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Aliases for ANKRD10-IT1 Gene

Subcategory (RNA class) for ANKRD10-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ANKRD10-IT1 Gene

  • ANKRD10 Intronic Transcript 1 2 3 5
  • ANKRD10 Intronic Transcript 1 (Non-Protein Coding) 2

External Ids for ANKRD10-IT1 Gene

Previous GeneCards Identifiers for ANKRD10-IT1 Gene

  • GC13M111548

Summaries for ANKRD10-IT1 Gene

GeneCards Summary for ANKRD10-IT1 Gene

ANKRD10-IT1 (ANKRD10 Intronic Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ANKRD10-IT1 Gene

Genomics for ANKRD10-IT1 Gene

Regulatory Elements for ANKRD10-IT1 Gene

Enhancers for ANKRD10-IT1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13G110303 2 FANTOM5 Ensembl ENCODE dbSUPER 20.7 +590.7 590652 9.8 CREB3L1 ZNF416 ZNF263 SP3 TBX21 MEF2D ZNF585B GLIS1 NBN NR2C1 NAXD ANKRD10-IT1 COL4A1 COL4A2 MIR8073
GH13G110963 1.7 Ensembl ENCODE dbSUPER 20.9 -66.7 -66670 5.3 HDGF PKNOX1 FOXA2 CREB3L1 ARNT ZNF2 YY1 ZNF766 ZNF416 ZNF207 NAXD ANKRD10-IT1 LINC00346 ARHGEF7 ANKRD10 LINC00431 LOC105370364
GH13G110386 1.9 FANTOM5 Ensembl ENCODE dbSUPER 12.6 +498.3 498314 28.3 HDGF FOXA2 PKNOX1 SIN3A FEZF1 ZNF2 YY1 ZNF766 ZNF143 FOS COL4A1 COL4A2 ANKRD10-IT1 COL4A2-AS2 RAB20 GC13P110400 ENSG00000275611
GH13G110321 1.9 FANTOM5 Ensembl ENCODE dbSUPER 12.6 +566.2 566226 23.2 HDGF FOXA2 PKNOX1 ZNF493 ZFP64 FEZF1 ZNF2 ETS1 TCF12 GATA2 COL4A1 COL4A2 ANKRD10-IT1 MIR8073
GH13G110911 1.7 FANTOM5 ENCODE dbSUPER 12.1 -15.5 -15538 6.5 HDGF PKNOX1 WRNIP1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 ZNF207 ANKRD10 ANKRD10-IT1 RAB20 NAXD ING1 ARHGEF7
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ANKRD10-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Location for ANKRD10-IT1 Gene

Chromosome:
13
Start:
110,894,639 bp from pter
End:
110,899,172 bp from pter
Size:
4,534 bases
Orientation:
Minus strand

Genomic View for ANKRD10-IT1 Gene

Genes around ANKRD10-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ANKRD10-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ANKRD10-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ANKRD10-IT1 Gene

Proteins for ANKRD10-IT1 Gene

Post-translational modifications for ANKRD10-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ANKRD10-IT1 Gene

Domains & Families for ANKRD10-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ANKRD10-IT1 Gene

Function for ANKRD10-IT1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ANKRD10-IT1 Gene

Localization for ANKRD10-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ANKRD10-IT1 Gene

Pathways & Interactions for ANKRD10-IT1 Gene

SuperPathways for ANKRD10-IT1 Gene

No Data Available

Interacting Proteins for ANKRD10-IT1 Gene

Gene Ontology (GO) - Biological Process for ANKRD10-IT1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ANKRD10-IT1 Gene

Drugs & Compounds for ANKRD10-IT1 Gene

No Compound Related Data Available

Transcripts for ANKRD10-IT1 Gene

mRNA/cDNA for ANKRD10-IT1 Gene

(4) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ANKRD10-IT1 Gene

ANKRD10 intronic transcript 1 (non-protein coding):
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ANKRD10-IT1 Gene

No ASD Table

Relevant External Links for ANKRD10-IT1 Gene

GeneLoc Exon Structure for
ANKRD10-IT1
ECgene alternative splicing isoforms for
ANKRD10-IT1

Expression for ANKRD10-IT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ANKRD10-IT1 Gene

SOURCE GeneReport for Unigene cluster for ANKRD10-IT1 Gene:

Hs.655994
genes like me logo Genes that share expression patterns with ANKRD10-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ANKRD10-IT1 Gene

Orthologs for ANKRD10-IT1 Gene

Evolution for ANKRD10-IT1 Gene

ENSEMBL:
Gene Tree for ANKRD10-IT1 (if available)
TreeFam:
Gene Tree for ANKRD10-IT1 (if available)

No data available for Orthologs for ANKRD10-IT1 Gene

Paralogs for ANKRD10-IT1 Gene

No data available for Paralogs for ANKRD10-IT1 Gene

Variants for ANKRD10-IT1 Gene

Relevant External Links for ANKRD10-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ANKRD10-IT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ANKRD10-IT1 Gene

Disorders for ANKRD10-IT1 Gene

Relevant External Links for ANKRD10-IT1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ANKRD10-IT1

No disorders were found for ANKRD10-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ANKRD10-IT1 Gene

Publications for ANKRD10-IT1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for ANKRD10-IT1 Gene

Sources for ANKRD10-IT1 Gene

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