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Aliases for ANKRD26P3 Gene

Aliases for ANKRD26P3 Gene

  • Ankyrin Repeat Domain 26 Pseudogene 3 2 3 5
  • Long Intergenic Non-Protein Coding RNA 414 2 3
  • LINC00414 3

External Ids for ANKRD26P3 Gene

Previous HGNC Symbols for ANKRD26P3 Gene

  • LINC00414

Previous GeneCards Identifiers for ANKRD26P3 Gene

  • GC13M019838

Summaries for ANKRD26P3 Gene

GeneCards Summary for ANKRD26P3 Gene

ANKRD26P3 (Ankyrin Repeat Domain 26 Pseudogene 3) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ANKRD26P3 Gene

Genomics for ANKRD26P3 Gene

Regulatory Elements for ANKRD26P3 Gene

Promoters for ANKRD26P3 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around ANKRD26P3 on UCSC Golden Path with GeneCards custom track

Genomic Location for ANKRD26P3 Gene

Chromosome:
13
Start:
19,262,800 bp from pter
End:
19,344,973 bp from pter
Size:
82,174 bases
Orientation:
Minus strand

Genomic View for ANKRD26P3 Gene

Genes around ANKRD26P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ANKRD26P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ANKRD26P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ANKRD26P3 Gene

Proteins for ANKRD26P3 Gene

Post-translational modifications for ANKRD26P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ANKRD26P3 Gene

Domains & Families for ANKRD26P3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ANKRD26P3 Gene

Function for ANKRD26P3 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ANKRD26P3 Gene

Localization for ANKRD26P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ANKRD26P3 Gene

Pathways & Interactions for ANKRD26P3 Gene

SuperPathways for ANKRD26P3 Gene

No Data Available

Interacting Proteins for ANKRD26P3 Gene

Gene Ontology (GO) - Biological Process for ANKRD26P3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ANKRD26P3 Gene

Drugs & Compounds for ANKRD26P3 Gene

No Compound Related Data Available

Transcripts for ANKRD26P3 Gene

mRNA/cDNA for ANKRD26P3 Gene

(2) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ANKRD26P3 Gene

Ankyrin repeat domain 26 pseudogene 3:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ANKRD26P3 Gene

No ASD Table

Relevant External Links for ANKRD26P3 Gene

GeneLoc Exon Structure for
ANKRD26P3
ECgene alternative splicing isoforms for
ANKRD26P3

Expression for ANKRD26P3 Gene

mRNA expression in normal human tissues for ANKRD26P3 Gene

mRNA differential expression in normal tissues according to GTEx for ANKRD26P3 Gene

This gene is overexpressed in Testis (x32.4).

SOURCE GeneReport for Unigene cluster for ANKRD26P3 Gene Hs.129283

genes like me logo Genes that share expression patterns with ANKRD26P3: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for ANKRD26P3 Gene

Orthologs for ANKRD26P3 Gene

Evolution for ANKRD26P3 Gene

ENSEMBL:
Gene Tree for ANKRD26P3 (if available)
TreeFam:
Gene Tree for ANKRD26P3 (if available)

No data available for Orthologs for ANKRD26P3 Gene

Paralogs for ANKRD26P3 Gene

No data available for Paralogs for ANKRD26P3 Gene

Variants for ANKRD26P3 Gene

Sequence variations from dbSNP and Humsavar for ANKRD26P3 Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type
rs494848 -- 19,302,660(+) TATCC(A/G)TTTTT intron-variant
rs184854 -- 19,284,363(-) GCAAT(G/T)GTACA intron-variant
rs549610 -- 19,266,917(+) AAAGA(C/T)AAGGA intron-variant
rs550593 -- 19,267,019(+) GAAAG(G/T)GCTAT intron-variant
rs556540 -- 19,270,481(+) gggca(G/T)agtgt intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ANKRD26P3 Gene

Variant ID Type Subtype PubMed ID
dgv1549n71 CNV Loss 21882294
esv2747051 CNV Deletion 23290073
dgv334e199 CNV Deletion 23128226
nsv899849 CNV Loss 21882294
nsv899850 CNV Gain 21882294
esv2747053 CNV Deletion 23290073

Relevant External Links for ANKRD26P3 Gene

HapMap Linkage Disequilibrium report
ANKRD26P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ANKRD26P3 Gene

Disorders for ANKRD26P3 Gene

Relevant External Links for ANKRD26P3

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ANKRD26P3

No disorders were found for ANKRD26P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ANKRD26P3 Gene

Publications for ANKRD26P3 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 67
  2. The sequence of the human genome. (PMID: 11181995) Venter J.C. … Zhu X. (Science 2001) 3

Products for ANKRD26P3 Gene

Sources for ANKRD26P3 Gene

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