Free for academic non-profit institutions. Other users need a Commercial license

Aliases for ANKDD1A Gene

Aliases for ANKDD1A Gene

  • Ankyrin Repeat And Death Domain Containing 1A 2 3

External Ids for ANKDD1A Gene

Summaries for ANKDD1A Gene

GeneCards Summary for ANKDD1A Gene

ANKDD1A (Ankyrin Repeat And Death Domain Containing 1A) is a Protein Coding gene. An important paralog of this gene is ANKDD1B.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ANKDD1A Gene

Genomics for ANKDD1A Gene

Genomic Location for ANKDD1A Gene

Start:
64,911,902 bp from pter
End:
64,958,700 bp from pter
Size:
46,799 bases
Orientation:
Plus strand

Genomic View for ANKDD1A Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ANKDD1A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ANKDD1A Gene

Regulatory Elements for ANKDD1A Gene

Proteins for ANKDD1A Gene

  • Protein details for ANKDD1A Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q495B1-AKD1A_HUMAN
    Recommended name:
    Ankyrin repeat and death domain-containing protein 1A
    Protein Accession:
    Q495B1
    Secondary Accessions:
    • Q495B2
    • Q495B3
    • Q8N7A0
    • Q8NBS5

    Protein attributes for ANKDD1A Gene

    Size:
    522 amino acids
    Molecular mass:
    57550 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=BAC05399.1; Type=Miscellaneous discrepancy; Note=Probable cloning artifact.; Evidence={ECO:0000305}; Sequence=BAC11532.1; Type=Erroneous translation; Note=Wrong choice of frame.; Evidence={ECO:0000305};

    Alternative splice isoforms for ANKDD1A Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ANKDD1A Gene

Proteomics data for ANKDD1A Gene at MOPED

Post-translational modifications for ANKDD1A Gene

No Post-translational modifications

Other Protein References for ANKDD1A Gene

No data available for DME Specific Peptides for ANKDD1A Gene

Domains for ANKDD1A Gene

Gene Families for ANKDD1A Gene

HGNC:
  • ANKRD :Ankyrin repeat domain containing

Protein Domains for ANKDD1A Gene

Graphical View of Domain Structure for InterPro Entry

Q495B1

UniProtKB/Swiss-Prot:

AKD1A_HUMAN
Domain:
  • Contains 1 death domain.:
    • Q495B1
Similarity:
  • Contains 11 ANK repeats.:
    • Q495B1
genes like me logo Genes that share domains with ANKDD1A: view

Function for ANKDD1A Gene

Gene Ontology (GO) - Molecular Function for ANKDD1A Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding --
genes like me logo Genes that share ontologies with ANKDD1A: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ANKDD1A Gene

Localization for ANKDD1A Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ANKDD1A Gene COMPARTMENTS Subcellular localization image for ANKDD1A gene
Compartment Confidence
cytosol 1
nucleus 1
peroxisome 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for ANKDD1A Gene

Pathways for ANKDD1A Gene

SuperPathways for ANKDD1A Gene

No Data Available

Interacting Proteins for ANKDD1A Gene

Gene Ontology (GO) - Biological Process for ANKDD1A Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007165 signal transduction IEA --
genes like me logo Genes that share ontologies with ANKDD1A: view

No data available for Pathways by source for ANKDD1A Gene

Transcripts for ANKDD1A Gene

Unigene Clusters for ANKDD1A Gene

Ankyrin repeat and death domain containing 1A:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ANKDD1A Gene

ExUns: 1 ^ 2a · 2b ^ 3 ^ 4 ^ 5 ^ 6 ^ 7 ^ 8 ^ 9a · 9b · 9c ^ 10a · 10b ^ 11 ^ 12a · 12b ^ 13 ^ 14 ^ 15 ^ 16 ^ 17a · 17b
SP1: - - - -
SP2: - - - - - -
SP3:
SP4: - - - -
SP5: - -
SP6: - - - -
SP7:
SP8: - -

Relevant External Links for ANKDD1A Gene

GeneLoc Exon Structure for
ANKDD1A
ECgene alternative splicing isoforms for
ANKDD1A

Expression for ANKDD1A Gene

mRNA expression in normal human tissues for ANKDD1A Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for ANKDD1A Gene

SOURCE GeneReport for Unigene cluster for ANKDD1A Gene Hs.207157

genes like me logo Genes that share expressions with ANKDD1A: view

No data available for mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for ANKDD1A Gene

Orthologs for ANKDD1A Gene

This gene was present in the common ancestor of animals.

