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Aliases for ANKRD23 Gene

Aliases for ANKRD23 Gene

  • Ankyrin Repeat Domain 23 2 3
  • DARP 3 4 6
  • Diabetes Related Ankyrin Repeat Protein 2 3
  • Diabetes-Related Ankyrin Repeat Protein 3 4
  • Muscle Ankyrin Repeat Protein 3 3 4
  • Ankyrin Repeat Domain-Containing Protein 23 3
  • MARP3 3

External Ids for ANKRD23 Gene

Summaries for ANKRD23 Gene

Entrez Gene Summary for ANKRD23 Gene

  • This gene is a member of the muscle ankyrin repeat protein (MARP) family and encodes a protein with four tandem ankyrin-like repeats. The protein is localized to the nucleus, functioning as a transcriptional regulator. Expression of this protein is induced during recovery following starvation. [provided by RefSeq, Jul 2008]

GeneCards Summary for ANKRD23 Gene

ANKRD23 (Ankyrin Repeat Domain 23) is a Protein Coding gene. GO annotations related to this gene include titin binding. An important paralog of this gene is ANKRD1.

UniProtKB/Swiss-Prot for ANKRD23 Gene

  • May be involved in the energy metabolism. Could be a molecular link between myofibrillar stretch-induced signaling pathways and muscle gene expression

Gene Wiki entry for ANKRD23 Gene

No data available for Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ANKRD23 Gene

Genomics for ANKRD23 Gene

Genomic Location for ANKRD23 Gene

Start:
96,824,526 bp from pter
End:
96,857,934 bp from pter
Size:
33,409 bases
Orientation:
Minus strand

Genomic View for ANKRD23 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ANKRD23 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ANKRD23 Gene

Regulatory Elements for ANKRD23 Gene

Proteins for ANKRD23 Gene

  • Protein details for ANKRD23 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q86SG2-ANR23_HUMAN
    Recommended name:
    Ankyrin repeat domain-containing protein 23
    Protein Accession:
    Q86SG2
    Secondary Accessions:
    • Q711K7
    • Q8NAJ7

    Protein attributes for ANKRD23 Gene

    Size:
    305 amino acids
    Molecular mass:
    34297 Da
    Quaternary structure:
    • Interacts with titin/TTN and MYPN.

    Alternative splice isoforms for ANKRD23 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ANKRD23 Gene

Proteomics data for ANKRD23 Gene at MOPED

Post-translational modifications for ANKRD23 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ANKRD23 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for ANKRD23 Gene

Domains for ANKRD23 Gene

Gene Families for ANKRD23 Gene

HGNC:
  • ANKRD :Ankyrin repeat domain containing

Protein Domains for ANKRD23 Gene

Suggested Antigen Peptide Sequences for ANKRD23 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q86SG2

UniProtKB/Swiss-Prot:

ANR23_HUMAN
Similarity:
  • Contains 4 ANK repeats.:
    • Q86SG2
genes like me logo Genes that share domains with ANKRD23: view

Function for ANKRD23 Gene

Molecular function for ANKRD23 Gene

UniProtKB/Swiss-Prot Function: May be involved in the energy metabolism. Could be a molecular link between myofibrillar stretch-induced signaling pathways and muscle gene expression

Gene Ontology (GO) - Molecular Function for ANKRD23 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding --
GO:0031432 titin binding IPI 14583192
genes like me logo Genes that share ontologies with ANKRD23: view

Phenotypes for ANKRD23 Gene

MGI mutant phenotypes for ANKRD23:
inferred from 1 alleles
GenomeRNAi human phenotypes for ANKRD23:
genes like me logo Genes that share phenotypes with ANKRD23: view

Animal Models for ANKRD23 Gene

MGI Knock Outs for ANKRD23:

No data available for Enzyme Numbers (IUBMB) , miRNA , Transcription Factor Targeting and HOMER Transcription for ANKRD23 Gene

Localization for ANKRD23 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ANKRD23 Gene

Nucleus. Note=Sarcomeric I-band and some intercalated disks. {ECO:0000250}.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ANKRD23 Gene COMPARTMENTS Subcellular localization image for ANKRD23 gene
Compartment Confidence
nucleus 5
cytoskeleton 4
cytosol 3

Gene Ontology (GO) - Cellular Components for ANKRD23 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus --
GO:0005654 nucleoplasm IDA --
GO:0005737 cytoplasm IDA --
GO:0014704 intercalated disc IEA --
GO:0015629 actin cytoskeleton IDA --
genes like me logo Genes that share ontologies with ANKRD23: view

