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Aliases for ANKRD20A9P Gene

Aliases for ANKRD20A9P Gene

  • Ankyrin Repeat Domain 20 Family, Member A9, Pseudogene 2 3

External Ids for ANKRD20A9P Gene

Previous GeneCards Identifiers for ANKRD20A9P Gene

  • GC13M019410

Summaries for ANKRD20A9P Gene

GeneCards Summary for ANKRD20A9P Gene

ANKRD20A9P (Ankyrin Repeat Domain 20 Family, Member A9, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ANKRD20A9P Gene

Genomics for ANKRD20A9P Gene

Genomic Location for ANKRD20A9P Gene

Start:
18,816,718 bp from pter
End:
18,871,969 bp from pter
Size:
55,252 bases
Orientation:
Minus strand

Genomic View for ANKRD20A9P Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ANKRD20A9P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ANKRD20A9P Gene

No data available for Regulatory Elements for ANKRD20A9P Gene

Proteins for ANKRD20A9P Gene

Post-translational modifications for ANKRD20A9P Gene

No Post-translational modifications

No data available for DME Specific Peptides for ANKRD20A9P Gene

Domains for ANKRD20A9P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ANKRD20A9P Gene

Function for ANKRD20A9P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ANKRD20A9P Gene

Localization for ANKRD20A9P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ANKRD20A9P Gene

Pathways for ANKRD20A9P Gene

SuperPathways for ANKRD20A9P Gene

No Data Available

Interacting Proteins for ANKRD20A9P Gene

Gene Ontology (GO) - Biological Process for ANKRD20A9P Gene

None

No data available for Pathways by source for ANKRD20A9P Gene

Transcripts for ANKRD20A9P Gene

mRNA/cDNA for ANKRD20A9P Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate ANKRD20A9P
    • Block miRNA regulation of ANKRD20A9P using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for ANKRD20A9P

    Primer Products

    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for ANKRD20A9P Gene

    No ASD Table

    Relevant External Links for ANKRD20A9P Gene

    GeneLoc Exon Structure for
    ANKRD20A9P
    ECgene alternative splicing isoforms for
    ANKRD20A9P

    Expression for ANKRD20A9P Gene

    mRNA expression in normal human tissues for ANKRD20A9P Gene

    mRNA differential expression in normal tissues according to GTEx for ANKRD20A9P Gene

    This gene is overexpressed in Testis (25.5) and Esophagus - Mucosa (5.5).

    SOURCE GeneReport for Unigene cluster for ANKRD20A9P Gene Hs.742626

    genes like me logo Genes that share expressions with ANKRD20A9P: view

    In Situ Assay Products

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for ANKRD20A9P Gene

    Orthologs for ANKRD20A9P Gene

    Evolution for ANKRD20A9P Gene

    ENSEMBL:
    Gene Tree for ANKRD20A9P (if available)
    TreeFam:
    Gene Tree for ANKRD20A9P (if available)

    No data available for Orthologs for ANKRD20A9P Gene

    Paralogs for ANKRD20A9P Gene

    No data available for Paralogs for ANKRD20A9P Gene

    Variants for ANKRD20A9P Gene

    Sequence variations from dbSNP and Humsavar for ANKRD20A9P Gene

    SNP ID Clin Chr 13 pos Sequence Context AA Info Type MAF
    rs11946 -- 18,834,995(+) TTAAA(C/T)CAAAA nc-transcript-variant
    rs1822375 -- 18,858,585(+) TTTTT(G/T)TCAGC nc-transcript-variant
    rs1822376 -- 18,864,934(+) CAATT(C/T)TACTG nc-transcript-variant
    rs1838121 -- 18,858,253(+) CACTA(C/T)AGAAC nc-transcript-variant
    rs1838122 -- 18,859,481(+) AATAA(A/C)AAAAG nc-transcript-variant

    Structural Variations from Database of Genomic Variants (DGV) for ANKRD20A9P Gene

    Variant ID Type Subtype PubMed ID
    dgv540e1 CNV Complex 17122850
    dgv542e1 CNV Complex 17122850
    dgv544e1 CNV Complex 17122850
    dgv43n17 CNV Loss 16327808
    nsv948 CNV Insertion 18451855
    nsv507685 CNV Insertion 20534489
    nsv9054 CNV Gain 18304495

    Relevant External Links for ANKRD20A9P Gene

    HapMap Linkage Disequilibrium report
    ANKRD20A9P

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ANKRD20A9P Gene

    Disorders for ANKRD20A9P Gene

    No disorders were found for ANKRD20A9P Gene.

    No data available for UniProtKB/Swiss-Prot for ANKRD20A9P Gene

    Publications for ANKRD20A9P Gene

    1. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo M.F. … Soares M.B. (Genome Res. 1996) 3
    2. Shotgun sequencing of the human transcriptome with ORF expressed sequence tags. (PMID: 10737800) Dias Neto E. … Simpson A.J.G. (Proc. Natl. Acad. Sci. U.S.A. 2000) 3

    Products for ANKRD20A9P Gene

    • QIAGEN qRT-PCR Assays for microRNAs that regulate ANKRD20A9P
      • QuantiTect SYBR Green Assays in human,mouse,rat
      • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
      • QuantiFast Probe-based Assays in human,mouse,rat
      • Predesigned siRNA for gene silencing in human,mouse,rat for ANKRD20A9P
      • Block miRNA regulation of ANKRD20A9P using miScript Target Protectors

      Sources for ANKRD20A9P Gene

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