Aliases for ANKRD20A5P Gene
Aliases for ANKRD20A5P Gene
- Ankyrin Repeat Domain 20 Family Member A5, Pseudogene 2 3 5
- ANKRD20A5 3 4
- Putative Ankyrin Repeat Domain-Containing Protein 20A-Like Protein MGC26718 3
- Ankyrin Repeat Domain-Containing Protein 20A-Like Protein MGC26718 3
- Ankyrin Repeat Domain-Containing Protein 20A5 Pseudogene 4
- Ankyrin Repeat Domain 20 Family, Member A5, Pseudogene 2
- Putative Ankyrin Repeat Domain-Containing Protein 20A5 3
- Ankyrin Repeat Domain 20 Family, Member A4 Pseudogene 3
- Ankyrin Repeat Domain 20 Family, Member A5 2
External Ids for ANKRD20A5P Gene
- HGNC: 33833
- Entrez Gene: 440482
- Ensembl: ENSG00000186481
- UniProtKB: A0PJZ0
Previous HGNC Symbols for ANKRD20A5P Gene
- ANKRD20A5
Previous GeneCards Identifiers for ANKRD20A5P Gene
- GC18U900665
Summaries for ANKRD20A5P Gene
GeneCards Summary for ANKRD20A5P Gene
ANKRD20A5P (Ankyrin Repeat Domain 20 Family Member A5, Pseudogene) is a Pseudogene.
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ANKRD20A5P Gene
Genomics for ANKRD20A5P Gene
Regulatory Elements for ANKRD20A5P Gene
Enhancers for ANKRD20A5P Gene
| GeneHancer Identifier | Enhancer Score | Enhancer Sources | Gene-Enhancer Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites within enhancer | Gene Targets for Enhancer |
|---|---|---|---|---|---|---|---|---|
| GH18G014178 | 1 | ENCODE | 0.7 | -0.1 | -111 | 0.2 | MLX ARID4B SIN3A FEZF1 DMAP1 ZNF2 ZNF48 SLC30A9 GLIS2 ELK1 | ANKRD20A5P NF1P5 |
- Elite enhancer and/or Elite enhancer-gene association
Download GeneHancer data dump
Enhancers around ANKRD20A5P on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Location for ANKRD20A5P Gene
- Chromosome:
- 18
- Start:
- 14,179,097 bp from pter
- End:
- 14,252,140 bp from pter
- Size:
- 73,044 bases
- Orientation:
- Plus strand
Genomic View for ANKRD20A5P Gene
Genes around ANKRD20A5P on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 18p11.21 by Ensembl
- 18p11.21 by Entrez Gene
- 18p11.21 by HGNC
ANKRD20A5P Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for ANKRD20A5P Gene
Proteins for ANKRD20A5P Gene
-
Protein details for ANKRD20A5P Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- A0PJZ0-A20A5_HUMAN
- Recommended name:
- Putative ankyrin repeat domain-containing protein 20A5
- Protein Accession:
- A0PJZ0
- Q4G1B6
Protein attributes for ANKRD20A5P Gene
- Size:
- 165 amino acids
- Molecular mass:
- 18446 Da
- Quaternary structure:
- No Data Available
- SequenceCaution:
-
- Sequence=AAH22023.1; Type=Frameshift; Positions=44; Evidence={ECO:0000305};
Protein Expression for ANKRD20A5P Gene
Post-translational modifications for ANKRD20A5P Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for ANKRD20A5P
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for ANKRD20A5P
- Origene Custom Protein Services for ANKRD20A5P
- Novus Biologicals lysates for ANKRD20A5P
- Search GeneTex for Proteins for ANKRD20A5P
Assay Products
No data available for DME Specific Peptides for ANKRD20A5P Gene
Domains & Families for ANKRD20A5P Gene
Protein Domains for ANKRD20A5P Gene
- InterPro:
- ProtoNet:
Suggested Antigen Peptide Sequences for ANKRD20A5P Gene
- GenScript: Design optimal peptide antigens:
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families and UniProtKB/Swiss-Prot for ANKRD20A5P Gene
Function for ANKRD20A5P Gene
Phenotypes for ANKRD20A5P Gene
- GenomeRNAi human phenotypes for ANKRD20A5P:
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
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-
