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Aliases for ANKRD26P1 Gene

Aliases for ANKRD26P1 Gene

  • Ankyrin Repeat Domain 26 Pseudogene 1 2 3

External Ids for ANKRD26P1 Gene

Summaries for ANKRD26P1 Gene

GeneCards Summary for ANKRD26P1 Gene

ANKRD26P1 (Ankyrin Repeat Domain 26 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ANKRD26P1 Gene

Genomics for ANKRD26P1 Gene

Genomic Location for ANKRD26P1 Gene

Start:
46,469,337 bp from pter
End:
46,569,097 bp from pter
Size:
99,761 bases
Orientation:
Minus strand

Genomic View for ANKRD26P1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ANKRD26P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ANKRD26P1 Gene

No data available for Regulatory Elements for ANKRD26P1 Gene

Proteins for ANKRD26P1 Gene

  • Protein details for ANKRD26P1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6NSI1-AR26L_HUMAN
    Recommended name:
    Putative ankyrin repeat domain-containing protein 26-like protein
    Protein Accession:
    Q6NSI1
    Secondary Accessions:

    Protein attributes for ANKRD26P1 Gene

    Size:
    321 amino acids
    Molecular mass:
    35437 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ANKRD26P1 Gene

Proteomics data for ANKRD26P1 Gene at MOPED

Post-translational modifications for ANKRD26P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ANKRD26P1 Gene

Domains for ANKRD26P1 Gene

Protein Domains for ANKRD26P1 Gene

UniProtKB/Swiss-Prot:

AR26L_HUMAN
Similarity:
  • Contains 5 ANK repeats.:
    • Q6NSI1
genes like me logo Genes that share domains with ANKRD26P1: view

No data available for Gene Families for ANKRD26P1 Gene

Function for ANKRD26P1 Gene

Gene Ontology (GO) - Molecular Function for ANKRD26P1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 25416956
genes like me logo Genes that share ontologies with ANKRD26P1: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ANKRD26P1 Gene

Localization for ANKRD26P1 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ANKRD26P1 Gene COMPARTMENTS Subcellular localization image for ANKRD26P1 gene
Compartment Confidence
mitochondrion 2
nucleus 2
cytosol 1
peroxisome 1

No data available for Gene Ontology (GO) - Cellular Components for ANKRD26P1 Gene

Pathways for ANKRD26P1 Gene

SuperPathways for ANKRD26P1 Gene

No Data Available

Interacting Proteins for ANKRD26P1 Gene

Selected Interacting proteins: Q6NSI1-AR26L_HUMAN for ANKRD26P1 Gene via UniProtKB

Symbol External ID(s) Details
MAGEA6

Gene Ontology (GO) - Biological Process for ANKRD26P1 Gene

None

No data available for Pathways by source for ANKRD26P1 Gene

Transcripts for ANKRD26P1 Gene

mRNA/cDNA for ANKRD26P1 Gene

Unigene Clusters for ANKRD26P1 Gene

Ankyrin repeat domain 26 pseudogene 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ANKRD26P1 Gene

No ASD Table

Relevant External Links for ANKRD26P1 Gene

GeneLoc Exon Structure for
ANKRD26P1
ECgene alternative splicing isoforms for
ANKRD26P1

Expression for ANKRD26P1 Gene

mRNA expression in normal human tissues for ANKRD26P1 Gene

mRNA differential expression in normal tissues according to GTEx for ANKRD26P1 Gene

This gene is overexpressed in Testis (49.5).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for ANKRD26P1 Gene

SOURCE GeneReport for Unigene cluster for ANKRD26P1 Gene Hs.97414

genes like me logo Genes that share expressions with ANKRD26P1: view

Orthologs for ANKRD26P1 Gene

Evolution for ANKRD26P1 Gene

ENSEMBL:
Gene Tree for ANKRD26P1 (if available)
TreeFam:
Gene Tree for ANKRD26P1 (if available)

No data available for Orthologs for ANKRD26P1 Gene

Paralogs for ANKRD26P1 Gene

Selected SIMAP similar genes for ANKRD26P1 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with ANKRD26P1: view

No data available for Paralogs for ANKRD26P1 Gene

Variants for ANKRD26P1 Gene

Sequence variations from dbSNP and Humsavar for ANKRD26P1 Gene

SNP ID Clin Chr 16 pos Sequence Context AA Info Type MAF
rs1369936 -- 46,525,926(-) ATTAA(C/G)AAAAG intron-variant
rs1436434 -- 46,550,186(-) CCACT(G/T)GGTGT intron-variant
rs1436435 -- 46,531,394(-) TCAAG(A/G)TATGG intron-variant
rs1436436 - 46,531,107(-) TGTAA(A/C)AAGGT nc-transcript-variant
rs1436437 -- 46,526,568(-) TCTAC(A/G)TCTAT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ANKRD26P1 Gene

Variant ID Type Subtype PubMed ID
nsv906659 CNV Gain 21882294
nsv833216 CNV Loss 17160897
esv9407 CNV Gain 19470904
nsv526656 CNV Gain 19592680
nsv428327 CNV Gain 18775914

Relevant External Links for ANKRD26P1 Gene

HapMap Linkage Disequilibrium report
ANKRD26P1

Disorders for ANKRD26P1 Gene

No disorders were found for ANKRD26P1 Gene.

No data available for UniProtKB/Swiss-Prot for ANKRD26P1 Gene

Publications for ANKRD26P1 Gene

  1. The sequence of the human genome. (PMID: 11181995) Venter J.C. … Zhu X. (Science 2001) 3
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  3. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 3
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4
  5. The sequence and analysis of duplication-rich human chromosome 16. (PMID: 15616553) Martin J. … Pennacchio L.A. (Nature 2004) 4

Products for ANKRD26P1 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate ANKRD26P1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for ANKRD26P1
    • Block miRNA regulation of ANKRD26P1 using miScript Target Protectors

    Sources for ANKRD26P1 Gene

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