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Aliases for ANKRD20A9P Gene

Aliases for ANKRD20A9P Gene

  • Ankyrin Repeat Domain 20 Family Member A9, Pseudogene 2 3 5
  • Ankyrin Repeat Domain 20 Family, Member A9, Pseudogene 2

External Ids for ANKRD20A9P Gene

Previous GeneCards Identifiers for ANKRD20A9P Gene

  • GC13M019410

Summaries for ANKRD20A9P Gene

GeneCards Summary for ANKRD20A9P Gene

ANKRD20A9P (Ankyrin Repeat Domain 20 Family Member A9, Pseudogene) is a Pseudogene.

Additional gene information for ANKRD20A9P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ANKRD20A9P Gene

Genomics for ANKRD20A9P Gene

Genomic Location for ANKRD20A9P Gene

Chromosome:
13
Start:
18,816,718 bp from pter
End:
18,871,969 bp from pter
Size:
55,252 bases
Orientation:
Minus strand

Genomic View for ANKRD20A9P Gene

Genes around ANKRD20A9P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ANKRD20A9P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ANKRD20A9P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ANKRD20A9P Gene

No data available for Regulatory Elements for ANKRD20A9P Gene

Proteins for ANKRD20A9P Gene

Post-translational modifications for ANKRD20A9P Gene

No Post-translational modifications

No data available for DME Specific Peptides for ANKRD20A9P Gene

Domains & Families for ANKRD20A9P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ANKRD20A9P Gene

Function for ANKRD20A9P Gene

Phenotypes From GWAS Catalog for ANKRD20A9P Gene

Phenotypes for ANKRD20A9P Gene

genes like me logo Genes that share phenotypes with ANKRD20A9P: view

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for ANKRD20A9P
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ANKRD20A9P Gene

Localization for ANKRD20A9P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ANKRD20A9P Gene

Pathways & Interactions for ANKRD20A9P Gene

SuperPathways for ANKRD20A9P Gene

No Data Available

Interacting Proteins for ANKRD20A9P Gene

Gene Ontology (GO) - Biological Process for ANKRD20A9P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ANKRD20A9P Gene

Drugs & Compounds for ANKRD20A9P Gene

No Compound Related Data Available

Transcripts for ANKRD20A9P Gene

mRNA/cDNA for ANKRD20A9P Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for ANKRD20A9P
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for ANKRD20A9P Gene

No ASD Table

Relevant External Links for ANKRD20A9P Gene

GeneLoc Exon Structure for
ANKRD20A9P
ECgene alternative splicing isoforms for
ANKRD20A9P

Expression for ANKRD20A9P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ANKRD20A9P Gene

mRNA differential expression in normal tissues according to GTEx for ANKRD20A9P Gene

This gene is overexpressed in Testis (x25.5) and Esophagus - Mucosa (x5.5).

NURSA nuclear receptor signaling pathways regulating expression of ANKRD20A9P Gene:

ANKRD20A9P

SOURCE GeneReport for Unigene cluster for ANKRD20A9P Gene:

Hs.742626
genes like me logo Genes that share expression patterns with ANKRD20A9P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ANKRD20A9P Gene

Orthologs for ANKRD20A9P Gene

Evolution for ANKRD20A9P Gene

ENSEMBL:
Gene Tree for ANKRD20A9P (if available)
TreeFam:
Gene Tree for ANKRD20A9P (if available)

No data available for Orthologs for ANKRD20A9P Gene

Paralogs for ANKRD20A9P Gene

No data available for Paralogs for ANKRD20A9P Gene

Variants for ANKRD20A9P Gene

Sequence variations from dbSNP and Humsavar for ANKRD20A9P Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type
rs1000145392 -- 18,841,552(+) CTTAC(C/G)TATCA nc-transcript-variant
rs1000167137 -- 18,837,140(+) CAGGT(A/G)GCGGC intron-variant, nc-transcript-variant
rs1000262469 -- 18,837,588(+) AGACG(A/G)GTCGG intron-variant, nc-transcript-variant
rs1000300671 -- 18,854,118(+) CTTTA(C/G)TACCC intron-variant, nc-transcript-variant
rs1000339523 -- 18,832,215(+) AATTT(C/G)TAAGC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ANKRD20A9P Gene

Variant ID Type Subtype PubMed ID
dgv1602n100 CNV gain 25217958
dgv1603n100 CNV loss 25217958
dgv1605n100 CNV gain 25217958
dgv1606n100 CNV gain 25217958
dgv3061n54 CNV gain 21841781
dgv322e214 CNV loss 21293372
dgv43n17 CNV loss 16327808
esv2759924 CNV gain+loss 17122850
esv2761143 CNV gain+loss 21179565
esv2761779 CNV gain 21179565
esv3631362 CNV loss 21293372
esv3631363 CNV gain 21293372
esv3631364 CNV loss 21293372
esv3631368 CNV gain 21293372
esv3892294 CNV gain+loss 25118596
nsv1043732 CNV gain 25217958
nsv1122791 CNV deletion 24896259
nsv1160085 CNV duplication 26073780
nsv1160086 CNV duplication 26073780
nsv507685 OTHER sequence alteration 20534489
nsv561186 CNV gain 21841781
nsv9054 CNV gain 18304495
nsv948 CNV insertion 18451855
nsv952519 CNV deletion 24416366
nsv976074 CNV duplication 23825009
nsv976160 CNV duplication 23825009
nsv977286 CNV duplication 23825009
nsv977287 CNV duplication 23825009
nsv977288 CNV duplication 23825009
nsv983625 CNV duplication 23825009

Relevant External Links for ANKRD20A9P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ANKRD20A9P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ANKRD20A9P Gene

Disorders for ANKRD20A9P Gene

Relevant External Links for ANKRD20A9P

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ANKRD20A9P

No disorders were found for ANKRD20A9P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ANKRD20A9P Gene

Publications for ANKRD20A9P Gene

  1. The DNA sequence and analysis of human chromosome 13. (PMID: 15057823) Dunham A … Ross MT (Nature 2004) 3 60
  2. Shotgun sequencing of the human transcriptome with ORF expressed sequence tags. (PMID: 10737800) Dias Neto E … Simpson AJ (Proceedings of the National Academy of Sciences of the United States of America 2000) 3 60
  3. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo MF … Soares MB (Genome research 1996) 3 60

Products for ANKRD20A9P Gene

Sources for ANKRD20A9P Gene

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