AMOTL1 Gene
protein-coding GIFtS: 51
GCID: GC11P094441
|
|
angiomotin like 1
| |
Aliases
for AMOTL1 gene
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc,
7Ensembl,
8DME,
9miRBase,
and/or 10fRNAdb)
About This Section
|
| Aliases |
|---|
| Angiomotin Like 11 2 | | JEAP1 2 | | Angiomotin-Like Protein 12 | | Junction-Enriched And Associated Protein2 |
Export aliases for AMOTL1 gene to outside databasesPrevious GC identifers: GC11P096831 GC11P096010 GC11P094686 GC11P094189 GC11P094141 GC11P094501 GC11P090566 |
Summaries
for AMOTL1 gene(According to Entrez Gene,
Tocris Bioscience,
Wikipedia's
Gene Wiki,
PharmGKB,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
|
Entrez Gene summary for AMOTL1:
The protein encoded by this gene is a peripheral membrane protein that is a component of tight junctions or TJs. TJsform an apical junctional structure and act to control paracellular permeability and maintain cell polarity. Thisprotein is related to angiomotin, an angiostatin binding protein that regulates endothelial cell migration andcapillary formation. (provided by RefSeq, Jul 2008)
UniProtKB/Swiss-Prot: AMOL1_HUMAN, Q8IY63Function: Inhibits the Wnt/beta-catenin signaling pathway, probably by recruiting CTNNB1 to recycling endosomes andhence preventing its translocation to the nucleus
Gene Wiki entry for AMOTL1
|
Genomic Views
for AMOTL1 gene
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69),
Regulatory elements and Epigenetics data according to
QIAGEN,
SABiosciences, and/or
SwitchGear Genomics)
About This Section
| RefSeq DNA sequence:- NC_000011.9 NC_018922.1 NT_167190.1
Regulatory elements:
 SABiosciences Regulatory transcription factor binding sites in the AMOTL1 gene promoter:
E2F-3a E2F-4 NF-1 E2F-5 Pbx1a STAT5A LUN-1 E2F-2 E2F-1 E2F
Other transcription factors
Search SABiosciences Chromatin IP Primers for AMOTL1
Epigenetics:
| | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat AMOTL1 |
Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track
Entrez Gene cytogenetic band: 11q14.3 Ensembl cytogenetic band: 11q21 HGNC cytogenetic band: 11q21AMOTL1 Gene in genomic location: bands according to Ensembl, locations according to
 (and/or Entrez Gene and/or Ensembl if different)
GeneLoc information about chromosome 11 GeneLoc Exon Structure GeneLoc location for GC11P094441: view genomic region
(about GC identifiers)
Start:
|
94,439,597 bp from pter |
End:
|
94,609,918 bp from pter |
Size:
|
170,322 bases |
Orientation:
|
plus strand |
|
Proteins
for AMOTL1 gene
(According to
1UniProtKB,
HORDE,
neXtProt,
Ensembl,
and/or Reactome,
Modification sites according to 2PhosphoSitePlus,
Specific Peptides from DME,
Protein expression images according to data from SPIRE MOPED and PaxDb,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from
EMD Millipore,
R&D Systems,
GenScript,
Enzo Life Sciences,
OriGene,
Novus Biologicals,
Sino Biological,
ProSpec, and/or
Uscn,
Biochemical Assays by
EMD Millipore,
R&D Systems,
OriGene,
GenScript,
Cell Signaling Technology,
Enzo Life Sciences, and/or
Uscn,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene,
Antibodies by
EMD Millipore,
R&D Systems,
GenScript,
Cell Signaling Technology,
OriGene,
Novus Biologicals,
Thermo Fisher Scientific,
Abcam, and/or
Uscn)
About This Section
|
UniProtKB/Swiss-Prot: AMOL1_HUMAN, Q8IY63 (See
protein sequence)Recommended Name: Angiomotin-like protein 1 Size: 956 amino acids; 106574 Da
Subcellular location: Cell junction, tight junction (By similarity)
Sequence caution: Sequence=BAB84910.1; Type=Erroneous initiation; Note=Translation N-terminally shortened;Sequence=BAB84910.1; Type=Frameshift; Positions=592, 944;
Secondary accessions: Q63HK7 Q8NDN0 Q8TEN8 Q8WXD1 Q96CM5Alternative splicing: 2 isoforms: Q8IY63-1 Q8IY63-2 (No experimental confirmation available)Explore the universe of human proteins at neXtProt for AMOTL1: NX_Q8IY63
Post-translational modifications:
Polyubiquitinated by NEDD4, leading to proteasomal degradation1
View modification sites using PhosphoSitePlus2View neXtProt modification sites for NX_Q8IY63
AMOTL1 Protein expression data from MOPED and PaxDb: About this image 
REFSEQ proteins: NP_570899.1
ENSEMBL proteins: ENSP00000299004 ENSP00000320968 ENSP00000387739 ENSP00000323474 Reactome Protein details: Q8IY63
Human Recombinant Protein Products:
Gene Ontology (GO): 5/8 cellular component terms (GO ID links to tree view) (see all 8): About this table
AMOTL1 for ontologies About GeneDecksing
AMOTL1 Antibody Products:
Assay Products for AMOTL1: |
Protein
Domains /
Families
for AMOTL1 gene(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
|
AMOTL1 for domains About GeneDecksing
