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Aliases for ANKRD20A3 Gene

Aliases for ANKRD20A3 Gene

  • Ankyrin Repeat Domain 20 Family Member A3 2 3 5
  • Ankyrin Repeat Domain 20 Family, Member A3 2

External Ids for ANKRD20A3 Gene

Previous GeneCards Identifiers for ANKRD20A3 Gene

  • GC09M045122
  • GC09M043079
  • GC09M043085

Summaries for ANKRD20A3 Gene

GeneCards Summary for ANKRD20A3 Gene

ANKRD20A3 (Ankyrin Repeat Domain 20 Family Member A3) is a Protein Coding gene. An important paralog of this gene is ANKRD20A2.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ANKRD20A3 Gene

Genomics for ANKRD20A3 Gene

Regulatory Elements for ANKRD20A3 Gene


Promoters for ANKRD20A3 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001909123 186 1600

Genomic Location for ANKRD20A3 Gene

Chromosome:
9
Start:
66,104,344 bp from pter
End:
66,153,187 bp from pter
Size:
48,844 bases
Orientation:
Minus strand

Genomic View for ANKRD20A3 Gene

Genes around ANKRD20A3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ANKRD20A3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ANKRD20A3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ANKRD20A3 Gene

Proteins for ANKRD20A3 Gene

  • Protein details for ANKRD20A3 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q5VUR7-A20A3_HUMAN
    Recommended name:
    Ankyrin repeat domain-containing protein 20A3
    Protein Accession:
    Q5VUR7

    Protein attributes for ANKRD20A3 Gene

    Size:
    823 amino acids
    Molecular mass:
    94108 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ANKRD20A3 Gene

Post-translational modifications for ANKRD20A3 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ANKRD20A3 Gene

No data available for DME Specific Peptides for ANKRD20A3 Gene

Domains & Families for ANKRD20A3 Gene

Gene Families for ANKRD20A3 Gene

Protein Domains for ANKRD20A3 Gene

Suggested Antigen Peptide Sequences for ANKRD20A3 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q5VUR7

UniProtKB/Swiss-Prot:

A20A3_HUMAN :
  • Contains 5 ANK repeats.
Similarity:
  • Contains 5 ANK repeats.
genes like me logo Genes that share domains with ANKRD20A3: view

Function for ANKRD20A3 Gene

Phenotypes for ANKRD20A3 Gene

GenomeRNAi human phenotypes for ANKRD20A3:
genes like me logo Genes that share phenotypes with ANKRD20A3: view

Animal Model Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ANKRD20A3 Gene

Localization for ANKRD20A3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ANKRD20A3 Gene

Pathways & Interactions for ANKRD20A3 Gene

SuperPathways for ANKRD20A3 Gene

No Data Available

Interacting Proteins for ANKRD20A3 Gene

Selected Interacting proteins: Q5VUR7-A20A3_HUMAN for ANKRD20A3 Gene via IID

Gene Ontology (GO) - Biological Process for ANKRD20A3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ANKRD20A3 Gene

Transcripts for ANKRD20A3 Gene

mRNA/cDNA for ANKRD20A3 Gene

Unigene Clusters for ANKRD20A3 Gene

Ankyrin repeat domain 20 family, member A3:
Representative Sequences:

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ANKRD20A3 Gene

No ASD Table

Relevant External Links for ANKRD20A3 Gene

GeneLoc Exon Structure for
ANKRD20A3
ECgene alternative splicing isoforms for
ANKRD20A3

Expression for ANKRD20A3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ANKRD20A3 Gene

mRNA differential expression in normal tissues according to GTEx for ANKRD20A3 Gene

This gene is overexpressed in Testis (x6.5).

