Set Analyses:
GeneALaCart
GeneDecks
VarElect
Advanced Search

Advanced Search

 
Search By
Section (entire)
for


 


ANKK1 Gene

protein-coding   GIFtS: 51
GCID: GC11P113258

Ankyrin Repeat And Kinase Domain Containing 1
  See related diseases
at
MalaCards
 

Aliases
for ANKK1 gene

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, 10fRNAdb, 12H-InvDB, 13NCBI, 14NONCODE, and/or 15RNAdb)
About This Section

TryGeneCards Plus
Aliases
Ankyrin Repeat And Kinase Domain Containing 11 2     Ankyrin Repeat And Protein Kinase Domain-Containing Protein 12
Protein Kinase PKK22 3     sgK2882
Sugen Kinase 2882 3     SGK2883
PKK22 3     SgK2883
X-kinase2 3     EC 2.7.118
EC 2.7.11.13 8     

External Ids:    HGNC: 210271   Entrez Gene: 2552392   Ensembl: ENSG000001702097   OMIM: 6087745   UniProtKB: Q8NFD23   

Export aliases for ANKK1 gene to outside databases

Previous GC identifers: GC11P113292 GC11P112796 GC11P112763 GC11P109186


Summaries
for ANKK1 gene

(According to Entrez Gene, GeneCards, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

TryGeneCards Plus
Entrez Gene summary for ANKK1 Gene:
The protein encoded by this gene belongs to the Ser/Thr protein kinase family, and protein kinase superfamily
involved in signal transduction pathways. This gene is closely linked to DRD2 gene (GeneID:1813) on chr 11, and a
well studied restriction fragment length polymorphism (RFLP) designated TaqIA, was originally associated with the
DRD2 gene, however, later was determined to be located in exon 8 of ANKK1 gene (PMIDs: 18621654, 15146457), where
it causes a nonconservative amino acid substitution. It is not clear if this gene plays any role in
neuropsychiatric disorders previously associated with Taq1A RFLP. (provided by RefSeq, Sep 2009)

GeneCards Summary for ANKK1 Gene:
ANKK1 (ankyrin repeat and kinase domain containing 1) is a protein-coding gene. Diseases associated with ANKK1 include keratinizing squamous cell carcinoma, and dopamine receptor d2, reduced brain density of. GO annotations related to this gene include protein serine/threonine kinase activity. An important paralog of this gene is RIPK3.

Gene Wiki entry for ANKK1 Gene


Genomic Views
for ANKK1 gene

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 75), Regulatory elements and Epigenetics data according to QIAGEN, and/or SwitchGear Genomics)
About This Section

TryGeneCards Plus
RefSeq DNA sequence:
NC_000011.10  NT_033899.9  NC_018922.2  
Regulatory elements:
   Regulatory transcription factor binding sites in the ANKK1 gene promoter:
         HFH-3   C/EBPbeta   p53   AREB6   FOXI1   POU2F1   POU2F1b   POU2F1a   FOXJ2 (long isoform)   FOXJ2   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmid: ANKK1 promoter sequence
   Search Chromatin IP Primers for ANKK1

Epigenetics:
DNA Methylation CpG Assay Predesigned for Pyrosequencing in human, mouse, rat ANKK1


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 11q23.2   Ensembl cytogenetic band:  11q23.2   HGNC cytogenetic band: 11q23.2

ANKK1 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
ANKK1 gene location

GeneLoc information about chromosome 11         GeneLoc Exon Structure

GeneLoc location for GC11P113258:  view genomic region     (about GC identifiers)

Start:
 113,258,513 bp from pter      End:
 113,271,140 bp from pter
Size:
 12,628 bases      Orientation:
 plus strand

Proteins
for ANKK1 gene

(According to 1UniProtKB, HORDE, 2neXtProt, Ensembl, and/or Reactome, Modification sites according to PhosphoSitePlus, Specific Peptides from DME, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Cloud-Clone Corp.,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Cloud-Clone Corp., Antibodies by EMD Millipore, R&D Systems, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, LSBio, Abcam, and/or Cloud-Clone Corp.)
About This Section