2 InterPro domains/families:Graphical View of Domain Structure for InterPro Entry Q8IY63ProtoNet protein and cluster: Q8IY63 UniProtKB/Swiss-Prot: AMOL1_HUMAN, Q8IY63Similarity: Belongs to the angiomotin family |
Function
for AMOTL1 gene
(According to 1UniProtKB,
Genatlas,
LifeMap Discovery™,
IUBMB, and/or
2DME,
Human phenotypes from GenomeRNAi,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene,
RNAi from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
microRNA from QIAGEN,
Gene Editing from DNA2.0,
Clones from EMD Millipore,
OriGene,
SwitchGear Genomics,
GenScript,
Sino Biological,
DNA2.0,
and Vector BioLabs,
Cell Lines from GenScript,
LifeMap BioReagents,
In Situ Hybridization Assays from Advanced Cell Diagnostics,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene.)
About This Section
|
Function Summary:
UniProtKB/Swiss-Prot: AMOL1_HUMAN, Q8IY63Function: Inhibits the Wnt/beta-catenin signaling pathway, probably by recruiting CTNNB1 to recycling endosomes andhence preventing its translocation to the nucleus
Clone
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In Situ Assay
Products: |
 | Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for AMOTL1 |
Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view): About this table
AMOTL1 for ontologies About GeneDecksing
2 GenomeRNAi human phenotypes for AMOTL1:
Animal Models:
1 MGI mutant phenotype (inferred from 1 allele ) (MGI details for Amotl1):
AMOTL1 for phenotypes About GeneDecksing
|
Pathways & Interactions
for AMOTL1 gene
(Pathways according to
EMD Millipore,
R&D Systems,
Cell Signaling Technology,
KEGG,
PharmGKB,
BioSystems,
Reactome,
Tocris Bioscience,
GeneGo (Thomson Reuters),
QIAGEN,
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Interaction Networks according to
SABiosciences,
and/or STRING,
Interactions according to 1UniProtKB,
2MINT,
3I2D, and/or
4STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene).
About This Section
|
Unified GeneCards pathways About this table
See pathways by source
| Super-pathway | contained gene-specific pathways |
|---|
| 1 | Signaling by Hippo | | | 2 | Tight junction | | | 3 | Signaling by GPCR | |
Pathway sources
See GeneCards unified pathways
Show all pathways
2 
Reactome Pathways for AMOTL1
1 
Kegg Pathway (Kegg details for AMOTL1):
AMOTL1 for pathways About GeneDecksing
Interactions:
Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for AMOTL1
STRING Interaction
Network Preview (showing 5 interactants - click image to see 17)
5/43 Interacting proteins for AMOTL1 (Q8IY633 ENSP000003877394) via UniProtKB, MINT, STRING, and/or I2D (see all 43)About this table
Gene Ontology (GO): 4 biological process terms (GO ID links to tree view): About this table | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0003365 | establishment of cell polarity involved in ameboidal cell migration |
IEA | -- | | GO:0016055 | Wnt receptor signaling pathway |
IEA | -- | | GO:0035329 | hippo signaling cascade |
TAS | -- | | GO:0043536 | positive regulation of blood vessel endothelial cell migration |
IEA | -- |
AMOTL1 for ontologies About GeneDecksing
|
Drugs & Compounds
for AMOTL1 gene(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
EMD Millipore, Tocris Bioscience
HMDB,
BitterDB, and/or
Novoseek, and Drugs according to
DrugBank,
Enzo Life Sciences, and/or
PharmGKB, with drugs/clinical trials/news
search links to CenterWatch)
About This Section
|
 Browse Tocris compounds for AMOTL1
Search CenterWatch for drugs/clinical trials and news about AMOTL1 / AMOL1
|
Transcripts
for AMOTL1 gene(Secondary structures according to
fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
transcript ids from Ensembl
with links to UCSC,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
shRNA from
OriGene,
microRNA from QIAGEN,
Tagged/untagged cDNA clones from
OriGene,
SwitchGear Genomics,
GenScript,
DNA2.0,
Vector BioLabs,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN
)
About This Section
|
REFSEQ mRNAs for AMOTL1 gene: NM_130847.2 Unigene Cluster for AMOTL1: Angiomotin like 1 Hs.503594 [show with all ESTs]Unigene Representative Sequence: NM_1308476 Ensembl transcripts including schematic representations, and UCSC links where relevant: ENST00000299004 ENST00000317829(uc001pfc.3) ENST00000433060(uc001pfb.3)
ENST00000539727 ENST00000537191 ENST00000317837
Clone
Products: | | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for AMOTL1 (see all 2)
OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for AMOTL1
OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling
| | | GenScript: all cDNA clones in your preferred vector: AMOTL1 (NM_130847) | | | DNA2.0 Custom Codon Optimized Gene
