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Aliases & Descriptions for ANK2
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases Ankyrin-B 3 DKFZp686M09125 2 DKFZp686P0948 2 FLJ38277 2 LQT4 2 , 5 OTTHUMP00000163834 2 brank-2 2
Descriptions Brain ankyrin 3 Non-erythroid ankyrin 3 ankyrin 2 2 ankyrin 2, neuronal 2 ankyrin B 2 ankyrin, brain 2 ankyrin, nonerythroid 2 ankyrin-2, nonerythrocytic 2 long (electrocardiographic) QT syndrome 4 1
Search outside databases for aliases for ANK2 genePrevious GC identifers: GC04P114383 GC04P114251 GC04P114429 GC04P114328
Summaries for ANK2 (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for ANK2 : This gene encodes a member of the ankyrin family of proteins that link the integral membraneproteins to the underlying spectrin-actin cytoskeleton. Ankyrins play key roles in activities suchas cell motility, activation, proliferation, contact and the maintenance of specialized membranedomains. Most ankyrins are typically composed of three structural domains: an amino-terminaldomain containing multiple ankyrin repeats; a central region with a highly conserved spectrinbinding domain; and a carboxy-terminal regulatory domain which is the least conserved and subjectto variation. The protein encoded by this gene is required for targeting and stability of Na/Caexchanger 1 in cardiomyocytes. Mutations in this gene cause long QT syndrome 4. Multipletranscript variants encoding different isoforms have been described. [provided by RefSeq] UniProtKB/Swiss-Prot: ANK2_HUMAN, Q01484 Function : Attaches integral membrane proteins to cytoskeletal elements. Also binds to cytoskeletalproteins. Required for coordinate assembly of Na/Ca exchanger, Na/K ATPase and InsP3 receptor atsarcoplasmic reticulum sites in cardiomyocytes. Required for the coordinated expression of theNa/K ATPase, Na/Ca exchanger and beta-2-spectrin (SPTBN1) in the inner segment of rodphotoreceptors. Required for expression and targeting of SPTBN1 in neonatal cardiomyocytes and forthe regulation of neonatal cardiomyocyte contraction rate
Genomic Location for ANK2
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
SABiosciences )About This Section
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the ANK2 gene Entrez Gene cytogenetic band: 4q25-q27 Ensembl cytogenetic band: 4q26 HGNC cytogenetic band: 4q25-q27 ANK2 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 4 GeneLoc Exon Structure
GeneLoc location for GC04P114132:
(about GC identifiers )
Start:
114,190,281 bp from pter
End:
114,529,333 bp from pter
Size:
339,053 bases
Orientation:
plus strand
RefSeq DNA sequence: NC_000004.10 NT_016354.18 Proteins for ANK2
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: ANK2_HUMAN, Q01484 (See
protein sequence )Recommended Name: Ankyrin-2 Size : 3924 amino acids; 430255 Da
Subunit : Interacts with RHBG and SPTBN1
Subcellular location : Cytoplasm, cytoskeleton. Membrane. Cytoplasm, myofibril, sarcomere, M-band(By similarity). Apical cell membrane (By similarity). Cell membrane. Note=Expressed at the apicalmembrane of airway lung epithelial cells (By similarity). Localized to the plasma membrane of theinner segments of photoreceptors in retina. Colocalizes with SPTBN1 in a distict intracellularcompartment of neonatal cardiomyocytes (By similarity)
Sequence caution : Sequence=AAI25237.1; Type=Frameshift; Positions=1372; Sequence=CAB42644.1;Type=Miscellaneous discrepancy; Note=CDS lacks C-terminal region which is nevertheless present inthe underlying cDNA;
Secondary accessions : Q01485 Q08AC7 Q08AC8 Q7Z3L5Alternative splicing : 6 isoforms : Q01484-1 Q01484-2 Q01484-3 Q01484-4 Q01484-5 Q01484-7
Post-translational modifications:
Phosphorylated at multiple sites by different protein kinases and each phosphorylation eventregulates the protein's structure and function (Potential)1
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (3 alternative transcripts):
NP_001120965.1 NP_001139.3 NP_066187.2 ENSEMBL proteins: ENSP00000354873 ENSP00000378044 ENSP00000264366 ENSP00000349588 ENSP00000340561 Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 2 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for ANK2: Assays for ANK2:
Protein
Domains/ Families for ANK2(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry Q01484 ProtoNet protein and cluster: Q01484
3 Blocks protein families : IPB000488 Death domain IPB000906 ZU5 domain IPB002110 Ankyrin repeat signature UniProtKB/Swiss-Prot: ANK2_HUMAN, Q01484 Similarity : Contains 24 ANK repeatsSimilarity : Contains 1 death domainSimilarity : Contains 1 ZU5 domain
Gene Function for ANK2
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
Q-PCR Products
from Invitrogen ,
Millipore ,
OriGene , and/or
Abnova ,
siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 3 ): NM_001148 Applied Biosystems Silencer ® siRNAs for ANK2 Sigma-Aldrich siRNA and siRNA Panels for ANK2 Sigma-Aldrich shRNA for ANK2 Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 3 ): NM_001127493                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 3 ): NM_001127493                                  untagged cDNA clones in CMV expression vector (see all 3 ): NM_001127493  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_001148 UniProtKB/Swiss-Prot: ANK2_HUMAN, Q01484 Function : Attaches integral membrane proteins to cytoskeletal elements. Also binds to cytoskeletalproteins. Required for coordinate assembly of Na/Ca exchanger, Na/K ATPase and InsP3 receptor atsarcoplasmic reticulum sites in cardiomyocytes. Required for the coordinated expression of theNa/K ATPase, Na/Ca exchanger and beta-2-spectrin (SPTBN1) in the inner segment of rodphotoreceptors. Required for expression and targeting of SPTBN1 in neonatal cardiomyocytes and forthe regulation of neonatal cardiomyocyte contraction rate
Genatlas biochemistry entry for ANK2 :ankyrin 2,non erythrocytic,intermediate filament associated protein (IFAP,type III)
5 MGI mutant phenotypes (inferred from 1 allele ) (MGI details for Ank2) :1 Gene Ontology (GO) molecular function term (links to tree view) :
About this table
Pathways & Interactions for ANK2
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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Gene Network CentralTM Interacting Genes and Proteins Network for ANK2 5/20 Interacting proteins for ANK2 (ENSP00000349588 3 Q01484 1 , 2 ) via UniProtKB, MINT, and/or STRING (see all 20
)About this table 1 Gene Ontology (GO) biological process term (links to tree view) :
GO ID Qualified GO term Evidence PubMed IDs GO:0007165 signal transduction
IEA --
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Drugs & Compounds for ANK2 (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Browse Tocris compounds for ANK2 3 Novoseek chemical compound relationships for ANK2 gene
About this table 1 PharmGKB drug compound relationship for ANK2 gene
Drug compound
PharmGKB Relations
PubMed IDs for articles supporting these relationships
antiarrhythmics FA  GN  12571597
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Transcripts for ANK2(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
Abnova ,
siRNAs from Applied Biosystems ,
Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 3 ): NM_001148 Sigma-Aldrich siRNA and siRNA Panels for ANK2 Sigma-Aldrich shRNA for ANK2 Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_001127493 NM_001148 NM_020977
REFSEQ mRNAs for ANK2 gene (3 alternative transcripts): NM_001127493.1 NM_001148.4 NM_020977.3
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001127493 NM_001148 NM_020977
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 3 ): NM_001127493                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 3 ): NM_001127493                                  untagged cDNA clones in CMV expression vector (see all 3 ): NM_001127493  
Additional cDNA sequence: AF131823.1 AK021894.1 AK095596.1 AK128049.1 AK294720.1 AK299767.1 AK299815.1 AK299893.1 AK307601.1 BC017986.1 BC047498.1 BC125235.1 BC125236.1 BX537758.1 BX538132.1 BX538239.1 CR619899.1 DQ925692.1 DQ925693.1 X56957.1 X56958.2 Z26634.2
24/25 DOTS entries (see all 25
): DT.447644 DT.100777845 DT.91747668 DT.91739745 DT.100777840 DT.99971372 DT.100777841 DT.91787899 DT.121257819 DT.40213674 DT.95213758 DT.40123217 DT.97762373 DT.100642065 DT.121257779 DT.121257784 DT.121257902 DT.97768810 DT.100777842 DT.121257785 DT.121257885 DT.75119078 DT.75176435 DT.75193347
24/227 AceView cDNA sequences (see all 227
):BM696824 T33415 AW129277 T33416 AI093196 T06245 AU132049 BE349232 BM717916 AI144158 BU735405 AL043865 AI292203 F03344 BI757580 AI493092 X56958 CR619899 AL045249 AI804466 AA285185 BQ006948 N78488 AL707820
highest scoring ESTs for ANK2 :X56958 AA019015 AA019018 AA019771 AA054200 AA285185 AA305051 AA334593 AA350438 AI123882
Unigene Cluster for ANK2: Ankyrin 2, neuronal Hs.620557 [show with all ESTs ] Unigene Representative Sequence: NM_001148 GeneLoc Exon Structure 5/8 Alternative Splicing Database (ASD) splice patterns (SP) for ANK2 (see all 8
) ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5 ^ 6a · 6b ^ 7 ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 ^ 13 ^ 14 ^ 15 ^ 16 ^ 17 ^ 18 ^ 19 ^ 20 ^ 21 ^ 22 ^ 23 ^ 24 ^ SP1 :                                                     SP2 :                                                     SP3 :     -   -                                               SP4 :                                                     SP5 :                                                    
ExUns: 25 ^ 26 ^ 27a · 27b ^ 28 ^ 29a · 29b ^ 30 ^ 31 ^ 32 ^ 33 ^ 34 ^ 35 ^ 36 ^ 37 ^ 38 ^ 39 ^ 40a · 40b ^ 41 ^ 42a · 42b · 42c SP1 :     -                                           SP2 :                               -         -         SP3 :                                               SP4 :                                       -         SP5 :                                              
About this scheme ECgene alternative splicing isoforms for ANK2 5 Ensembl transcripts including schematic representations : ENST00000361149
ENST00000394537
ENST00000264366
ENST00000357077
ENST00000343056
Expression for ANK2