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CRISPR Products
-
OriGene CRISPR knockouts for ANKRD20A5P
miRNA Products
- Search ViGene Biosciences for ANKRD20A5P
Inhibitory RNA Products
- Origene shRNA, siRNA, and RNAi products in human, mouse, rat for ANKRD20A5P
- Browse OriGene Inhibitory RNA Products For ANKRD20A5P
- Search ViGene Biosciences for ANKRD20A5P
Clone Products
- GenScript: Custom all cDNA clones Services for ANKRD20A5P
- Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat
- VectorBuilder custom plasmid, inducible vectors for ANKRD20A5P
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for ANKRD20A5P
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Cell Line Products
- Search ViGene Biosciences for ANKRD20A5P
Flow Cytometry Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ANKRD20A5P Gene
Localization for ANKRD20A5P Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ANKRD20A5P Gene
Transcripts for ANKRD20A5P Gene
mRNA/cDNA for ANKRD20A5P Gene
- (1) REFSEQ mRNAs :
- (3) Additional mRNA sequences :
- (11) Selected AceView cDNA sequences:
- (8) Ensembl transcripts including schematic representations, and UCSC links where relevant :
Unigene Clusters for ANKRD20A5P Gene
CRISPR Products
-
OriGene CRISPR knockouts for ANKRD20A5P
miRNA Products
- Search ViGene Biosciences for ANKRD20A5P
Inhibitory RNA Products
- Origene shRNA, siRNA, and RNAi products in human, mouse, rat for ANKRD20A5P
- Browse OriGene Inhibitory RNA Products For ANKRD20A5P
- Search ViGene Biosciences for ANKRD20A5P
Clone Products
- GenScript: Custom all cDNA clones Services for ANKRD20A5P
- Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat
- VectorBuilder custom plasmid, inducible vectors for ANKRD20A5P
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for ANKRD20A5P
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Flow Cytometry Products
Relevant External Links for ANKRD20A5P Gene
- GeneLoc Exon Structure for
- ANKRD20A5P
- ECgene alternative splicing isoforms for
- ANKRD20A5P
Expression for ANKRD20A5P Gene
mRNA differential expression in normal tissues according to GTEx for ANKRD20A5P Gene
This gene is overexpressed in Esophagus - Mucosa (x12.2) and Testis (x7.6).
Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for ANKRD20A5P Gene
NURSA nuclear receptor signaling pathways regulating expression of ANKRD20A5P Gene:
ANKRD20A5PSOURCE GeneReport for Unigene cluster for ANKRD20A5P Gene:
Hs.632352Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ANKRD20A5P Gene
Orthologs for ANKRD20A5P Gene
Evolution for ANKRD20A5P Gene
- ENSEMBL:
- Gene Tree for ANKRD20A5P (if available)
- TreeFam:
- Gene Tree for ANKRD20A5P (if available)
No data available for Orthologs for ANKRD20A5P Gene
Paralogs for ANKRD20A5P Gene
(22) SIMAP similar genes for ANKRD20A5P Gene using alignment to 1 proteins:
No data available for Paralogs for ANKRD20A5P Gene
Variants for ANKRD20A5P Gene
| SNP ID | Clin | Chr 18 pos | Sequence Context | AA Info | Type |
|---|---|---|---|---|---|
| rs1000000093 | -- | 14,206,583(+) | TTTGA(A/G)TAATA | intron-variant | |
| rs1000065305 | -- | 14,207,838(+) | TTTTA(C/G)GAATC | intron-variant | |
| rs1000159362 | -- | 14,211,542(+) | TACAA(G/T)TTAAA | intron-variant | |
| rs1000302242 | -- | 14,194,571(+) | AGAGA(C/T)GAAGT | intron-variant | |
| rs1000463629 | -- | 14,211,344(+) | TTGAG(C/T)ATTTG | intron-variant |
Relevant External Links for ANKRD20A5P Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- ANKRD20A5P