TryGeneCards Plus
UniProtKB/Swiss-Prot: ANKK1_HUMAN, Q8NFD2 (See protein sequence)
Recommended Name: Ankyrin repeat and protein kinase domain-containing protein 1  
Size: 765 amino acids; 84632 Da

Explore the universe of human proteins at neXtProt for ANKK1: NX_Q8NFD2

Explore proteomics data for ANKK1 at MOPED

Post-translational modifications: 

  • Modification sites at neXtProt
  • Modification sites at PhosphoSitePlus
    • 2 DME Specific Peptides for ANKK1 (Q8NFD2)
     KPGNILL  LHLDLKP 


    See ANKK1 Protein Expression from SPIRE MOPED, PaxDB, and MaxQB

    REFSEQ proteins: NP_848605.1  
    ENSEMBL proteins: 
     ENSP00000306678   ENSP00000445810  

    ANKK1 Human Recombinant Protein Products:

    Browse Purified and Recombinant Proteins at EMD Millipore
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    Browse OriGene full length recombinant human proteins expressed in human HEK293 cells
    OriGene Protein Over-expression Lysate for ANKK1
    OriGene Custom MassSpec
    OriGene Custom Protein Services for ANKK1
    GenScript Custom Purified and Recombinant Proteins Services for ANKK1
    Novus Biologicals ANKK1 Lysate
    Browse Sino Biological Recombinant Proteins
    Browse Sino Biological Cell Lysates
    Browse ProSpec Recombinant Proteins
    Cloud-Clone Corp. Proteins for ANKK1

    ANKK1 Antibody Products:

    Browse EMD Millipore's Extensive Line of Mono- and Polyclonal Antibodies
    Browse R&D Systems for Antibodies
    OriGene Antibodies for ANKK1
    OriGene Custom Antibody Services for ANKK1
    Novus Biologicals ANKK1 Antibodies
    Abcam antibodies for ANKK1
    Cloud-Clone Corp. Antibodies for ANKK1
    ThermoFisher Antibodies for ANKK1
    LSBio Antibodies in human, mouse, rat for ANKK1

    ANKK1 Assay Products:

    Browse Kits and Assays available from EMD Millipore
    OriGene Custom Assay Services for ANKK1
    Browse R&D Systems for biochemical assays
    GenScript Custom Assay Services for ANKK1
    Browse Enzo Life Sciences for kits & assays
    Cloud-Clone Corp. ELISAs for ANKK1
    Cloud-Clone Corp. CLIAs for ANKK1

    Domains /
    Families
    for ANKK1 gene

    (According to HGNC, IUPHAR, InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    TryGeneCards Plus    		 HGNC Gene Families:
    ANKRD: Ankyrin repeat domain containing

    IUPHAR Guide to PHARMACOLOGY protein family classification: ankyrin repeat and kinase domain containing 1
    Receptor interacting protein kinase (RIPK) family

    Selected InterPro protein domains (see all 6):
     IPR011009 Kinase-like_dom
     IPR008271 Ser/Thr_kinase_AS
     IPR000719 Prot_kinase_dom
     IPR002110 Ankyrin_rpt
     IPR001245 Ser-Thr/Tyr_kinase_cat_dom

    Graphical View of Domain Structure for InterPro Entry Q8NFD2

    ProtoNet protein and cluster: Q8NFD2

    UniProtKB/Swiss-Prot: ANKK1_HUMAN, Q8NFD2
    Similarity: Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family
    Similarity: Contains 12 ANK repeats
    Similarity: Contains 1 protein kinase domain