Orthologs for ANKDD1A Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ANKDD1A 35
  • 99.36 (n)
  • 99.04 (a)
ANKDD1A 36
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia ANKDD1A 36
  • 60 (a)
OneToOne
dog
(Canis familiaris)
Mammalia ANKDD1A 35
  • 86.49 (n)
  • 85.46 (a)
ANKDD1A 36
  • 84 (a)
OneToOne
mouse
(Mus musculus)
Mammalia A730067D02Rik 35
  • 84.44 (n)
  • 85.12 (a)
Ankdd1a 16
Ankdd1a 36
  • 82 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia ANKDD1A 36
  • 67 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Ankdd1a 35
  • 83.2 (n)
  • 83.06 (a)
chicken
(Gallus gallus)
Aves ANKDD1A 35
  • 67.08 (n)
  • 64.88 (a)
ANKDD1A 36
  • 63 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia ANKDD1A 36
  • 61 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia ankdd1a 35
  • 63.7 (n)
  • 60.32 (a)
rainbow trout
(Oncorhynchus mykiss)
Actinopterygii Omy.8740 35
zebrafish
(Danio rerio)
Actinopterygii ankdd1a 35
  • 63.04 (n)
  • 59.06 (a)
ankdd1a 36
  • 57 (a)
OneToOne
worm
(Caenorhabditis elegans)
Secernentea ikb-1 36
  • 15 (a)
ManyToMany
mib-1 36
  • 15 (a)
ManyToMany
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 42 (a)
OneToMany
Species with no ortholog for ANKDD1A:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for ANKDD1A Gene

ENSEMBL:
Gene Tree for ANKDD1A (if available)
TreeFam:
Gene Tree for ANKDD1A (if available)

Paralogs for ANKDD1A Gene

Paralogs for ANKDD1A Gene

Pseudogenes.org Pseudogenes for ANKDD1A Gene

genes like me logo Genes that share paralogs with ANKDD1A: view

Variants for ANKDD1A Gene

Sequence variations from dbSNP and Humsavar for ANKDD1A Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type MAF
rs832878 -- 64,915,471(+) TCCCC(A/G)AGAGC intron-variant
rs832887 -- 64,922,163(+) CTCCC(C/T)CACCT intron-variant
rs832888 -- 64,923,193(+) GTGAT(A/G)TGTGT intron-variant
rs832889 -- 64,923,655(+) CCATG(A/C)CCCTA intron-variant
rs876431 -- 64,924,336(+) GTGGT(A/G)TCACC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ANKDD1A Gene

Variant ID Type Subtype PubMed ID
dgv31n68 CNV Loss 17160897
nsv833041 CNV Loss 17160897
esv2659431 CNV Deletion 23128226

Relevant External Links for ANKDD1A Gene

HapMap Linkage Disequilibrium report
ANKDD1A

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ANKDD1A Gene

Disorders for ANKDD1A Gene

No disorders were found for ANKDD1A Gene.

No data available for UniProtKB/Swiss-Prot for ANKDD1A Gene

Publications for ANKDD1A Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. New gene functions in megakaryopoiesis and platelet formation. (PMID: 22139419) Gieger C. … Soranzo N. (Nature 2011) 3
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 4
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4
  5. Analysis of the DNA sequence and duplication history of human chromosome 15. (PMID: 16572171) Zody M.C. … Nusbaum C. (Nature 2006) 4

Products for ANKDD1A Gene

Sources for ANKDD1A Gene

Back to Top

Content