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Aliases for ANKRD10 Gene

Aliases for ANKRD10 Gene

  • Ankyrin Repeat Domain 10 2 3

External Ids for ANKRD10 Gene

Previous GeneCards Identifiers for ANKRD10 Gene

  • GC13M105918
  • GC13M110367
  • GC13M109228
  • GC13M110328
  • GC13M111530
  • GC13M092129

Summaries for ANKRD10 Gene

GeneCards Summary for ANKRD10 Gene

ANKRD10 (Ankyrin Repeat Domain 10) is a Protein Coding gene. An important paralog of this gene is ANKRD37.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ANKRD10 Gene

Genomics for ANKRD10 Gene

Regulatory Elements for ANKRD10 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for ANKRD10 Gene

Start:
110,878,540 bp from pter
End:
110,915,107 bp from pter
Size:
36,568 bases
Orientation:
Minus strand

Genomic View for ANKRD10 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ANKRD10 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ANKRD10 Gene

Proteins for ANKRD10 Gene

  • Protein details for ANKRD10 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9NXR5-ANR10_HUMAN
    Recommended name:
    Ankyrin repeat domain-containing protein 10
    Protein Accession:
    Q9NXR5
    Secondary Accessions:
    • Q5VW12
    • Q9BV12

    Protein attributes for ANKRD10 Gene

    Size:
    420 amino acids
    Molecular mass:
    44768 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for ANKRD10 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ANKRD10 Gene

Proteomics data for ANKRD10 Gene at MOPED

Post-translational modifications for ANKRD10 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ANKRD10 Gene

No data available for DME Specific Peptides for ANKRD10 Gene

Domains for ANKRD10 Gene

Gene Families for ANKRD10 Gene

HGNC:
  • ANKRD :Ankyrin repeat domain containing

Protein Domains for ANKRD10 Gene

Suggested Antigen Peptide Sequences for ANKRD10 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q9NXR5

UniProtKB/Swiss-Prot:

ANR10_HUMAN :
  • Q9NXR5
Similarity:
  • Contains 4 ANK repeats.
genes like me logo Genes that share domains with ANKRD10: view

Function for ANKRD10 Gene

Gene Ontology (GO) - Molecular Function for ANKRD10 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 25416956
genes like me logo Genes that share ontologies with ANKRD10: view

Animal Model Products

CRISPR Products

miRNA for ANKRD10 Gene

miRTarBase miRNAs that target ANKRD10

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ANKRD10

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for ANKRD10 Gene

Localization for ANKRD10 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ANKRD10 Gene COMPARTMENTS Subcellular localization image for ANKRD10 gene
Compartment Confidence
cytosol 3
nucleus 3

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for ANKRD10 Gene

Pathways for ANKRD10 Gene

SuperPathways for ANKRD10 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ANKRD10 Gene

None

No data available for Pathways by source for ANKRD10 Gene

Transcripts for ANKRD10 Gene

Unigene Clusters for ANKRD10 Gene

Ankyrin repeat domain 10:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ANKRD10

Primer Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ANKRD10 Gene

ExUns: 1a · 1b · 1c · 1d · 1e ^ 2 ^ 3 ^ 4a · 4b · 4c ^ 5a · 5b · 5c ^ 6 ^ 7a · 7b · 7c · 7d ^ 8 ^ 9a · 9b · 9c ^ 10a · 10b · 10c · 10d ·
SP1: - - - - - - - - - - - - -
SP2: - - - - - - - - - - -
SP3: - - - - - - - - - - -
SP4: - - - - - - - -
SP5: - - - - - - - - - - - -
SP6: - - - - - - - - - - -
SP7: - - - - - - - - - - -
SP8: - -
SP9: - - - - - - -
SP10: - - - - -
SP11: -
SP12: - - - -
SP13: - - - - - - - - - - - - - -
SP14: - - - - - - - - - - - - - - -
SP15:
SP16: -
SP17:

ExUns: 10e · 10f · 10g · 10h · 10i ^ 11a · 11b · 11c · 11d ^ 12a · 12b · 12c
SP1: - - - -
SP2: - - -
SP3:
SP4: - - -
SP5:
SP6:
SP7:
SP8:
SP9:
SP10: - - -
SP11: - - - -
SP12:
SP13:
SP14:
SP15: - - - -
SP16:
SP17:

Relevant External Links for ANKRD10 Gene

GeneLoc Exon Structure for
ANKRD10
ECgene alternative splicing isoforms for
ANKRD10

Expression for ANKRD10 Gene

mRNA expression in normal human tissues for ANKRD10 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for ANKRD10 Gene

SOURCE GeneReport for Unigene cluster for ANKRD10 Gene Hs.525163

genes like me logo Genes that share expressions with ANKRD10: view

In Situ Assay Products

No data available for mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for ANKRD10 Gene

Orthologs for ANKRD10 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ANKRD10 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ANKRD10 35
  • 99.6 (n)
  • 99.52 (a)
ANKRD10 36
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia ANKRD10 35
  • 78.65 (n)
  • 72.47 (a)
ANKRD10 36
  • 78 (a)
OneToOne
dog
(Canis familiaris)
Mammalia ANKRD10 35
  • 84.52 (n)
  • 83.33 (a)
ANKRD10 36
  • 83 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Ankrd10 35
  • 83.29 (n)
  • 78.91 (a)
Ankrd10 16
Ankrd10 36
  • 79 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia ANKRD10 36
  • 77 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia ANKRD10 36
  • 71 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Ankrd10 35
  • 84.12 (n)
  • 81.39 (a)
chicken
(Gallus gallus)
Aves ANKRD10 35
  • 77.15 (n)
  • 72.28 (a)
ANKRD10 36
  • 72 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia ANKRD10 36
  • 64 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia ankrd10 35
  • 66.67 (n)
  • 61.85 (a)
Str.12012 35
rainbow trout
(Oncorhynchus mykiss)
Actinopterygii Omy.11213 35
zebrafish
(Danio rerio)
Actinopterygii ankrd10a 36
  • 49 (a)
OneToMany
ankrd10b 35
  • 63.4 (n)
  • 56.29 (a)
ankrd10b 36
  • 49 (a)
OneToMany
zgc55353 35
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 50 (a)
OneToMany
Species with no ortholog for ANKRD10:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ANKRD10 Gene

ENSEMBL:
Gene Tree for ANKRD10 (if available)
TreeFam:
Gene Tree for ANKRD10 (if available)

Paralogs for ANKRD10 Gene

Paralogs for ANKRD10 Gene

genes like me logo Genes that share paralogs with ANKRD10: view

Variants for ANKRD10 Gene

Sequence variations from dbSNP and Humsavar for ANKRD10 Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type MAF
rs6829 -- 110,878,917(-) TAGTG(A/G)AAATC utr-variant-3-prime, nc-transcript-variant
rs9838 -- 110,878,844(+) AAAAA(A/C)AAGGA utr-variant-3-prime, nc-transcript-variant
rs13343 -- 110,897,443(+) ACCTT(C/T)CACAT intron-variant
rs15114 -- 110,892,812(+) TTACA(C/T)TTGGG utr-variant-3-prime, intron-variant, nc-transcript-variant
rs15115 -- 110,892,772(+) GCAGG(C/T)AAACA utr-variant-3-prime, intron-variant, nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for ANKRD10 Gene

Variant ID Type Subtype PubMed ID
esv2504656 CNV Deletion 19546169
esv2018264 CNV Deletion 18987734
esv3077 CNV Deletion 18987735
esv6134 CNV Loss 19470904
esv2583876 CNV Deletion 19546169
esv1002915 CNV Deletion 20482838
esv1666847 CNV Deletion 17803354
esv2748046 CNV Deletion 23290073
esv29570 CNV Loss 19812545

Relevant External Links for ANKRD10 Gene

HapMap Linkage Disequilibrium report
ANKRD10

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ANKRD10 Gene

Disorders for ANKRD10 Gene

No disorders were found for ANKRD10 Gene.

No data available for UniProtKB/Swiss-Prot for ANKRD10 Gene

Publications for ANKRD10 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  3. Ubiquitin-mediated proteolysis of HuR by heat shock. (PMID: 19322201) Abdelmohsen K. … Gorospe M. (EMBO J. 2009) 3
  4. Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. (PMID: 22658674) Castello A. … Hentze M.W. (Cell 2012) 3
  5. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 3

Products for ANKRD10 Gene

Sources for ANKRD10 Gene

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