    ANKK1 for domains           About GeneDecksing


    Function
    for ANKK1 gene

    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory, genOway,
    transcription factor targeting from QIAGEN and/or HOMER, miRNA Gene Targets from miRTarBase, shRNA from OriGene, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, SwitchGear Genomics, Gene Editing from DNA2.0, Clones from OriGene, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, ESI BIO, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene.)
    About This Section

    TryGeneCards Plus
    Molecular Function:

         UniProtKB/Swiss-Prot Summary: ANKK1_HUMAN, Q8NFD2
    Catalytic activity: ATP + a protein = ADP + a phosphoprotein

         Enzyme Numbers (IUBMB): EC 2.7.11.11 2 EC 2.7.112

         Gene Ontology (GO): Selected molecular function terms (see all 6):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0004672protein kinase activity ----
    GO:0004674protein serine/threonine kinase activity IEA--
    GO:0004713protein tyrosine kinase activity ----
    GO:0005515protein binding ----
    GO:0005524ATP binding IEA--
         
    ANKK1 for ontologies           About GeneDecksing


    Phenotypes:
         4 GenomeRNAi human phenotypes for ANKK1:
     Decreased focal adhesion (FA)   Decreased influenza A/WSN/33 r  Decreased substrate adherent c  Decreased viability 

    Animal Models:
       inGenious Targeting Laboratory: Let us create your new Knockout/Knockin mouse model for ANKK1
       inGenious Targeting Laboratory: Contact us about creating complex and humanized mouse models for ANKK1

       genOway customized KO model: permanent, tissue-specific or time-controlled inactivation for ANKK1
       genOway customized Knockin model: humanization, point mutation, expression monitoring, etc. for ANKK1

    miRNA
    Products:            		Block miRNA regulation of human, mouse, rat ANKK1 using miScript Target Protectors
    Search for qRT-PCR Assays for microRNAs that regulate ANKK1
    SwitchGear 3'UTR luciferase reporter plasmid: ANKK1 3' UTR sequence
    Inhib. RNA
    Products:            		OriGene RNAi products in human, mouse, rat for ANKK1
    Predesigned siRNA for gene silencing in human, mouse, rat ANKK1

    Gene Editing
    Products:    		DNA2.0 Custom Protein Engineering Service for ANKK1

    Clone
    Products:             		 OriGene clones in human, mouse for ANKK1 (see all 6)
    OriGene ORF clones in mouse, rat for ANKK1
    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
    GenScript: all cDNA clones in your preferred vector: ANKK1 (NM_178510)
    Browse Sino Biological Human cDNA Clones
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for ANKK1
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat ANKK1

    Cell Line
    Products:             		GenScript Custom overexpressing Cell Line Services for ANKK1
    Browse ESI BIO Cell Lines and PureStem Progenitors for ANKK1 
    In Situ Assay
    Products:       
         		Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for ANKK1


    Localization
    for ANKK1 gene

    (According to UniProtKB, COMPARTMENTS Subcellular localization database, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene.)
    About This Section

    TryGeneCards Plus
    Subcellular locations from COMPARTMENTS: 

    CompartmentConfidence
    cytosol3
    cytoskeleton2
    nucleus2
    endoplasmic reticulum1

    Pathways & Interactions
    for ANKK1 gene

    (SuperPaths according to PathCards, Pathways according to R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Sino Biological, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to QIAGEN, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene).
    About This Section

    TryGeneCards Plus



        Custom Pathway & Disease-focused RT2 Profiler PCR Arrays for ANKK1
    Interactions:

        GeneGlobe Interaction Network for ANKK1

    Gene Ontology (GO): 1 biological process term:    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006468protein phosphorylation ----

    ANKK1 for ontologies           About GeneDecksing



    Drugs & Compounds
    for ANKK1 gene

    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience, ApexBio, HMDB, BitterDB, and/or Novoseek, Ligands according to IUPHAR, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB)
    About This Section

    TryGeneCards Plus
    Browse Small Molecules at EMD Millipore
       Browse drugs & compounds from Enzo Life Sciences
      Browse compounds at ApexBio 