Synthesis Service for AMOTL1 | | | Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat AMOTL1 |
Additional cDNA sequence: AF453742.1 AK024350.1 AK074084.1 AK093699.1 AL137281.1 AL833833.1 BC014126.1 BC018449.1 BC037539.1 BC040683.1 BX648729.1 10 DOTS entries: DT.100023519 DT.100754811 DT.114128 DT.427083 DT.99945160 DT.100653232 DT.120701240 DT.40235380 DT.95087006 DT.95303141 24/227 AceView cDNA sequences (see all 227): AL833833 AW104507 AW513418 AA406411 BG413535 CA444666 AI678514 R38943 BQ068921 BX648729 CA389308 AI127681 BC014126 AU137395 BQ898573 BI335802 AI207003 BC040683 BE048181 BQ691630 BU621614 BX456739 AI283962 BE350493
GeneLoc Exon Structure
|
Expression
for AMOTL1 gene
(RNA expression data according to
H-InvDB,
NONCODE,
miRBase, and
RNAdb,
Expression images according to data from
BioGPS,
Illumina Human BodyMap, and
CGAP
SAGE,
Sets of similar genes according to GeneDecks,
in vivo and in vitro expression data from LifeMap Discovery™,
plus additional links to
Genevestigator, and/or
SOURCE, and/or
BioGPS, and/or
UniProtKB,
PCR Arrays from
SABiosciences,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN,
In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section
| AMOTL1 expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS
CGAP TAG: GCCATACAGC
About this image
See AMOTL1 Protein Expression from SPIRE MOPED and PaxDB
Genevestigator expression for AMOTL1
SOURCE GeneReport for Unigene cluster: Hs.503594
SABiosciences Expression via Pathway-Focused PCR Array including AMOTL1:
Primer
Products: | | OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for AMOTL1
Browse OriGene validated miRNA SYBR primer pairs
| | | SABiosciences RT2 qPCR Primer Assay in human, mouse, rat AMOTL1 | | | QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat AMOTL1 | | | QIAGEN QuantiFast Probe-based Assays in human, mouse, rat AMOTL1 | In Situ
Assay Products: |
| Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for AMOTL1 |
Orthologs
for AMOTL1 gene
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
,
5MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase,
and/or
6Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam)
About This Section
|
This gene was present in the common ancestor of animals.
Orthologs for AMOTL1 gene from 6/16 species (see all 16) About this table
| Organism |
Taxonomic
classification |
Gene |
Description |
Human
Similarity |
Orthology
Type |
Details |
chicken
(Gallus gallus) |
Aves |
AMOTL11 |
angiomotin like 1 |
74.79(n)
76.06(a) |
|
428091 XM_425649.3 XP_425649.3 |
lizard
(Anolis carolinensis) |
Reptilia |
AMOTL16 |
-- |
71(a) |
1 ↔ 1 |
3(195638764-195680479) |
African clawed frog
(Xenopus laevis) |
Amphibia |
Xl.156762 |
Xenopus laevis transcribed sequences |
77.9(n) |
|
BJ029965.1 |
zebrafish
(Danio rerio) |
Actinopterygii |
CABZ01086041.16 |
-- |
38(a) |
1 ↔ 1 |
15(2812421-2833330) |
honey bee
(Apis mellifera) |
Insecta |
-- |
-- |
19(a) |
1 → many |
Group11.14(37396-42844) |
worm
(Caenorhabditis elegans) |
Secernentea |
F59C12.36 |
Protein F59C12.3 |
22(a) |
1 → many |
X(16603313-16609451) |
ENSEMBL Gene Tree for AMOTL1 (if available)
TreeFam Gene Tree for AMOTL1 (if available) |
Paralogs
for AMOTL1 gene(Paralogs according to
1HomoloGene,
2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
About This Section
| Paralogs for AMOTL1 gene
- AMOTL22 AMOT2
2 SIMAP similar genes for AMOTL1 using alignment to 3 protein entries: AMOL1_HUMAN (see all proteins):AMOT AMOTL2
AMOTL1 for paralogs About GeneDecksing
|
Genomic Variants
for AMOTL1 gene(SNPs/Variants according to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE,
UniProtKB, and
DNA2.0,
Linkage Disequilibrium by HapMap,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB), Blood group antigen gene mutations by BGMUT,
Resequencing Primers from QIAGEN,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
About This Section
|
| Genomic Data | Transcription Related Data | Allele Frequencies | | SNP ID | Valid | Clinical
significance | Chr 11 pos | Sequence | # | AA
Chg | Type | More | # | Allele
freq | Pop | Total
sample | More |
|---|
HapMap Linkage Disequilibrium report for AMOTL1 (94439597 - 94609918 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
Database of Genomic Variants (DGV): 1 variation for AMOTL1
1 Inversion: 59700 | SABiosciences Cancer Mutation PCR Assays |
| | QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing AMOTL1 |
|
Disorders
/ Diseases
for AMOTL1 gene
(in which this Gene is Involved, According to MalaCards,
OMIM, UniProtKB,
the University of Copenhagen DISEASES
database,
Genatlas, GeneTests,
GAD,
HuGE Navigator,
and/or TGDB.)