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ANKRD20A5P Gene
Disorders for ANKRD20A5P Gene
Relevant External Links for ANKRD20A5P
- Atlas of Genetics and Cytogenetics in Oncology and Haematology:
- ANKRD20A5P
No disorders were found for ANKRD20A5P Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ANKRD20A5P Gene
Publications for ANKRD20A5P Gene
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4 64
- DNA sequence and analysis of human chromosome 18. (PMID: 16177791) Nusbaum C. … Lander E.S. (Nature 2005) 4 64
- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64
- Sequence comparison of human and mouse genes reveals a homologous block structure in the promoter regions. (PMID: 15342556) Suzuki Y. … Sugano S. (Genome Res. 2004) 3 64
- Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64
Products for ANKRD20A5P Gene
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- Novus Biologicals lysates for ANKRD20A5P
- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat
- Cyagen custom Knockout/knockin (KOKI) mouse models for ANKRD20A5P
- VectorBuilder custom plasmid, inducible vectors for ANKRD20A5P
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for ANKRD20A5P
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Sources for ANKRD20A5P Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) RNAdb
- (29) ASD
- (30) ECgene
- (31) GeneAnnot
- (32) CGAP SAGE
- (33) SOURCE
- (34) HomoloGene
- (35) PanEnsembl
- (36) euGenes
- (37) SGD
- (38) FlyBase
- (39) WormBase
- (40) Pseudogene
- (41) DGV
- (42) dbSNP
- (43) GenAtlas
- (44) GeneTests
- (45) HGMD
- (46) GAD
- (47) LSDB
- (48) BGMUT
- (49) HuGE
- (50) eBioscience
- (51) Atlas
- (52) Cell Signaling Technology
- (53) GenBank
- (54) H-invDB
- (55) HORDE
- (56) HUGE
- (57) IMGT
- (58) Leiden
- (59) MILLIPORE
- (60) miRBase
- (61) DME
- (62) NCBI
- (63) OriGene
- (64) PubMed
- (65) R&D Systems
- (66) TGDB
- (67) Tocris
- (68) Abcam
- (69) Novus
- (70) ProSpec
- (71) Sino Biological
- (72) GenScript
- (73) Qiagen
- (74) Cloud-Clone Corp.
- (75) Enzo Life Sciences
- (76) OCA
- (77) Proteopedia
- (78) MOPED
- (79) SPIRE
- (80) neXtProt
- (81) Reactome
- (82) GeneGo (Thomson Reuters)
- (83) fRNAdb
- (84) DISEASES
- (85) SIMAP
- (86) GenomeRNAi
- (87) LifeMap
- (88) miRTarBase
- (89) MalaCards
- (90) Invitrogen
- (91) BitterDB
- (92) Vector BioLabs
- (93) ESI-BIO
- (94) RefSeq
- (95) BioSystems
- (96) MaxQB
- (97) IUPHAR
- (98) BioGPS
- (99) Illumina
- (100) COMPARTMENTS
- (101) HOMER
- (102) PaxDb
- (103) ApexBio
- (104) Addgene
- (105) antibodies-online
- (106) CYP
- (107) NONCODE
- (108) SwitchGear Genomics
- (109) TreeFam
- (110) PathCards
- (111) GeneReviews
- (112) GeneTex
- (113) Taconic Biosciences
- (114) GTEx
- (115) ProteomicsDB
- (116) SCBT
- (117) DGIdb
- (118) ClinicalTrials
- (119) FDA Approved Drugs
- (120) RVIS
- (121) SIGNOR
- (122) diseasecard
- (123) NIH Rare Diseases
- (124) Orphanet
- (125) UMLS
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- (127) Disease Ontology
- (128) Genetics Home Reference
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- (130) MedlinePlus
- (131) CDC
- (132) NINDS
- (133) NCBI Bookshelf
- (134) ClinVar
- (135) Gene Damage Index
- (136) ViGene Biosciences
- (137) HPO
- (138) UDN
- (139) VISTA
- (140) FANTOM5
- (141) ENCODE
- (142) ProSci
- (143) Horizon
- (144) NURSA
- (145) IID
- (146) Cyagen
- (147) VectorBuilder
- (148) SNPedia
- (149) BRCA Exchange
- (150) St John's Lab
- (151) CIViC
- (152) ProteoGenix
- (153) dbSUPER
- (154) TISSUES
- (155) Gene ORGANizer