Pathways for ANKRD23 Gene

SuperPathways for ANKRD23 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ANKRD23 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0009612 response to mechanical stimulus IEA --
genes like me logo Genes that share ontologies with ANKRD23: view

No data available for Pathways by source for ANKRD23 Gene

Transcripts for ANKRD23 Gene

Unigene Clusters for ANKRD23 Gene

Ankyrin repeat domain 23:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ANKRD23 Gene

No ASD Table

Relevant External Links for ANKRD23 Gene

GeneLoc Exon Structure for
ANKRD23
ECgene alternative splicing isoforms for
ANKRD23

Expression for ANKRD23 Gene

mRNA expression in normal human tissues for ANKRD23 Gene

mRNA differential expression in normal tissues according to GTEx for ANKRD23 Gene

This gene is overexpressed in Muscle - Skeletal (28.9).

SOURCE GeneReport for Unigene cluster for ANKRD23 Gene Hs.643430

mRNA Expression by UniProt/SwissProt for ANKRD23 Gene

Q86SG2-ANR23_HUMAN
Tissue specificity: Mainly expressed in heart, skeletal muscle and brown adipose tissues.
genes like me logo Genes that share expressions with ANKRD23: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and Protein expression for ANKRD23 Gene

Orthologs for ANKRD23 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ANKRD23 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ANKRD23 35
  • 99.56 (n)
  • 99.02 (a)
ANKRD23 36
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia ANKRD23 35
  • 83.33 (n)
  • 80.07 (a)
ANKRD23 36
  • 81 (a)
OneToOne
dog
(Canis familiaris)
Mammalia ANKRD23 35
  • 85.53 (n)
  • 83.55 (a)
mouse
(Mus musculus)
Mammalia Ankrd23 35
  • 86.12 (n)
  • 82.62 (a)
Ankrd23 16
Ankrd23 36
  • 82 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia ANKRD23 36
  • 73 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Ankrd23 35
  • 85.25 (n)
  • 82.3 (a)
lizard
(Anolis carolinensis)
Reptilia ANKRD23 36
  • 53 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii gabpb1 36
  • 9 (a)
ManyToMany
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 23 (a)
OneToMany
Species with no ortholog for ANKRD23:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ANKRD23 Gene

ENSEMBL:
Gene Tree for ANKRD23 (if available)
TreeFam:
Gene Tree for ANKRD23 (if available)

Paralogs for ANKRD23 Gene

Paralogs for ANKRD23 Gene

Selected SIMAP similar genes for ANKRD23 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with ANKRD23: view

Variants for ANKRD23 Gene

Sequence variations from dbSNP and Humsavar for ANKRD23 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type MAF
rs1320146 -- 96,841,990(+) CACTC(C/T)GCCCC intron-variant
rs2271780 -- 96,840,628(+) ACCAC(A/G)CGATG intron-variant
rs2271781 -- 96,840,652(+) CCTCC(A/G/T)TCTGC intron-variant
rs2271782 -- 96,840,665(+) GTGCC(A/G)CTGGA intron-variant
rs6576986 -- 96,842,583(+) GAGTA(C/G)CAGGG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ANKRD23 Gene

Variant ID Type Subtype PubMed ID
dgv650e201 CNV Deletion 23290073
esv5003 CNV Complex 18987735
nsv874677 CNV Loss 21882294
nsv874680 CNV Loss 21882294
nsv526313 CNV Loss 19592680
dgv4249n71 CNV Loss 21882294

Relevant External Links for ANKRD23 Gene

HapMap Linkage Disequilibrium report
ANKRD23

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ANKRD23 Gene

Disorders for ANKRD23 Gene

No disorders were found for ANKRD23 Gene.

No data available for UniProtKB/Swiss-Prot for ANKRD23 Gene

Publications for ANKRD23 Gene

  1. Molecular identification and characterization of a novel nuclear protein whose expression is up-regulated in insulin-resistant animals. (PMID: 12456686) Ikeda K. … Yokoyama M. (J. Biol. Chem. 2003) 2 3 4
  2. Altered titin expression, myocardial stiffness, and left ventricular function in patients with dilated cardiomyopathy. (PMID: 15238456) Nagueh S.F. … Granzier H.L. (Circulation 2004) 3 23
  3. The muscle ankyrin repeat proteins: CARP, ankrd2/Arpp and DARP as a family of titin filament-based stress response molecules. (PMID: 14583192) Miller M.K. … Labeit S. (J. Mol. Biol. 2003) 3 4
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  5. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4

Products for ANKRD23 Gene

Sources for ANKRD23 Gene

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