About This Section
|
AMOTL1 for disorders About GeneDecksing
OMIM gene information: 614657
OMIM disorders: --
4  diseases for AMOTL1: About MalaCardsconduct disorder mumps adhd breast cancer
Export disorders for AMOTL1 gene to outside databases
|
Publications
for AMOTL1 gene (in
PubMed.
Associations of this gene to articles via
1Entrez Gene,
2UniProtKB/Swiss-Prot,
3HGNC,
4GAD,
5PharmGKB,
6HMDB,
7DrugBank,
8UniProtKB/TrEMBL,
9 Novoseek, and/or
10fRNAdb)
About This Section
|
PubMed articles for AMOTL1 gene, integrated from 9 sources (see all 35):
(articles sorted by number of sources associating them with AMOTL1) | |  | Utopia: connect your pdf to the dynamic
world of online information |
- Angiomotin belongs to a novel protein family with conserved coiled- coil and PDZ binding domains. (PubMed id 12406577)1, 2, 9 Bratt A.... Holmgren L. (2002)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
- JEAP, a novel component of tight junctions in exocrine cells. (PubMed id 11733531)1, 3 Nishimura M....Takai Y. (2002)
- Human angiomotin-like 1 associates with an angiomotin protein complex through its coiled-coil domain and induces the remodeling of t he actin cytoskeleton. (PubMed id 19565639)1, 9 GagnAc V....Fernandes M.J. (2009)
- The Amotl2 gene inhibits Wnt/beta-catenin signaling and regulates embryonic development in zebrafish. (PubMed id 22362771)2 Li Z.... Meng A. (2012)
- YAP1 recruits c-Abl to protect angiomotin-like 1 from Nedd4-mediated degradation. (PubMed id 22558212)1 Skouloudaki K. and Walz G. (2012)
- The Nedd4-like ubiquitin E3 ligases target angiomotin/ p130 to ubiquitin-dependent degradation. (PubMed id 22385262)2 Wang C....Yu L. (2012)
- Opposing roles of angiomotin-like-1 and zona occludens -2 on pro-apoptotic function of YAP. (PubMed id 21685940)1 Oka T....Sudol M. (2012)
- A proteome-wide, quantitative survey of in vivo ubiqui tylation sites reveals widespread regulatory roles. (PubMed id 21890473)1 Wagner S.A....Choudhary C. (2011)
- Mass spectrometric analysis of lysine ubiquitylation r eveals promiscuity at site level. (PubMed id 21139048)1 Danielsen J.M....Nielsen M.L. (2011)
|
External Searches for AMOTL1 gene
(in PubMed,
OMIM, and NCBI Bookshelf)
About This Section
|
|
Genome Databases showing AMOTL1 gene
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
Kegg,
and/or
H-InvDB)
About This Section
|
|
Other Databases showing AMOTL1 gene
(According to HUGE)
About This Section
| -- |
Specialized Databases showing AMOTL1 gene(According to PharmGKB,
ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section
|
| Name | Description |
| PharmGKB entry for AMOTL1 | Pharmacogenomics, SNPs, Pathways |
|
| | |
About This Section
| Patent Information for AMOTL1 gene:
Search GeneIP for patents involving AMOTL1
GeneCards and IP:
Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
|
Products
for AMOTL1 gene(Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or
Enzo Life Sciences),
In Situ Hybridization Assays from
Advanced Cell Diagnostics
About This Section
|
 | |
 | |
 |
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| | | QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat AMOTL1 | | | QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing AMOTL1 | | | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat AMOTL1 | | | QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat AMOTL1 | | | QIAGEN QuantiFast Probe-based Assays in human, mouse, rat AMOTL1 | | | QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat AMOTL1 |
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