    Browse Tocris compounds for ANKK1

    Selected PharmGKB related drug/compound annotations for ANKK1 gene (see all 10)    About this table
    Drug/compound PharmGKB Annotation
    Drugs used in nicotine dependenceCA  
    antipsychoticsCA  
    bupropionCA  
    clozapineCA  
    ethanolCA  
    methadoneCA  
    nemonaprideCA  
    nicotineCA  
    olanzapineCA  
    risperidoneCA  



    ANKK1 for compounds           About GeneDecksing



    Transcripts
    for ANKK1 gene

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 236 Homo sapiens; Apr 25 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    Conferences by KenesGroup, exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN, SwitchGear Genomics,
    Tagged/untagged cDNA clones from OriGene, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, and/or QIAGEN )
    About This Section

    TryGeneCards Plus
    REFSEQ mRNAs for ANKK1 gene: 
    NM_178510.1  

    Unigene Cluster for ANKK1:

    Ankyrin repeat and kinase domain containing 1
    Hs.448473  [show with all ESTs]
    Unigene Representative Sequence: AJ541797
    2 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000303941(uc001pny.3) ENST00000542948
    miRNA
    Products:             		 Block miRNA regulation of human, mouse, rat ANKK1 using miScript Target Protectors
    Search for qRT-PCR Assays for microRNAs that regulate ANKK1
    SwitchGear 3'UTR luciferase reporter plasmid: ANKK1 3' UTR sequence
    Inhib. RNA
    Products:             		OriGene RNAi products in human, mouse, rat for ANKK1
    Predesigned siRNA for gene silencing in human, mouse, rat ANKK1
    Clone
    Products:             		 OriGene clones in human, mouse for ANKK1 (see all 6)
    OriGene ORF clones in mouse, rat for ANKK1
    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
    GenScript: all cDNA clones in your preferred vector: ANKK1 (NM_178510)
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for ANKK1
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat ANKK1
    Primer
    Products:            		OriGene qSTAR qPCR primer pairs in human, mouse for ANKK1
    Pre-validated RT2 qPCR Primer Assay in human, mouse, rat ANKK1
      QuantiTect SYBR Green Assays in human, mouse, rat ANKK1
      QuantiFast Probe-based Assays in human, mouse, rat ANKK1

    Additional mRNA sequence: 

    AF487542.1 AJ541797.2 

    1 DOTS entry:

    DT.100736992 

    3 AceView cDNA sequences:

    NM_178510 AF487542 AJ541797 

    GeneLoc Exon Structure

    2 Alternative Splicing Database (ASD) splice patterns (SP) for ANKK1    About this scheme

    ExUns: 1 ^ 2a · 2b ^ 3 ^ 4 ^ 5 ^ 6a · 6b ^ 7 ^ 8
    SP1:                    -                                       
    SP2:                                                            


    ECgene alternative splicing isoforms for ANKK1

    Expression
    for ANKK1 gene

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, Protein expression images according to data from SPIRE 1MOPED, 2PaxDb, and 3MaxQB, plus additional links to SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from QIAGEN, Primers from OriGene, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    TryGeneCards Plus

    ANKK1 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS <intensity>2/3
    CGAP TAG: --
    ANKK1 Expression
    About this image

    ANKK1 Protein expression data from MOPED1, PaxDb2 and MaxQB3:     About this image

    ANKK1 Protein Expression

    SOURCE GeneReport for Unigene cluster: Hs.448473

    UniProtKB/Swiss-Prot: ANKK1_HUMAN, Q8NFD2
    Tissue specificity: Highly expressed in brain and weakly expressed in placenta and spinal cord

        Custom PCR Arrays for ANKK1
    Primer
    Products:    		OriGene qSTAR qPCR primer pairs in human, mouse for ANKK1
    Pre-validated RT2 qPCR Primer Assay in human, mouse, rat ANKK1
    QuantiTect SYBR Green Assays in human, mouse, rat ANKK1
    QuantiFast Probe-based Assays in human, mouse, rat ANKK1
    In Situ
    Assay Products:     
         		Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for ANKK1

    Orthologs
    for ANKK1 gene

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    TryGeneCards Plus
    This gene was present in the common ancestor of eukaryotes.

