression
for ANKRD30BL gene

Orthologs
for ANKRD30BL gene

Paralogs
for ANKRD30BL gene

Genomic Variants
for ANKRD30BL gene

Disorders / Diseases
for ANKRD30BL gene

Publications
for ANKRD30BL gene

Intellectual Property
for ANKRD30BL gene

Products
for ANKRD30BL gene