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Aliases for AMZ2P1 Gene

Aliases for AMZ2P1 Gene

  • Archaelysin Family Metallopeptidase 2 Pseudogene 1 2 3

External Ids for AMZ2P1 Gene

Previous GeneCards Identifiers for AMZ2P1 Gene

  • GC17M062963
  • GC17M058355

Summaries for AMZ2P1 Gene

GeneCards Summary for AMZ2P1 Gene

AMZ2P1 (Archaelysin Family Metallopeptidase 2 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for AMZ2P1 Gene

Genomics for AMZ2P1 Gene

Genomic Location for AMZ2P1 Gene

Start:
64,966,550 bp from pter
End:
64,975,585 bp from pter
Size:
9,036 bases
Orientation:
Minus strand

Genomic View for AMZ2P1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for AMZ2P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for AMZ2P1 Gene

No data available for Regulatory Elements for AMZ2P1 Gene

Proteins for AMZ2P1 Gene

Post-translational modifications for AMZ2P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for AMZ2P1 Gene

Domains for AMZ2P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for AMZ2P1 Gene

Function for AMZ2P1 Gene

Phenotypes for AMZ2P1 Gene

GenomeRNAi human phenotypes for AMZ2P1:
genes like me logo Genes that share phenotypes with AMZ2P1: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for AMZ2P1 Gene

Localization for AMZ2P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for AMZ2P1 Gene

Pathways for AMZ2P1 Gene

SuperPathways for AMZ2P1 Gene

No Data Available

Interacting Proteins for AMZ2P1 Gene

Gene Ontology (GO) - Biological Process for AMZ2P1 Gene

None

No data available for Pathways by source for AMZ2P1 Gene

Transcripts for AMZ2P1 Gene

Unigene Clusters for AMZ2P1 Gene

Archaelysin family metallopeptidase 2 pseudogene 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for AMZ2P1 Gene

No ASD Table

Relevant External Links for AMZ2P1 Gene

GeneLoc Exon Structure for
AMZ2P1
ECgene alternative splicing isoforms for
AMZ2P1

Expression for AMZ2P1 Gene

mRNA expression in normal human tissues for AMZ2P1 Gene

SOURCE GeneReport for Unigene cluster for AMZ2P1 Gene Hs.396447

genes like me logo Genes that share expressions with AMZ2P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for AMZ2P1 Gene

Orthologs for AMZ2P1 Gene

Evolution for AMZ2P1 Gene

ENSEMBL:
Gene Tree for AMZ2P1 (if available)
TreeFam:
Gene Tree for AMZ2P1 (if available)

No data available for Orthologs for AMZ2P1 Gene

Paralogs for AMZ2P1 Gene

No data available for Paralogs for AMZ2P1 Gene

Variants for AMZ2P1 Gene

Sequence variations from dbSNP and Humsavar for AMZ2P1 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type MAF
rs2063335 -- 64,967,828(+) GCTGG(C/T)CCTAA nc-transcript-variant
rs6504265 -- 64,972,130(+) ctctc(A/G)cctca intron-variant
rs6504266 -- 64,972,221(+) catgt(A/G)gtctc intron-variant
rs7212449 -- 64,976,905(+) CACTC(C/T)TGCTT upstream-variant-2KB
rs9902649 -- 64,974,497(+) GCTAC(A/G)GCTTA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for AMZ2P1 Gene

Variant ID Type Subtype PubMed ID
dgv45n68 CNV Loss 17160897
nsv908688 CNV Loss 21882294
nsv908689 CNV Gain 21882294

Relevant External Links for AMZ2P1 Gene

HapMap Linkage Disequilibrium report
AMZ2P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for AMZ2P1 Gene

Disorders for AMZ2P1 Gene

Relevant External Links for AMZ2P1

Genetic Association Database (GAD)
AMZ2P1
genes like me logo Genes that share disorders with AMZ2P1: view

No data available for UniProtKB/Swiss-Prot for AMZ2P1 Gene

Publications for AMZ2P1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3
  4. Charting the landscape of tandem BRCT domain-mediated protein interactions. (PMID: 22990118) Woods N.T. … Monteiro A.N. (Sci Signal 2012) 3

Products for AMZ2P1 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate AMZ2P1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for AMZ2P1
    • Block miRNA regulation of AMZ2P1 using miScript Target Protectors

    Sources for AMZ2P1 Gene

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