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Aliases for ANKRD20A2 Gene

Aliases for ANKRD20A2 Gene

  • Ankyrin Repeat Domain 20 Family, Member A2 2 3

External Ids for ANKRD20A2 Gene

Previous GeneCards Identifiers for ANKRD20A2 Gene

  • GC09P045519
  • GC09P042358

Summaries for ANKRD20A2 Gene

GeneCards Summary for ANKRD20A2 Gene

ANKRD20A2 (Ankyrin Repeat Domain 20 Family, Member A2) is a Protein Coding gene. An important paralog of this gene is POTEJ.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ANKRD20A2 Gene

Genomics for ANKRD20A2 Gene

Regulatory Elements for ANKRD20A2 Gene

Genomic Location for ANKRD20A2 Gene

Start:
40,223,285 bp from pter
End:
40,266,392 bp from pter
Size:
43,108 bases
Orientation:
Plus strand

Genomic View for ANKRD20A2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ANKRD20A2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ANKRD20A2 Gene

Proteins for ANKRD20A2 Gene

  • Protein details for ANKRD20A2 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q5SQ80-A20A2_HUMAN
    Recommended name:
    Ankyrin repeat domain-containing protein 20A2
    Protein Accession:
    Q5SQ80
    Secondary Accessions:

    Protein attributes for ANKRD20A2 Gene

    Size:
    823 amino acids
    Molecular mass:
    94087 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ANKRD20A2 Gene

Proteomics data for ANKRD20A2 Gene at MOPED

Post-translational modifications for ANKRD20A2 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ANKRD20A2 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for ANKRD20A2 Gene

Domains for ANKRD20A2 Gene

Gene Families for ANKRD20A2 Gene

HGNC:
  • ANKRD :Ankyrin repeat domain containing

Protein Domains for ANKRD20A2 Gene

Suggested Antigen Peptide Sequences for ANKRD20A2 Gene

Graphical View of Domain Structure for InterPro Entry

Q5SQ80

UniProtKB/Swiss-Prot:

A20A2_HUMAN :
  • Q5SQ80
Similarity:
  • Contains 5 ANK repeats.
genes like me logo Genes that share domains with ANKRD20A2: view

Function for ANKRD20A2 Gene

Gene Ontology (GO) - Molecular Function for ANKRD20A2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding --
genes like me logo Genes that share ontologies with ANKRD20A2: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ANKRD20A2 Gene

Localization for ANKRD20A2 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ANKRD20A2 Gene COMPARTMENTS Subcellular localization image for ANKRD20A2 gene
Compartment Confidence
nucleus 3
cytosol 2

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for ANKRD20A2 Gene

Pathways for ANKRD20A2 Gene

SuperPathways for ANKRD20A2 Gene

No Data Available

Interacting Proteins for ANKRD20A2 Gene

Gene Ontology (GO) - Biological Process for ANKRD20A2 Gene

None

No data available for Pathways by source for ANKRD20A2 Gene

Transcripts for ANKRD20A2 Gene

CRISPR Products

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate ANKRD20A2
    • Block miRNA regulation of ANKRD20A2 using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for ANKRD20A2

    Primer Products

    • OriGene qSTAR qPCR primer pairs in human,mouse,rat for ANKRD20A2
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for ANKRD20A2 Gene

    No ASD Table

    Relevant External Links for ANKRD20A2 Gene

    GeneLoc Exon Structure for
    ANKRD20A2
    ECgene alternative splicing isoforms for
    ANKRD20A2

    Expression for ANKRD20A2 Gene

    mRNA expression in normal human tissues for ANKRD20A2 Gene

    mRNA differential expression in normal tissues according to GTEx for ANKRD20A2 Gene

    This gene is overexpressed in Testis (8.2).
    genes like me logo Genes that share expressions with ANKRD20A2: view

    In Situ Assay Products

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for ANKRD20A2 Gene

    Orthologs for ANKRD20A2 Gene

    This gene was present in the common ancestor of chordates.