    Orthologs for ANKK1 gene from Selected species (see all 13)    About this table
    Organism Taxonomic
    classification    		 Gene Description Human
    Similarity    		 Orthology
    Type    		 Details
    mouse
    (Mus musculus)    		 Mammalia Ankk11 , 5 ankyrin repeat and kinase domain containing 11, 5 81.67(n)1
    79.54(a)1    		   9 (26.83 cM)5
    2448591  NM_172922.31  NP_766510.11 
     494152225 
    chicken
    (Gallus gallus)    		 Aves ANKK11 ankyrin repeat and kinase domain containing 1 67.7(n)
    62.77(a)    		   100859406  XM_003642615.2  XP_003642663.2 
    lizard
    (Anolis carolinensis)    		 Reptilia --
    		 Uncharacterized protein
    		 20(a)
    		 many ↔ many
    		 LGc(6849338-6872565)
    tropical clawed frog
    (Xenopus tropicalis)    		 Amphibia ankk11 ankyrin repeat and kinase domain containing 1 57.9(n)
    55.07(a)    		   100493231  XM_002937826.2  XP_002937872.1 
    zebrafish
    (Danio rerio)    		 Actinopterygii ankk11 ankyrin repeat and kinase domain containing 1 53.03(n)
    42.88(a)    		   100170831  NM_001130665.1  NP_001124137.1 
    thale cress
    (Arabidopsis thaliana)    		 eudicotyledons KEG1 KEG 41.44(n)
    28.99(a)    		   831197  NM_121356.2  NP_196857.2 


    ENSEMBL Gene Tree for ANKK1 (if available)
    TreeFam Gene Tree for ANKK1 (if available)

    Paralogs
    for ANKK1 gene

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section

    TryGeneCards Plus
    Paralogs for ANKK1 gene
    RIPK32  RIPK42  RIPK12  RIPK22  
    13 SIMAP similar genes for ANKK1 using alignment to 3 protein entries:     ANKK1_HUMAN (see all proteins):
    IkBa    MARK4    NRARP    DKFZp434B2328    PSMD10    PPP1R12A
    CDKN2C    CDKN2D    dik    ANKRD29    RIPK4    NUAK1
    ANKDD1A

    ANKK1 for paralogs           About GeneDecksing



    Genomic Variants
    for ANKK1 gene

    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, 4UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD), the Human Cytochrome P450 Allele Nomenclature Database, and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers, Cancer Mutation PCR Arrays and Assays, and Copy Number PCR Arrays from QIAGEN)
    About This Section

    TryGeneCards Plus
    Selected SNPs for ANKK1 (see all 441)    About this table    
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance    		Chr 11 posSequence#AA
    Chg    		TypeMore#Allele
    freq    		PopTotal
    sample    		More
    ----------
    VAR_0403734
    		A lung squamous cell carcinoma sample4--see VAR_0403732 R L mis40--------
    VAR_0403744
    		A lung neuroendocrine carcinoma sample4--see VAR_0403742 E K mis40--------
    VAR_0403724
    		A lung large cell carcinoma sample4--see VAR_0403722 Q L mis40--------
    VAR_0403624
    		A breast infiltrating ductal carcinoma sample4--see VAR_0403622 K T mis40--------
    rs18004971,2,,4
    		C,F,O,A,Hpathogenic1113134184(-) TGCCTC/TGACCA 2 K E mis129Minor allele frequency- T:0.30MN EU NA NS EA CSA WA 3658
    rs347166411,2
    		C--109194688(+) TTTTT-/TTTTTT 1 -- int11Minor allele frequency- T:0.00NA 2
    rs1390541941,2
    		--113119975(+) TGACTC/TAGGCC 1 -- us2k10--------
    rs1843253061,2
    		--113120075(+) GGCTGG/TTCACC 1 -- us2k10--------
    rs1891731791,2
    		--113120263(+) AGCCAA/GAGCAA 1 -- us2k10--------
    rs569471741,2
    		F--113120312(+) TCCTGC/TTCCTG 1 -- us2k11Minor allele frequency- T:0.03WA 118