NURSA nuclear receptor signaling pathways regulating expression of ANKRD20A3 Gene:

ANKRD20A3

SOURCE GeneReport for Unigene cluster for ANKRD20A3 Gene:

Hs.632663
genes like me logo Genes that share expression patterns with ANKRD20A3: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for ANKRD20A3 Gene

Orthologs for ANKRD20A3 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for ANKRD20A3 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia LOC738297 34
  • 98.58 (n)
Species where no ortholog for ANKRD20A3 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ANKRD20A3 Gene

ENSEMBL:
Gene Tree for ANKRD20A3 (if available)
TreeFam:
Gene Tree for ANKRD20A3 (if available)

Paralogs for ANKRD20A3 Gene

(11) SIMAP similar genes for ANKRD20A3 Gene using alignment to 2 proteins:

Pseudogenes.org Pseudogenes for ANKRD20A3 Gene

genes like me logo Genes that share paralogs with ANKRD20A3: view

Variants for ANKRD20A3 Gene

Sequence variations from dbSNP and Humsavar for ANKRD20A3 Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type
rs10115604 -- 66,105,017(-) TAATA(C/G)AAAAG intron-variant
rs10115630 -- 66,104,911(-) TATGG(A/G)TGAAT intron-variant
rs10118549 -- 66,105,263(-) AGAAA(A/G)GGATA intron-variant
rs10118894 -- 66,148,559(-) TTCCC(C/T)GGAAT intron-variant
rs10118913 -- 66,125,687(-) TATTC(A/G)ACATG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ANKRD20A3 Gene

Variant ID Type Subtype PubMed ID
nsv982397 CNV duplication 23825009
nsv982398 CNV duplication 23825009
nsv982400 CNV duplication 23825009
nsv982401 CNV duplication 23825009
nsv982402 CNV duplication 23825009
nsv982493 CNV duplication 23825009
nsv969544 CNV duplication 23825009
nsv951732 CNV deletion 24416366
nsv951479 CNV duplication 24416366
nsv8485 CNV loss 18304495
nsv614536 CNV loss 21841781
nsv1151719 CNV duplication 26484159
nsv1146494 CNV duplication 26484159
nsv1145222 CNV deletion 24896259
nsv1132689 CNV duplication 24896259
nsv1132688 CNV duplication 24896259
nsv1128996 CNV duplication 24896259
nsv1122216 CNV deletion 24896259
nsv1119302 CNV duplication 24896259
nsv1115803 CNV duplication 24896259
nsv1077111 CNV deletion 25765185
nsv1076670 CNV duplication 25765185
nsv1076174 CNV deletion 25765185
nsv1075212 CNV deletion 25765185
nsv1033842 CNV gain 25217958
nsv1020579 CNV gain+loss 25217958
esv3439554 CNV duplication 20981092
esv3419087 CNV duplication 20981092
esv3401603 CNV duplication 20981092
dgv85n82 CNV duplication 23825009
dgv4327e59 CNV duplication 20981092
dgv4326e59 CNV duplication 20981092
nsv982396 CNV duplication 23825009
nsv973699 CNV duplication 23825009
nsv973695 CNV duplication 23825009
nsv973592 CNV duplication 23825009
nsv973591 CNV duplication 23825009
nsv973332 CNV duplication 23825009
nsv973331 CNV duplication 23825009
nsv973330 CNV duplication 23825009
nsv973245 CNV duplication 23825009
nsv973244 CNV duplication 23825009
nsv973242 CNV duplication 23825009
nsv972702 CNV duplication 23825009
nsv969659 CNV duplication 23825009
nsv969658 CNV duplication 23825009
nsv969657 CNV duplication 23825009
nsv969656 CNV duplication 23825009
nsv969550 CNV duplication 23825009
nsv969549 CNV duplication 23825009
nsv969548 CNV duplication 23825009
nsv969546 CNV duplication 23825009
nsv969545 CNV duplication 23825009

Variation tolerance for ANKRD20A3 Gene

Gene Damage Index Score: 0.03; 0.58% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for ANKRD20A3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ANKRD20A3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ANKRD20A3 Gene

Disorders for ANKRD20A3 Gene

Relevant External Links for ANKRD20A3

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ANKRD20A3

No disorders were found for ANKRD20A3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ANKRD20A3 Gene

Publications for ANKRD20A3 Gene

  1. DNA sequence and analysis of human chromosome 9. (PMID: 15164053) Humphray S.J. … Dunham I. (Nature 2004) 3 4 64
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for ANKRD20A3 Gene

Sources for ANKRD20A3 Gene

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