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Aliases for ANKRD16 Gene

Aliases for ANKRD16 Gene

  • Ankyrin Repeat Domain 16 2 3

External Ids for ANKRD16 Gene

Summaries for ANKRD16 Gene

GeneCards Summary for ANKRD16 Gene

ANKRD16 (Ankyrin Repeat Domain 16) is a Protein Coding gene. An important paralog of this gene is TRPA1.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ANKRD16 Gene

Genomics for ANKRD16 Gene

Genomic Location for ANKRD16 Gene

Start:
5,861,617 bp from pter
End:
5,889,906 bp from pter
Size:
28,290 bases
Orientation:
Minus strand

Genomic View for ANKRD16 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ANKRD16 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ANKRD16 Gene

Regulatory Elements for ANKRD16 Gene

Proteins for ANKRD16 Gene

  • Protein details for ANKRD16 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6P6B7-ANR16_HUMAN
    Recommended name:
    Ankyrin repeat domain-containing protein 16
    Protein Accession:
    Q6P6B7
    Secondary Accessions:
    • A6NEF0
    • F8WEI4
    • Q9NT01

    Protein attributes for ANKRD16 Gene

    Size:
    361 amino acids
    Molecular mass:
    39284 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for ANKRD16 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ANKRD16 Gene

Proteomics data for ANKRD16 Gene at MOPED

Post-translational modifications for ANKRD16 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ANKRD16 Gene

No data available for DME Specific Peptides for ANKRD16 Gene

Domains for ANKRD16 Gene

Gene Families for ANKRD16 Gene

HGNC:
  • ANKRD :Ankyrin repeat domain containing

Protein Domains for ANKRD16 Gene

UniProtKB/Swiss-Prot:

ANR16_HUMAN
Similarity:
  • Contains 9 ANK repeats.:
    • Q6P6B7
genes like me logo Genes that share domains with ANKRD16: view

Function for ANKRD16 Gene

Gene Ontology (GO) - Molecular Function for ANKRD16 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding --
genes like me logo Genes that share ontologies with ANKRD16: view

Phenotypes for ANKRD16 Gene

GenomeRNAi human phenotypes for ANKRD16:
genes like me logo Genes that share phenotypes with ANKRD16: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ANKRD16 Gene

Localization for ANKRD16 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ANKRD16 Gene COMPARTMENTS Subcellular localization image for ANKRD16 gene
Compartment Confidence
cytosol 3
extracellular 2
nucleus 1

No data available for Gene Ontology (GO) - Cellular Components for ANKRD16 Gene

Pathways for ANKRD16 Gene

SuperPathways for ANKRD16 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ANKRD16 Gene

None

No data available for Pathways by source for ANKRD16 Gene

Transcripts for ANKRD16 Gene

Unigene Clusters for ANKRD16 Gene

Ankyrin repeat domain 16:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ANKRD16 Gene

No ASD Table

Relevant External Links for ANKRD16 Gene

GeneLoc Exon Structure for
ANKRD16
ECgene alternative splicing isoforms for
ANKRD16

Expression for ANKRD16 Gene

mRNA expression in normal human tissues for ANKRD16 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for ANKRD16 Gene

SOURCE GeneReport for Unigene cluster for ANKRD16 Gene Hs.289828

genes like me logo Genes that share expressions with ANKRD16: view

Orthologs for ANKRD16 Gene

This gene was present in the common ancestor of animals.

Orthologs for ANKRD16 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ANKRD16 36
  • 99.54 (n)
  • 99.45 (a)
ANKRD16 37
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia ANKRD16 36
  • 82.78 (n)
  • 83.61 (a)
ANKRD16 37
  • 81 (a)
OneToOne
dog
(Canis familiaris)
Mammalia ANKRD16 36
  • 78.41 (n)
  • 77.27 (a)
ANKRD16 37
  • 77 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Ankrd16 36
  • 82.54 (n)
  • 82.63 (a)
Ankrd16 16
Ankrd16 37
  • 82 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia ANKRD16 37
  • 74 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia ANKRD16 37
  • 68 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Ankrd16 36
  • 82.44 (n)
  • 82.44 (a)
chicken
(Gallus gallus)
Aves ANKRD16 36
  • 69.66 (n)
  • 69.86 (a)
ANKRD16 37
  • 64 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia ANKRD16 37
  • 64 (a)
OneToOne
African clawed frog
(Xenopus laevis)
Amphibia Xl.14968 36
tropical clawed frog
(Silurana tropicalis)
Amphibia ankrd16 36
  • 64.35 (n)
  • 61.56 (a)
zebrafish
(Danio rerio)
Actinopterygii ankrd16 36
  • 62.36 (n)
  • 60.96 (a)
ankrd16 37
  • 58 (a)
OneToOne
fruit fly
(Drosophila melanogaster)
Insecta pain 37
  • 7 (a)
OneToOne
sea squirt
(Ciona savignyi)
Ascidiacea -- 37
  • 38 (a)
OneToOne
Species with no ortholog for ANKRD16:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ANKRD16 Gene

ENSEMBL:
Gene Tree for ANKRD16 (if available)
TreeFam:
Gene Tree for ANKRD16 (if available)

Paralogs for ANKRD16 Gene

Paralogs for ANKRD16 Gene

Selected SIMAP similar genes for ANKRD16 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with ANKRD16: view

Variants for ANKRD16 Gene

Sequence variations from dbSNP and Humsavar for ANKRD16 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type MAF
rs582359 -- 5,887,077(+) ATTTT(A/G)TGCTA intron-variant
rs583630 -- 5,879,395(+) cccag(A/G)aggtg intron-variant
rs584000 -- 5,879,432(+) CACTG(A/C)CCTCC intron-variant
rs587620 -- 5,881,024(+) AAACT(C/T)CTGGG intron-variant
rs587655 -- 5,881,045(+) CCTCC(C/T)GTCTC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ANKRD16 Gene

Variant ID Type Subtype PubMed ID
dgv1e49 CNV Loss 18971310
nsv831775 CNV Loss 17160897
nsv5654 CNV Loss 18451855
nsv825229 CNV Gain 20364138
nsv437655 CNV Loss 16327808
nsv520941 CNV Loss 19592680
esv2676037 CNV Deletion 23128226
nsv519773 CNV Loss 19592680
esv2668731 CNV Deletion 23128226

Relevant External Links for ANKRD16 Gene

HapMap Linkage Disequilibrium report
ANKRD16

Disorders for ANKRD16 Gene

No disorders were found for ANKRD16 Gene.

No data available for UniProtKB/Swiss-Prot for ANKRD16 Gene

Publications for ANKRD16 Gene

  1. The DNA sequence and comparative analysis of human chromosome 10. (PMID: 15164054) Deloukas P. … Rogers J. (Nature 2004) 3 4
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  3. hORFeome v3.1: a resource of human open reading frames representing over 10,000 human genes. (PMID: 17207965) Lamesch P. … Vidal M. (Genomics 2007) 3
  4. Genome-wide association study identifies five new breast cancer susceptibility loci. (PMID: 20453838) Turnbull C. … Easton D.F. (Nat. Genet. 2010) 3
  5. Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. (PMID: 23251661) Comuzzie A.G. … Butte N.F. (PLoS ONE 2012) 3

Products for ANKRD16 Gene

Sources for ANKRD16 Gene

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