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Aliases for ANKRD20A12P Gene

Aliases for ANKRD20A12P Gene

  • Ankyrin Repeat Domain 20 Family, Member A12, Pseudogene 2 3

External Ids for ANKRD20A12P Gene

Summaries for ANKRD20A12P Gene

GeneCards Summary for ANKRD20A12P Gene

ANKRD20A12P (Ankyrin Repeat Domain 20 Family, Member A12, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ANKRD20A12P Gene

Genomics for ANKRD20A12P Gene

Genomic Location for ANKRD20A12P Gene

Start:
161,987 bp from pter
End:
178,171 bp from pter
Size:
16,185 bases
Orientation:
Minus strand

Genomic View for ANKRD20A12P Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:

RefSeq DNA sequence for ANKRD20A12P Gene

No data available for Regulatory Elements for ANKRD20A12P Gene

Proteins for ANKRD20A12P Gene

  • Protein details for ANKRD20A12P Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8NF67-A2012_HUMAN
    Recommended name:
    Putative ankyrin repeat domain-containing protein 20A12 pseudogene
    Protein Accession:
    Q8NF67
    Secondary Accessions:

    Protein attributes for ANKRD20A12P Gene

    Size:
    263 amino acids
    Molecular mass:
    31171 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=BAC03393.1; Type=Erroneous initiation; Note=Translation N-terminally shortened.; Evidence={ECO:0000305};

neXtProt entry for ANKRD20A12P Gene

Proteomics data for ANKRD20A12P Gene at MOPED

Post-translational modifications for ANKRD20A12P Gene

No Post-translational modifications

No data available for DME Specific Peptides for ANKRD20A12P Gene

Domains for ANKRD20A12P Gene

Protein Domains for ANKRD20A12P Gene

ProtoNet:
genes like me logo Genes that share domains with ANKRD20A12P: view

No data available for Gene Families and UniProtKB/Swiss-Prot for ANKRD20A12P Gene

Function for ANKRD20A12P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ANKRD20A12P Gene

Localization for ANKRD20A12P Gene

No data available for Gene Ontology (GO) - Cellular Components for ANKRD20A12P Gene

Pathways for ANKRD20A12P Gene

SuperPathways for ANKRD20A12P Gene

No Data Available

Interacting Proteins for ANKRD20A12P Gene

Selected Interacting proteins: Q8NF67-A2012_HUMAN for ANKRD20A12P Gene via I2D

Symbol External ID(s) Details
UBE2E3

Gene Ontology (GO) - Biological Process for ANKRD20A12P Gene

None

No data available for Pathways by source for ANKRD20A12P Gene

Transcripts for ANKRD20A12P Gene

mRNA/cDNA for ANKRD20A12P Gene

(2) Additional mRNA sequences :

Unigene Clusters for ANKRD20A12P Gene

Ankyrin repeat domain 20 family, member A12, pseudogene:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ANKRD20A12P Gene

No ASD Table

Relevant External Links for ANKRD20A12P Gene

GeneLoc Exon Structure for
ANKRD20A12P
ECgene alternative splicing isoforms for
ANKRD20A12P

Expression for ANKRD20A12P Gene

mRNA expression in normal human tissues for ANKRD20A12P Gene

mRNA differential expression in normal tissues according to GTEx for ANKRD20A12P Gene

This gene is overexpressed in Adipose - Subcutaneous (5.4), Spleen (5.4), Lung (5.1), Heart - Left Ventricle (4.7), and Adipose - Visceral (Omentum) (4.3).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for ANKRD20A12P Gene

SOURCE GeneReport for Unigene cluster for ANKRD20A12P Gene Hs.648245

genes like me logo Genes that share expressions with ANKRD20A12P: view

Orthologs for ANKRD20A12P Gene

No data available for Orthologs and Evolution for ANKRD20A12P Gene

Paralogs for ANKRD20A12P Gene

No data available for Paralogs for ANKRD20A12P Gene

Variants for ANKRD20A12P Gene

Sequence variations from dbSNP and Humsavar for ANKRD20A12P Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type MAF
rs1625482 -- 1(+) TGATA(C/T)TAGCT intron-variant
rs1627910 -- 1(+) ctgag(C/T)gaaga intron-variant
rs1694635 -- 1(-) TCTCC(A/G)GTTGG upstream-variant-2KB
rs1714572 -- 1(+) CCTTT(A/G)AAACA intron-variant
rs1827037 -- 1(+) ACCCC(A/G)AATTA intron-variant

Relevant External Links for ANKRD20A12P Gene

HapMap Linkage Disequilibrium report
ANKRD20A12P

No data available for Structural Variations from Database of Genomic Variants (DGV) for ANKRD20A12P Gene

Disorders for ANKRD20A12P Gene

No disorders were found for ANKRD20A12P Gene.

No data available for UniProtKB/Swiss-Prot for ANKRD20A12P Gene

Publications for ANKRD20A12P Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  2. The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory S.G. … Bentley D.R. (Nature 2006) 3 4
  3. Systematic and quantitative assessment of the ubiquitin-modified proteome. (PMID: 21906983) Kim W. … Gygi S.P. (Mol. Cell 2011) 3
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for ANKRD20A12P Gene

Sources for ANKRD20A12P Gene

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