    Orthologs for ANKRD20A2 Gene

    Organism Taxonomy Gene Similarity Type Details
    chimpanzee
    (Pan troglodytes)
    Mammalia -- 36
    • 97 (a)
    OneToMany
    LOC738297 35
    • 98.62 (n)
    • 97.21 (a)
    cow
    (Bos Taurus)
    Mammalia -- 36
    • 34 (a)
    OneToMany
    dog
    (Canis familiaris)
    Mammalia -- 36
    • 14 (a)
    ManyToMany
    -- 36
    • 42 (a)
    ManyToMany
    -- 36
    • 16 (a)
    ManyToMany
    -- 36
    • 15 (a)
    ManyToMany
    -- 36
    • 16 (a)
    ManyToMany
    -- 36
    • 29 (a)
    ManyToMany
    -- 36
    • 40 (a)
    ManyToMany
    -- 36
    • 43 (a)
    ManyToMany
    mouse
    (Mus musculus)
    Mammalia Gm1758 36
    • 36 (a)
    ManyToMany
    platypus
    (Ornithorhynchus anatinus)
    Mammalia -- 36
    • 11 (a)
    OneToMany
    chicken
    (Gallus gallus)
    Aves -- 36
    • 18 (a)
    OneToMany
    lizard
    (Anolis carolinensis)
    Reptilia -- 36
    • 41 (a)
    ManyToMany
    zebrafish
    (Danio rerio)
    Actinopterygii ANKRD7 36
    • 9 (a)
    OneToMany
    Species with no ortholog for ANKRD20A2:
    • A. gosspyii yeast (Ashbya gossypii)
    • Actinobacteria (Mycobacterium tuberculosis)
    • African clawed frog (Xenopus laevis)
    • African malaria mosquito (Anopheles gambiae)
    • Alicante grape (Vitis vinifera)
    • alpha proteobacteria (Wolbachia pipientis)
    • amoeba (Dictyostelium discoideum)
    • Archea (Pyrococcus horikoshii)
    • baker's yeast (Saccharomyces cerevisiae)
    • barley (Hordeum vulgare)
    • beta proteobacteria (Neisseria meningitidis)
    • bread mold (Neurospora crassa)
    • Chromalveolata (Phytophthora infestans)
    • common water flea (Daphnia pulex)
    • corn (Zea mays)
    • E. coli (Escherichia coli)
    • filamentous fungi (Aspergillus nidulans)
    • Firmicute bacteria (Streptococcus pneumoniae)
    • fission yeast (Schizosaccharomyces pombe)
    • fruit fly (Drosophila melanogaster)
    • green algae (Chlamydomonas reinhardtii)
    • honey bee (Apis mellifera)
    • K. lactis yeast (Kluyveromyces lactis)
    • loblloly pine (Pinus taeda)
    • malaria parasite (Plasmodium falciparum)
    • medicago trunc (Medicago Truncatula)
    • moss (Physcomitrella patens)
    • oppossum (Monodelphis domestica)
    • orangutan (Pongo pygmaeus)
    • pig (Sus scrofa)
    • rainbow trout (Oncorhynchus mykiss)
    • rat (Rattus norvegicus)
    • rice (Oryza sativa)
    • rice blast fungus (Magnaporthe grisea)
    • schistosome parasite (Schistosoma mansoni)
    • sea anemone (Nematostella vectensis)
    • sea squirt (Ciona intestinalis)
    • sea squirt (Ciona savignyi)
    • sea urchin (Strongylocentrotus purpuratus)
    • sorghum (Sorghum bicolor)
    • soybean (Glycine max)
    • stem rust fungus (Puccinia graminis)
    • sugarcane (Saccharum officinarum)
    • thale cress (Arabidopsis thaliana)
    • tomato (Lycopersicon esculentum)
    • toxoplasmosis (Toxoplasma gondii)
    • Trichoplax (Trichoplax adhaerens)
    • tropical clawed frog (Silurana tropicalis)
    • wheat (Triticum aestivum)
    • worm (Caenorhabditis elegans)

    Evolution for ANKRD20A2 Gene

    ENSEMBL:
    Gene Tree for ANKRD20A2 (if available)
    TreeFam:
    Gene Tree for ANKRD20A2 (if available)

    Paralogs for ANKRD20A2 Gene

    genes like me logo Genes that share paralogs with ANKRD20A2: view

    Variants for ANKRD20A2 Gene

    Sequence variations from dbSNP and Humsavar for ANKRD20A2 Gene

    SNP ID Clin Chr 09 pos Sequence Context AA Info Type MAF
    rs2633928 -- 40,231,845(-) agatc(A/G)agacc intron-variant
    rs2931784 -- 40,225,754(-) TTAGA(A/G)AATAT intron-variant
    rs2940892 -- 40,234,110(-) TATTG(C/T)GTGTC intron-variant
    rs2982940 -- 40,264,906(-) CATCT(C/T)GTGTT missense, reference
    rs4055464 -- 40,225,778(-) GCTCA(C/T)TGTAT intron-variant

    Structural Variations from Database of Genomic Variants (DGV) for ANKRD20A2 Gene

    Variant ID Type Subtype PubMed ID
    dgv8190n71 CNV Gain+Loss 21882294
    nsv893172 CNV Gain+Loss 21882294
    esv2738445 CNV Deletion 23290073
    dgv2362e1 CNV Complex 17122850
    nsv893173 CNV Gain 21882294
    esv2677102 CNV Deletion 23128226
    nsv8485 CNV Loss 18304495

    Relevant External Links for ANKRD20A2 Gene

    HapMap Linkage Disequilibrium report
    ANKRD20A2

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ANKRD20A2 Gene

    Disorders for ANKRD20A2 Gene

    No disorders were found for ANKRD20A2 Gene.

    No data available for UniProtKB/Swiss-Prot for ANKRD20A2 Gene

    Publications for ANKRD20A2 Gene

    1. DNA sequence and analysis of human chromosome 9. (PMID: 15164053) Humphray S.J. … Dunham I. (Nature 2004) 3 4
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

    Products for ANKRD20A2 Gene

    Sources for ANKRD20A2 Gene

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