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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ANK2 expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for ANK2 1 / 2 / 3
9 probe-sets matching ANK2 gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: TATTAGTTAASOURCE GeneReport for Unigene cluster: Hs.620557 Expression variation in blood from EXPOLDB for ANK2
UniProtKB/Swiss-Prot: ANK2_HUMAN, Q01484 Tissue specificity : Present in plasma membrane of neurons as well as glial cells throughout thebrain. Expressed in fetal brain and in temporal cortex of adult brain. Also expressed in the innersegments of rod photoreceptors in retina
Orthologs for ANK2
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for ANK2 gene from 5/9 species (see all 9
)
Organism
Gene
Locus
Description
Human Similarity
NCBI accessions
chimpanzee (Pan troglodytes)
ANK21
--
ankyrin 2, neuronal
99.5(n) 99.28(a)
461444 XM_517403.2 XP_517403.2
mouse (Mus musculus)
Ank25
3 (62.50 cM)
ankyrin 2, brain
--
BP753425
chicken (Gallus gallus)
ANK21
--
ankyrin 2, neuronal
62.86(n) 61.87(a)
422689 XM_420641.2 XP_420641.2
zebrafish (Danio rerio)
BI845253.12
--
--
77.08(n)
BI845253.1
fruit fly (Drosophila melanogaster)
Ank23
66A10
cytoskeletal anchoring cytoskeletal protein binding
60(a) (best of 4)
--
About this table Species with no ortholog for ANK2 ENSEMBL Gene Tree for ANK2 Paralogs for ANK2 (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for ANK2 gene ANK3 2 ANK1 2
SNPs/Variants for ANK2 (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for ANK2 (up to first 250kb)
Disorders & Mutations for ANK2
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 106410 disorders : 600919 600919 UniProtKB/Swiss-Prot: ANK2_HUMAN, Q01484
Defects in ANK2 are the cause of long QT syndrome type 4 (LQT4) [MIM:600919]; also knownas sick sinus syndrome with bradycardia. Long QT syndromes are heart disorders characterized by aprolonged QT interval on the ECG and polymorphic ventricular arrhythmias. They cause syncope andsudden death in response to exercise or emotional stress. LQT4 displays many atypical featurescompared to classical long QT syndromes, including pronounced sinus bradycardia, polyphasic Twaves and atrial fibrillation. Cardiac repolarization defects may be not as severe as in classicalLQT syndromes and prolonged QT interval on EKG is not a consistent feature
7 Novoseek disease relationships for ANK2 gene
About this table 1 PharmGKB disease relationship for ANK2 gene
Disease
PharmGKB Relations
PubMed IDs for articles supporting these relationships
Long QT Syndrome FA  GN  12571597
About this table Human Gene Mutation Database : ANK2 Genetic Association Database: ANK2 Human Genome Epidemiology Navigator: ANK2 (2 documents)
Medical News for ANK2 (Possibly Related Articles in
Doctor's Guide )
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--
Publications for ANK2 (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/79 PubMed articles for ANK2 gene (see all 79
): Ankyrin-B mutation causes type 4 long-QT cardiac arrhythmia and sudden cardiac death. (PubMed id 12571597) 2, 3, 4, 7 Mohler P.J....Bennett V. (2003) A cardiac arrhythmia syndrome caused by loss of ankyrin-B function. (PubMed id 15178757) 1, 3, 4 Mohler P.J.... Bennett V. (2004) Ankyrin-B targets beta2-spectrin to an intracellular compartment in neonatal cardiomyocytes. (PubMed id 15262991) 1, 3, 4 Mohler P.J....Bennett V. (2004) Isolation and characterization of cDNAs encoding human brain ankyrins reveal a family of alternatively spliced genes. (PubMed id 1830053) 1, 3, 4 Otto E.... Bennett V. (1991) Isolation and chromosomal localization of a novel nonerythroid ankyrin gene. (PubMed id 1833308) 1, 3, 4 Tse W.T.... Forget B.G. (1991) Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. (PubMed id 17081983) 3, 4 Olsen J.V....Mann M. (2006) The ammonium transporter RhBG: requirement of a tyrosine-based signal and ankyrin-G for basolateral targeting and membrane anchorage in polarized kidney epithelial cells. (PubMed id 15611082) 3, 4 Lopez C.... Colin Y. (2005) Identification of a common genetic substrate underlying postpartum cardiac events in congenital long QT syndrome. (PubMed id 15851119) 3, 6 Khositseth A....Ackerman M.J. (2004) Mapping of a gene for long QT syndrome to chromosome 4q25-27. (PubMed id 7485162) 2, 3 Schott J.J....Moisan J.P. (1995) 440-kD ankyrinB: structure of the major developmentally regulated domain and selective localization in unmyelinated axons. (PubMed id 8253844) 3, 4 Chan W.... Bennett V. (1993)
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Genome Databases showing ANK2
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing ANK2
(According to HUGE )
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Specialized Databases showing ANK2 (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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-- Services for ANK2 (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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Products for ANK2:
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GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009