    HapMap Linkage Disequilibrium report for ANKK1 (113258513 - 113271140 bp)

    Structural Variations
         Database of Genomic Variants (DGV) 1 variation for ANKK1:    About this table    
    Variant IDTypeSubtypePubMed ID
    nsv515795CNV Loss19592680

    Human Gene Mutation Database (HGMD): ANKK1
    Site Specific Mutation Identification with PCR Assays
    SeqTarget long-range PCR primers for resequencing ANKK1
    DNA2.0 Custom Variant and Variant Library Synthesis for ANKK1

    Disorders / Diseases
    for ANKK1 gene

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Conferences by KenesGroup, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    TryGeneCards Plus
    OMIM gene information: 608774    OMIM disorders: --

    Selected diseases for ANKK1 (see all 26):    
    About MalaCards
    keratinizing squamous cell carcinoma    dopamine receptor d2, reduced brain density of    alexithymia    heroin dependence
    microcystic adenoma    pityriasis rubra pilaris    neuroleptic malignant syndrome    tardive dyskinesia
    bipolar i disorder    antisocial personality disorder    erythrokeratodermia variabilis    nicotine dependence
    alcohol dependence    cocaine dependence    personality disorder    drug dependence
    traumatic brain injury    alcohol abuse    memory impairment    brain injury

    5 diseases from the University of Copenhagen DISEASES database for ANKK1:
    Nicotine dependence     Alcohol dependence     Antisocial personality disorder     Alexithymia
    Heroin dependence

    ANKK1 for disorders           About GeneDecksing

    Genetic Association Database (GAD): ANKK1
    Human Genome Epidemiology (HuGE) Navigator: ANKK1 (39 documents)

    Export disorders for ANKK1 gene to outside databases

    Publications
    for ANKK1 gene

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    TryGeneCards Plus
    PubMed articles for ANKK1 gene, integrated from 10 sources (see all 92):
    (articles sorted by number of sources associating them with ANKK1)    		    Utopia: connect your pdf to the dynamic
    world of online information

    1. Identification and characterization of ANKK1: a novel kinase gene closely linked to DRD2 on chromosome band 11q23.1. (PubMed id 15146457)1, 2, 3, 9 Neville M.J.... Walton R.T. (Hum. Mutat. 2004)
    2. Family-based association analyses of alcohol dependence phenotypes across DRD2 and neighboring gene ANKK1. (PubMed id 17850642)1, 4, 9 Dick D.M....Goate A. (Alcohol. Clin. Exp. Res. 2007)
    3. Single nucleotide polymorphisms in ANKK1 and the dopamine D2 receptor gene affect cognitive outcome shortly after traumatic brain injury: a replication and extension study. (PubMed id 18698520)1, 4, 9 McAllister T.W....Tsongalis G.J. (Brain Inj 2008)
    4. Genetic diagnostics of functional variants of the human dopamine D2 receptor gene. (PubMed id 19512960)1, 4, 9 Doehring A....LAPtsch J. (Psychiatr. Genet. 2009)
    5. The 3' region of the DRD2 gene is involved in genetic susceptibility to schizophrenia. (PubMed id 14741327)1, 2, 9 Dubertret C....Gorwood P. (Schizophr. Res. 2004)
    6. Family-based analysis of genetic variation underlying psychosis-inducing effects of cannabis: sibling analysis and proband follow-up. (PubMed id 21041608)1, 4 van Winkel R. (Arch. Gen. Psychiatry 2011)
    7. Genetic, personality, and environmental predictors of drug use in adolescents. (PubMed id 19717274)1, 4 Conner B.T....Noble E.P. (J Subst Abuse Treat 2010)
    8. A genetic schizophrenia-susceptibility region located between the ANKK1 and DRD2 genes. (PubMed id 20138949)1, 4 Dubertret C....Gouya L. (amp 2010)
    9. The D2 dopamine receptor gene variant C957T affects human fear conditioning and aversive priming. (PubMed id 19900188)1, 4 Huertas E....Hoenicka J. (Genes Brain Behav. 2010)
    10. A large-scale candidate gene association study of age at menarche and age at natural menopause. (PubMed id 20734064)1, 4 He C....Hunter D.J. (Hum. Genet. 2010)

    External Searches for ANKK1 gene

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section

    TryGeneCards Plus
     ANDOR
    Aliases
    Free Text  
      Query String
    		PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    Genome Databases showing ANKK1 gene

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section

    TryGeneCards Plus
    Entrez Gene: 255239 HGNC: 21027 AceView: ANKK1 Ensembl:ENSG00000170209 euGenes: HUgn255239
    ECgene: ANKK1 H-InvDB: ANKK1

    Other Databases showing ANKK1 gene

    (According to HUGE)
    About This Section

    TryGeneCards Plus    		   --

    Specialized Databases showing ANKK1 gene

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL, and/or others, e.g. Wikipedia and GeneReviews, via UniProtKB/Swiss-Prot)
    About This Section

    TryGeneCards Plus
    NameDescription
    PharmGKB entry for ANKK1 Pharmacogenomics, SNPs, Pathways

    Intellectual Property
    for ANKK1 gene

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section

    TryGeneCards Plus    		Patent Information for ANKK1 gene:
    Search GeneIP for patents involving ANKK1

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    Products
    for ANKK1 gene

    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Cloud-Clone Corp., Thermo Fisher Scientific, LSBio, Gene Editing from DNA2.0. Clones from OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript, and ESI BIO, PCR Arrays from QIAGEN, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, Enzo Life Sciences, and/or ApexBio, In Situ Hybridization Assays from
    Advanced Cell Diagnostics, Animal models from inGenious Targeting Laboratory, genOway)
    About This Section

    TryGeneCards Plus
     
     EMD Millipore genomic analysis products

      
     Browse Antibodies   Browse Cell Culture Products  
     Browse ELISAs   Browse Flow Cytometry Kits  
     Browse Primer Pairs   Browse Enzyme Activity Assays/Reagents  
     Browse ELISpot/FluoroSpot Kits/Development Modules   Browse TFB/Immunoprecipitation Assays  
     Browse Apoptosis Detection Kits/Reagents   Browse Ubiquitin Proteasome Pathway (UPP) Assay Kits/Reagents  
     Browse DNA Damage/Repair Kits/Reagents   Browse Luminex Assays  
     Browse Cell Selection/Detection Kits/Reagents   Browse Secondary Antibodies/Controls/Staining Reagents  
     Browse Recombinant/Natural Proteins   Browse Stem Cell Products  
     Browse cDNA Clones   Browse Proteome Profiler Antibody Arrays  
     OriGene Antibodies for ANKK1   OriGene RNAi products in human, mouse, rat for ANKK1  
     Browse OriGene qPCR primer pairs and template standards   OriGene Protein Over-expression Lysate for ANKK1  
     OriGene Custom Mass Spec   OriGene clones in human, mouse for ANKK1  
     OriGene qSTAR qPCR primer pairs in human, mouse for ANKK1   Browse OriGene full length recombinant human proteins expressed in human HEK293 cells  
     OriGene ORF clones in mouse, rat for ANKK1   OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling  
     OriGene Custom Antibody Services for ANKK1   OriGene Custom Protein Services for ANKK1  

         		 
     Block miRNA regulation of human, mouse, rat ANKK1 using miScript Target Protectors SeqTarget long-range PCR primers for resequencing ANKK1
     DNA Methylation CpG Assay Predesigned for Pyrosequencing in human, mouse, rat ANKK1 Predesigned siRNA for gene silencing in human, mouse, rat ANKK1
     QuantiFast Probe-based Assays in human, mouse, rat ANKK1 QuantiTect SYBR Green Assays in human, mouse, rat ANKK1
     Custom PCR Arrays for ANKK1 Search Chromatin IP Primers for ANKK1
     Pre-validated RT2 qPCR Primer Assay in human, mouse, rat ANKK1  GeneGlobe Interaction Network for ANKK1
     Regulatory tfbs in ANKK1 promoter
     GenScript Custom Purified and Recombinant Proteins Services for ANKK1 GenScript cDNA clones with any tag delivered in your preferred vector for ANKK1
     GenScript Custom Assay Services for ANKK1 GenScript Custom overexpressing Cell Line Services for ANKK1
     CloneReady with Over 120,000 Genes  Gene Synthesis: Any Gene in Any Vector
     Vector-based siRNA and miRNA, Ready for Transfection Gene Mutant Library, Variants up to 10^11
     Plasmid Preparation Custom Peptide Services
     Search for Antibodies & Assays

     Search Tocris compounds for ANKK1
     Browse Sino Biological Proteins
     Browse Sino Biological Cell Lysates
     Browse Sino Biological cDNA Clones
     4000+ Proteins
     Search Sino Biological for antibodies, proteins & pathways
     Protein Production Services
     Transfection Reagents
     Protein A/G/L resins
     Isotyping reagents
     Search www.enzolifesciences.com for proteins, assays, substrates, inhibitors & antibodies

     Novus Tissue Slides
     ANKK1 antibodies
     ANKK1 lysates
     Antibodies for ANKK1
     See all of Abcam's Antibodies, Kits and Proteins for ANKK1
     Custom Antibody / Protein Production Service
     Bulk Purchasing
     Advantages of Rabbit Monoclonal antibodies
     Abcam protocols and scientific support
     Browse ProSpec Recombinant Proteins
     Proteins for ANKK1
     Antibodies for ANKK1
     ELISAs for ANKK1
     CLIAs for ANKK1



     Browse ESI BIO Cell Lines and PureStem Progenitors for ANKK1
     Gene Synthesis
     Protein Engineering
     Variant Library Synthesis
     Codon Optimization
     Protein Production and Purification
     Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for ANKK1
     SwitchGear 3'UTR luciferase reporter plasmids for ANKK1
     SwitchGear Promoter luciferase reporter plasmids for ANKK1
     ThermoFisher Antibodies for ANKK1
     Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat ANKK1
     inGenious Targeting Laboratory: Let us create your new Knockout/Knockin mouse model for ANKK1
     inGenious Targeting Laboratory: Contact us about creating complex and humanized mouse models for ANKK1
     LSBio Antibodies in human, mouse, rat for ANKK1
    Customized transgenic rodents for:
     Humanization
     Biomarker expression
     Off-target effect monitoring
     Translational medicine
     Tissue-specific gene expresssion
     Time-controlled gene expresssion
     Browse compounds at ApexBio
           
    GeneCards Homepage - Last full update: 7 May 2014 - Incrementals: 9 May 2014 , 2 Jun 2014 , 26 Jun 2014 , 30 Jun 2014

    View Random Gene

    Category
    (GIFtS: )
    GIFtS Group
    The GeneCards human gene database gene index: 1 3 5 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 

    Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

    Copyright © 1996-2014 , Weizmann Institute of Science. All Rights Reserved.
    Hot genes      Disease genes      ANKK1 gene at Home site.
    Version: 3.12.142 28 July 2014
    hostname: 356980-web2.xennexinc.com index build: 126 solr: 1.4